RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 SALL3Q9BXA9 1300 aa5.21□□□□□ -1.58
SF3B1-202ENST00000409915 ECM29Q5VYK3 1845 aa5.2□□□□□ -1.58
SF3B1-202ENST00000409915 TRPM7Q96QT4 1865 aa5.2□□□□□ -1.58
SF3B1-202ENST00000409915 PAPPA2Q9BXP8 1791 aa5.2□□□□□ -1.58
SF3B1-202ENST00000409915 UQCRHLA0A096LP55 91 aa5.2□□□□□ -1.58
SF3B1-202ENST00000409915 UBE2Q2LH0YL09 131 aa5.2□□□□□ -1.58
SF3B1-202ENST00000409915 WIPF1O43516 503 aa5.2□□□□□ -1.58
SF3B1-202ENST00000409915 KIF1CO43896 1103 aaKnown RBP5.2□□□□□ -1.58
SF3B1-202ENST00000409915 MAN1A2O60476 641 aa5.2□□□□□ -1.58
SF3B1-202ENST00000409915 AOC2O75106 756 aa5.2□□□□□ -1.58
SF3B1-202ENST00000409915 UPP2O95045 317 aa5.2□□□□□ -1.58
SF3B1-202ENST00000409915 F13A1P00488 732 aa5.2□□□□□ -1.58
SF3B1-202ENST00000409915 UQCRHP07919 91 aa5.2□□□□□ -1.58
SF3B1-202ENST00000409915 ARAFP10398 606 aa5.2□□□□□ -1.58
SF3B1-202ENST00000409915 PDE6AP16499 860 aa5.2□□□□□ -1.58
SF3B1-202ENST00000409915 TYRP1P17643 537 aa5.2□□□□□ -1.58
SF3B1-202ENST00000409915 CAPN2P17655 700 aa5.2□□□□□ -1.58
SF3B1-202ENST00000409915 ATP5JP18859 108 aa5.2□□□□□ -1.58
SF3B1-202ENST00000409915 TFE3P19532 575 aaPredicted RBP5.2□□□□□ -1.58
SF3B1-202ENST00000409915 SDSP20132 328 aa5.2□□□□□ -1.58
SF3B1-202ENST00000409915 MX1P20591 662 aa5.2□□□□□ -1.58
SF3B1-202ENST00000409915 CYP7A1P22680 504 aa5.2□□□□□ -1.58
SF3B1-202ENST00000409915 L1CAMP32004 1257 aa5.2□□□□□ -1.58
SF3B1-202ENST00000409915 RENBPP51606 427 aa5.2□□□□□ -1.58
SF3B1-202ENST00000409915 HUNKP57058 714 aa5.2□□□□□ -1.58
SF3B1-202ENST00000409915 TMPRSS15P98073 1019 aa5.2□□□□□ -1.58
SF3B1-202ENST00000409915 MAP2K1Q02750 393 aaPredicted RBP5.2□□□□□ -1.58
SF3B1-202ENST00000409915 TLR1Q15399 786 aa5.2□□□□□ -1.58
SF3B1-202ENST00000409915 JAKMIP3Q5VZ66 844 aa5.2□□□□□ -1.58
SF3B1-202ENST00000409915 HGSNATQ68CP4 663 aa5.2□□□□□ -1.58
SF3B1-202ENST00000409915 CYP4F22Q6NT55 531 aa5.2□□□□□ -1.58
SF3B1-202ENST00000409915 PDXDC1Q6P996 788 aa5.2□□□□□ -1.58
SF3B1-202ENST00000409915 CYP2U1Q7Z449 544 aa5.2□□□□□ -1.58
SF3B1-202ENST00000409915 SAPCD2Q86UD0 394 aa5.2□□□□□ -1.58
SF3B1-202ENST00000409915 ZFPM1Q8IX07 1006 aa5.2□□□□□ -1.58
SF3B1-202ENST00000409915 LRRC47Q8N1G4 583 aaKnown RBP5.2□□□□□ -1.58
SF3B1-202ENST00000409915 PPM1KQ8N3J5 372 aa5.2□□□□□ -1.58
SF3B1-202ENST00000409915 CNTD1Q8N815 330 aa5.2□□□□□ -1.58
SF3B1-202ENST00000409915 SH3RF3Q8TEJ3 882 aaPredicted RBP5.2□□□□□ -1.58
SF3B1-202ENST00000409915 PARD3BQ8TEW8 1205 aa5.2□□□□□ -1.58
SF3B1-202ENST00000409915 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.2□□□□□ -1.58
SF3B1-202ENST00000409915 IRF7Q92985 503 aa5.2□□□□□ -1.58
SF3B1-202ENST00000409915 GCC1Q96CN9 775 aa5.2□□□□□ -1.58
SF3B1-202ENST00000409915 KLRG1Q96E93 195 aa5.2□□□□□ -1.58
SF3B1-202ENST00000409915 TEPSINQ96N21 525 aa5.2□□□□□ -1.58
SF3B1-202ENST00000409915 CLUHP3Q96NS8 147 aa5.2□□□□□ -1.58
SF3B1-202ENST00000409915 MYCBPQ99417 103 aaPredicted RBP5.2□□□□□ -1.58
SF3B1-202ENST00000409915 HAUS7Q99871 368 aa5.2□□□□□ -1.58
SF3B1-202ENST00000409915 OSGEPQ9NPF4 335 aa5.2□□□□□ -1.58
SF3B1-202ENST00000409915 RBM28Q9NW13 759 aaKnown RBP5.2□□□□□ -1.58
SF3B1-202ENST00000409915 TMEM63CQ9P1W3 806 aa5.2□□□□□ -1.58
SF3B1-202ENST00000409915 CALCOCO1Q9P1Z2 691 aa5.2□□□□□ -1.58
SF3B1-202ENST00000409915 STK17AQ9UEE5 414 aa5.2□□□□□ -1.58
SF3B1-202ENST00000409915 DNMT3LQ9UJW3 386 aa5.2□□□□□ -1.58
SF3B1-202ENST00000409915 PHTF1Q9UMS5 762 aa5.2□□□□□ -1.58
SF3B1-202ENST00000409915 LUC7L2Q9Y383 392 aaKnown RBP5.2□□□□□ -1.58
SF3B1-202ENST00000409915 DGKBQ9Y6T7 804 aa5.2□□□□□ -1.58
SF3B1-202ENST00000409915 DOCK2Q92608 1830 aa5.2□□□□□ -1.58
SF3B1-202ENST00000409915 ZNF532Q9HCE3 1301 aa5.2□□□□□ -1.58
SF3B1-202ENST00000409915 GPR75-ASB3A0A0A6YYF3 556 aa5.19□□□□□ -1.58
SF3B1-202ENST00000409915 BICDL2A1A5D9 508 aa5.19□□□□□ -1.58
SF3B1-202ENST00000409915 DDTLA6NHG4 134 aaPredicted RBP5.19□□□□□ -1.58
SF3B1-202ENST00000409915 UPK3BL1B0FP48 263 aa5.19□□□□□ -1.58
SF3B1-202ENST00000409915 UPK3BL2E5RIL1 263 aa5.19□□□□□ -1.58
SF3B1-202ENST00000409915 EREGO14944 169 aa5.19□□□□□ -1.58
SF3B1-202ENST00000409915 BRINP1O60477 761 aa5.19□□□□□ -1.58
SF3B1-202ENST00000409915 RHOBTB3O94955 611 aa5.19□□□□□ -1.58
SF3B1-202ENST00000409915 GNRH1P01148 92 aa5.19□□□□□ -1.58
SF3B1-202ENST00000409915 IMPDH2P12268 514 aa5.19□□□□□ -1.58
SF3B1-202ENST00000409915 BMP2P12643 396 aa5.19□□□□□ -1.58
SF3B1-202ENST00000409915 TNFAIP3P21580 790 aa5.19□□□□□ -1.58
SF3B1-202ENST00000409915 NF2P35240 595 aa5.19□□□□□ -1.58
SF3B1-202ENST00000409915 GSTO1P78417 241 aa5.19□□□□□ -1.58
SF3B1-202ENST00000409915 NUCB1Q02818 461 aa5.19□□□□□ -1.58
SF3B1-202ENST00000409915 MAP3K12Q12852 859 aa5.19□□□□□ -1.58
SF3B1-202ENST00000409915 TNFAIP1Q13829 316 aa5.19□□□□□ -1.58
SF3B1-202ENST00000409915 GBX1Q14549 363 aa5.19□□□□□ -1.58
SF3B1-202ENST00000409915 GRM3Q14832 879 aa5.19□□□□□ -1.58
SF3B1-202ENST00000409915 ZKSCAN8Q15776 578 aaPredicted RBP5.19□□□□□ -1.58
SF3B1-202ENST00000409915 DEFB115Q30KQ5 88 aa5.19□□□□□ -1.58
SF3B1-202ENST00000409915 SLC9C2Q5TAH2 1124 aa5.19□□□□□ -1.58
SF3B1-202ENST00000409915 SYDE2Q5VT97 1194 aa5.19□□□□□ -1.58
SF3B1-202ENST00000409915 FOXB2Q5VYV0 432 aa5.19□□□□□ -1.58
SF3B1-202ENST00000409915 PPP4R3AQ6IN85 833 aa5.19□□□□□ -1.58
SF3B1-202ENST00000409915 PDE12Q6L8Q7 609 aaKnown RBP5.19□□□□□ -1.58
SF3B1-202ENST00000409915 LVRNQ6Q4G3 990 aa5.19□□□□□ -1.58
SF3B1-202ENST00000409915 DTHD1Q6ZMT9 781 aa5.19□□□□□ -1.58
SF3B1-202ENST00000409915 BNC2Q6ZN30 1099 aaPredicted RBP5.19□□□□□ -1.58
SF3B1-202ENST00000409915 MIGA2Q7L4E1 593 aa5.19□□□□□ -1.58
SF3B1-202ENST00000409915 MAATS1Q7Z4T9 603 aa5.19□□□□□ -1.58
SF3B1-202ENST00000409915 KRT77Q7Z794 578 aa5.19□□□□□ -1.58
SF3B1-202ENST00000409915 CHD1LQ86WJ1 897 aa5.19□□□□□ -1.58
SF3B1-202ENST00000409915 MAPKAPK5Q8IW41 473 aa5.19□□□□□ -1.58
SF3B1-202ENST00000409915 TEX11Q8IYF3 940 aa5.19□□□□□ -1.58
SF3B1-202ENST00000409915 AHI1Q8N157 1196 aa5.19□□□□□ -1.58
SF3B1-202ENST00000409915 LCORLQ8N3X6 602 aa5.19□□□□□ -1.58
SF3B1-202ENST00000409915 DNAJC5GQ8N7S2 189 aa5.19□□□□□ -1.58
SF3B1-202ENST00000409915 C2orf69Q8N8R5 385 aa5.19□□□□□ -1.58
SF3B1-202ENST00000409915 RBBP8NLQ8NC74 664 aaPredicted RBP5.19□□□□□ -1.58
SF3B1-202ENST00000409915 COG1Q8WTW3 980 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms