RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 A0A087WWV3 80 aa34.29■■■■□ 3.08
CSNK1E-206ENST00000413574 PPP6R2O75170 966 aa34.29■■■■□ 3.08
CSNK1E-206ENST00000413574 STBD1O95210 358 aa34.29■■■■□ 3.08
CSNK1E-206ENST00000413574 RTP1P59025 263 aa34.29■■■■□ 3.08
CSNK1E-206ENST00000413574 ZNF200P98182 395 aaPredicted RBP34.29■■■■□ 3.08
CSNK1E-206ENST00000413574 ECM1Q16610 540 aa34.29■■■■□ 3.08
CSNK1E-206ENST00000413574 KRI1Q8N9T8 703 aaKnown RBP34.29■■■■□ 3.08
CSNK1E-206ENST00000413574 SNX29Q8TEQ0 813 aa34.29■■■■□ 3.08
CSNK1E-206ENST00000413574 LEO1Q8WVC0 666 aaPredicted RBP34.29■■■■□ 3.08
CSNK1E-206ENST00000413574 GDPD2Q9HCC8 539 aa34.29■■■■□ 3.08
CSNK1E-206ENST00000413574 GTF2IRD1Q9UHL9 959 aa34.29■■■■□ 3.08
CSNK1E-206ENST00000413574 ATP11BQ9Y2G3 1177 aa34.29■■■■□ 3.08
CSNK1E-206ENST00000413574 ZBTB39O15060 712 aa34.28■■■■□ 3.08
CSNK1E-206ENST00000413574 PQBP1O60828 265 aaKnown RBP34.28■■■■□ 3.08
CSNK1E-206ENST00000413574 OATP04181 439 aa34.28■■■■□ 3.08
CSNK1E-206ENST00000413574 INSRRP14616 1297 aa34.28■■■■□ 3.08
CSNK1E-206ENST00000413574 CCT6AP40227 531 aaKnown RBP34.28■■■■□ 3.08
CSNK1E-206ENST00000413574 GDF6Q6KF10 455 aaPredicted RBP34.28■■■■□ 3.08
CSNK1E-206ENST00000413574 TRAPPC12Q8WVT3 735 aa34.28■■■■□ 3.08
CSNK1E-206ENST00000413574 ZSWIM4Q9H7M6 989 aa34.28■■■■□ 3.08
CSNK1E-206ENST00000413574 TRMT13Q9NUP7 481 aaKnown RBP34.28■■■■□ 3.08
CSNK1E-206ENST00000413574 LONP1P36776 959 aaKnown RBP34.27■■■■□ 3.08
CSNK1E-206ENST00000413574 C1orf53Q5VUE5 145 aa34.27■■■■□ 3.08
CSNK1E-206ENST00000413574 USP49Q70CQ1 688 aa34.27■■■■□ 3.08
CSNK1E-206ENST00000413574 NEK9Q8TD19 979 aa34.27■■■■□ 3.08
CSNK1E-206ENST00000413574 KCNG4Q8TDN1 519 aa34.27■■■■□ 3.08
CSNK1E-206ENST00000413574 TNPO1Q92973 898 aaKnown RBP34.27■■■■□ 3.08
CSNK1E-206ENST00000413574 SPATA32Q96LK8 384 aa34.27■■■■□ 3.08
CSNK1E-206ENST00000413574 SH2D3AQ9BRG2 576 aa34.27■■■■□ 3.08
CSNK1E-206ENST00000413574 POLR3CQ9BUI4 534 aaPredicted RBP34.27■■■■□ 3.08
CSNK1E-206ENST00000413574 TRPV6Q9H1D0 765 aa34.27■■■■□ 3.08
CSNK1E-206ENST00000413574 RPA1P27694 616 aa34.26■■■■□ 3.08
CSNK1E-206ENST00000413574 IGBP1P78318 339 aa34.26■■■■□ 3.08
CSNK1E-206ENST00000413574 TLE2Q04725 743 aa34.26■■■■□ 3.08
CSNK1E-206ENST00000413574 PPFIA1Q13136 1202 aa34.26■■■■□ 3.08
CSNK1E-206ENST00000413574 KRT79Q5XKE5 535 aa34.26■■■■□ 3.08
CSNK1E-206ENST00000413574 SESTD1Q86VW0 696 aa34.26■■■■□ 3.08
CSNK1E-206ENST00000413574 TUFT1Q9NNX1 390 aa34.26■■■■□ 3.08
CSNK1E-206ENST00000413574 B4GALT4O60513 344 aa34.26■■■■□ 3.07
CSNK1E-206ENST00000413574 ZRSR1Q15695 479 aaKnown RBP34.26■■■■□ 3.07
CSNK1E-206ENST00000413574 GRIK4Q16099 956 aa34.26■■■■□ 3.07
CSNK1E-206ENST00000413574 HAUS3Q68CZ6 603 aa34.26■■■■□ 3.07
CSNK1E-206ENST00000413574 POTEGQ6S5H5 508 aa34.26■■■■□ 3.07
CSNK1E-206ENST00000413574 C4orf19Q8IY42 314 aa34.26■■■■□ 3.07
CSNK1E-206ENST00000413574 LMBR1Q8WVP7 490 aa34.26■■■■□ 3.07
CSNK1E-206ENST00000413574 BBXQ8WY36 941 aaPredicted RBP34.26■■■■□ 3.07
CSNK1E-206ENST00000413574 ZBTB10Q96DT7 871 aa34.26■■■■□ 3.07
CSNK1E-206ENST00000413574 EPSTI1Q96J88 318 aa34.26■■■■□ 3.07
CSNK1E-206ENST00000413574 AK8Q96MA6 479 aa34.26■■■■□ 3.07
CSNK1E-206ENST00000413574 SEPT9Q9UHD8 586 aaPredicted RBP34.26■■■■□ 3.07
CSNK1E-206ENST00000413574 DDX11L8A8MPP1 907 aa34.25■■■■□ 3.07
CSNK1E-206ENST00000413574 HBP1O60381 514 aa34.25■■■■□ 3.07
CSNK1E-206ENST00000413574 ME1P48163 572 aa34.25■■■■□ 3.07
CSNK1E-206ENST00000413574 ANO5Q75V66 913 aa34.25■■■■□ 3.07
CSNK1E-206ENST00000413574 FAM126BQ8IXS8 530 aa34.25■■■■□ 3.07
CSNK1E-206ENST00000413574 PCDHA7Q9UN72 937 aa34.25■■■■□ 3.07
CSNK1E-206ENST00000413574 C17orf102A2RUQ5 167 aa34.24■■■■□ 3.07
CSNK1E-206ENST00000413574 ZBTB42B2RXF5 422 aa34.24■■■■□ 3.07
CSNK1E-206ENST00000413574 PTPN11Q06124 597 aaPredicted RBP34.24■■■■□ 3.07
CSNK1E-206ENST00000413574 XKR3Q5GH77 459 aa34.24■■■■□ 3.07
CSNK1E-206ENST00000413574 PLA2G4FQ68DD2 849 aa34.24■■■■□ 3.07
CSNK1E-206ENST00000413574 FAM167AQ96KS9 214 aa34.24■■■■□ 3.07
CSNK1E-206ENST00000413574 NRBP2Q9NSY0 501 aa34.24■■■■□ 3.07
CSNK1E-206ENST00000413574 TNRC18O15417 2968 aaPredicted RBP34.24■■■■□ 3.07
CSNK1E-206ENST00000413574 HOXC8P31273 242 aa34.23■■■■□ 3.07
CSNK1E-206ENST00000413574 ANKRD33Q7Z3H0 272 aa34.23■■■■□ 3.07
CSNK1E-206ENST00000413574 CABP7Q86V35 215 aa34.23■■■■□ 3.07
CSNK1E-206ENST00000413574 PIGOQ8TEQ8 1089 aa34.23■■■■□ 3.07
CSNK1E-206ENST00000413574 CTAGE1Q96RT6 745 aa34.23■■■■□ 3.07
CSNK1E-206ENST00000413574 PLIN2Q99541 437 aa34.23■■■■□ 3.07
CSNK1E-206ENST00000413574 NRCAMQ92823 1304 aa34.23■■■■□ 3.07
CSNK1E-206ENST00000413574 ARID2Q68CP9 1835 aa34.23■■■■□ 3.07
CSNK1E-206ENST00000413574 DKC1O60832 514 aaKnown RBP eCLIP34.22■■■■□ 3.07
CSNK1E-206ENST00000413574 YWHABP31946 246 aaKnown RBP34.22■■■■□ 3.07
CSNK1E-206ENST00000413574 PTGISQ16647 500 aa34.22■■■■□ 3.07
CSNK1E-206ENST00000413574 MARCH8Q5T0T0 291 aa34.22■■■■□ 3.07
CSNK1E-206ENST00000413574 AXDND1Q5T1B0 1012 aaPredicted RBP34.22■■■■□ 3.07
CSNK1E-206ENST00000413574 SYMPKQ92797 1274 aaKnown RBP34.22■■■■□ 3.07
CSNK1E-206ENST00000413574 SCAND2PQ9GZW5 306 aaPredicted RBP34.22■■■■□ 3.07
CSNK1E-206ENST00000413574 KIAA1024Q9UPX6 916 aa34.22■■■■□ 3.07
CSNK1E-206ENST00000413574 TREHO43280 583 aa34.22■■■■□ 3.07
CSNK1E-206ENST00000413574 UBA7P41226 1012 aa34.22■■■■□ 3.07
CSNK1E-206ENST00000413574 ZNF579Q8NAF0 562 aaKnown RBP34.22■■■■□ 3.07
CSNK1E-206ENST00000413574 SEZ6LQ9BYH1 1024 aa34.22■■■■□ 3.07
CSNK1E-206ENST00000413574 MROH7Q68CQ1 1323 aa34.22■■■■□ 3.07
CSNK1E-206ENST00000413574 CUTAO60888 179 aa34.21■■■■□ 3.07
CSNK1E-206ENST00000413574 LYPLA2O95372 231 aa34.21■■■■□ 3.07
CSNK1E-206ENST00000413574 CD4P01730 458 aa34.21■■■■□ 3.07
CSNK1E-206ENST00000413574 NPEPPSP55786 919 aa34.21■■■■□ 3.07
CSNK1E-206ENST00000413574 ADAM17P78536 824 aa34.21■■■■□ 3.07
CSNK1E-206ENST00000413574 MTERF2Q49AM1 385 aa34.21■■■■□ 3.07
CSNK1E-206ENST00000413574 PNMA5Q96PV4 448 aa34.21■■■■□ 3.07
CSNK1E-206ENST00000413574 HTATIP2Q9BUP3 242 aa34.21■■■■□ 3.07
CSNK1E-206ENST00000413574 NIFKQ9BYG3 293 aaKnown RBP34.21■■■■□ 3.07
CSNK1E-206ENST00000413574 DDX19AQ9NUU7 478 aaKnown RBP34.21■■■■□ 3.07
CSNK1E-206ENST00000413574 STK24Q9Y6E0 443 aa34.21■■■■□ 3.07
CSNK1E-206ENST00000413574 FAAP100Q0VG06 881 aa34.2■■■■□ 3.07
CSNK1E-206ENST00000413574 EVPLQ92817 2033 aa34.2■■■■□ 3.07
CSNK1E-206ENST00000413574 DCDC2CA8MYV0 355 aa34.19■■■■□ 3.06
CSNK1E-206ENST00000413574 GRB10Q13322 594 aa34.19■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms