RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 RUBCNQ92622 972 aa18.49■□□□□ 0.55
NUP50-203ENST00000407019 CCDC102AQ96A19 550 aa18.49■□□□□ 0.55
NUP50-203ENST00000407019 EXOC4Q96A65 974 aa18.49■□□□□ 0.55
NUP50-203ENST00000407019 HSD17B14Q9BPX1 270 aa18.49■□□□□ 0.55
NUP50-203ENST00000407019 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.49■□□□□ 0.55
NUP50-203ENST00000407019 RANBP17Q9H2T7 1088 aaKnown RBP18.49■□□□□ 0.55
NUP50-203ENST00000407019 VPS18Q9P253 973 aa18.49■□□□□ 0.55
NUP50-203ENST00000407019 N4BP1O75113 896 aaKnown RBP18.48■□□□□ 0.55
NUP50-203ENST00000407019 PSMD10O75832 226 aa18.48■□□□□ 0.55
NUP50-203ENST00000407019 AKAP3O75969 853 aa18.48■□□□□ 0.55
NUP50-203ENST00000407019 PAFAH1B1P43034 410 aa18.48■□□□□ 0.55
NUP50-203ENST00000407019 GYS2P54840 703 aa18.48■□□□□ 0.55
NUP50-203ENST00000407019 PPP2R5CQ13362 524 aa18.48■□□□□ 0.55
NUP50-203ENST00000407019 DLGAP5Q15398 846 aa18.48■□□□□ 0.55
NUP50-203ENST00000407019 NAB2Q15742 525 aa18.48■□□□□ 0.55
NUP50-203ENST00000407019 DCAF17Q5H9S7 520 aaPredicted RBP18.48■□□□□ 0.55
NUP50-203ENST00000407019 FAM71BQ8TC56 605 aa18.48■□□□□ 0.55
NUP50-203ENST00000407019 SLC5A5Q92911 643 aa18.48■□□□□ 0.55
NUP50-203ENST00000407019 TLR10Q9BXR5 811 aa18.48■□□□□ 0.55
NUP50-203ENST00000407019 MED4Q9NPJ6 270 aa18.48■□□□□ 0.55
NUP50-203ENST00000407019 ADAM21Q9UKJ8 722 aa18.48■□□□□ 0.55
NUP50-203ENST00000407019 A0A087X0T9 212 aa18.48■□□□□ 0.55
NUP50-203ENST00000407019 ZMYND10O75800 440 aa18.48■□□□□ 0.55
NUP50-203ENST00000407019 FAM13AO94988 1023 aa18.48■□□□□ 0.55
NUP50-203ENST00000407019 FAM228BP0C875 321 aa18.48■□□□□ 0.55
NUP50-203ENST00000407019 ACTN1P12814 892 aa18.48■□□□□ 0.55
NUP50-203ENST00000407019 SLC9A1P19634 815 aa18.48■□□□□ 0.55
NUP50-203ENST00000407019 CXCR5P32302 372 aa18.48■□□□□ 0.55
NUP50-203ENST00000407019 EXOC3L4Q17RC7 722 aa18.48■□□□□ 0.55
NUP50-203ENST00000407019 ZNF772Q68DY9 489 aaPredicted RBP18.48■□□□□ 0.55
NUP50-203ENST00000407019 CCNI2Q6ZMN8 369 aaPredicted RBP18.48■□□□□ 0.55
NUP50-203ENST00000407019 TPH2Q8IWU9 490 aa18.48■□□□□ 0.55
NUP50-203ENST00000407019 PIGOQ8TEQ8 1089 aa18.48■□□□□ 0.55
NUP50-203ENST00000407019 DYDC2Q96IM9 177 aa18.48■□□□□ 0.55
NUP50-203ENST00000407019 PSMB7Q99436 277 aa18.48■□□□□ 0.55
NUP50-203ENST00000407019 PSD3Q9NYI0 1048 aa18.48■□□□□ 0.55
NUP50-203ENST00000407019 MRPL11Q9Y3B7 192 aaKnown RBP18.48■□□□□ 0.55
NUP50-203ENST00000407019 PSME4Q14997 1843 aa18.47■□□□□ 0.55
NUP50-203ENST00000407019 EIF3DO15371 548 aaKnown RBP eCLIP18.47■□□□□ 0.55
NUP50-203ENST00000407019 CHMP2AO43633 222 aa18.47■□□□□ 0.55
NUP50-203ENST00000407019 UCHL3P15374 230 aa18.47■□□□□ 0.55
NUP50-203ENST00000407019 PRELPP51888 382 aa18.47■□□□□ 0.55
NUP50-203ENST00000407019 ENOX2Q16206 610 aaKnown RBP18.47■□□□□ 0.55
NUP50-203ENST00000407019 DPY19L2P1Q6NXN4 242 aa18.47■□□□□ 0.55
NUP50-203ENST00000407019 SPAG5Q96R06 1193 aa18.47■□□□□ 0.55
NUP50-203ENST00000407019 ADAMTS1Q9UHI8 967 aa18.47■□□□□ 0.55
NUP50-203ENST00000407019 CNTNAP1P78357 1384 aa18.47■□□□□ 0.55
NUP50-203ENST00000407019 GAS7O60861 476 aa18.46■□□□□ 0.55
NUP50-203ENST00000407019 SLITRK3O94933 977 aa18.46■□□□□ 0.55
NUP50-203ENST00000407019 KLRC1P26715 233 aa18.46■□□□□ 0.55
NUP50-203ENST00000407019 PON1P27169 355 aa18.46■□□□□ 0.55
NUP50-203ENST00000407019 SLC30A10Q6XR72 485 aa18.46■□□□□ 0.55
NUP50-203ENST00000407019 VCPKMTQ9H867 229 aa18.46■□□□□ 0.55
NUP50-203ENST00000407019 POLD4Q9HCU8 107 aa18.46■□□□□ 0.55
NUP50-203ENST00000407019 HPCAL4Q9UM19 191 aa18.46■□□□□ 0.55
NUP50-203ENST00000407019 FAN1Q9Y2M0 1017 aa18.46■□□□□ 0.55
NUP50-203ENST00000407019 BZW2Q9Y6E2 419 aaKnown RBP18.46■□□□□ 0.55
NUP50-203ENST00000407019 CLIC2O15247 247 aa18.46■□□□□ 0.55
NUP50-203ENST00000407019 PALMO75781 387 aa18.46■□□□□ 0.55
NUP50-203ENST00000407019 AARSP49588 968 aaKnown RBP eCLIP18.46■□□□□ 0.55
NUP50-203ENST00000407019 EPHA7Q15375 998 aa18.46■□□□□ 0.55
NUP50-203ENST00000407019 SLC15A2Q16348 729 aa18.46■□□□□ 0.55
NUP50-203ENST00000407019 KIAA0753Q2KHM9 967 aa18.46■□□□□ 0.55
NUP50-203ENST00000407019 SPDYE2Q495Y8 402 aa18.46■□□□□ 0.55
NUP50-203ENST00000407019 TCERG1LQ5VWI1 586 aa18.46■□□□□ 0.55
NUP50-203ENST00000407019 C1orf186Q6ZWK4 172 aa18.46■□□□□ 0.55
NUP50-203ENST00000407019 FAM160B2Q86V87 743 aa18.46■□□□□ 0.55
NUP50-203ENST00000407019 GSPT2Q8IYD1 628 aaKnown RBP18.46■□□□□ 0.55
NUP50-203ENST00000407019 MYCT1Q8N699 235 aa18.46■□□□□ 0.55
NUP50-203ENST00000407019 LRRC1Q9BTT6 524 aa18.46■□□□□ 0.55
NUP50-203ENST00000407019 BCAS3Q9H6U6 928 aa18.46■□□□□ 0.55
NUP50-203ENST00000407019 RNF14Q9UBS8 474 aa18.46■□□□□ 0.55
NUP50-203ENST00000407019 TNS1Q9HBL0 1735 aaKnown RBP18.46■□□□□ 0.55
NUP50-203ENST00000407019 KIF13BQ9NQT8 1826 aa18.45■□□□□ 0.54
NUP50-203ENST00000407019 A0A0U1RQG5 324 aaPredicted RBP18.45■□□□□ 0.54
NUP50-203ENST00000407019 SFI1A8K8P3 1242 aa18.45■□□□□ 0.54
NUP50-203ENST00000407019 PLA2G6O60733 806 aa18.45■□□□□ 0.54
NUP50-203ENST00000407019 RAD17O75943 681 aa18.45■□□□□ 0.54
NUP50-203ENST00000407019 VIL1P09327 827 aaKnown RBP18.45■□□□□ 0.54
NUP50-203ENST00000407019 MYBL2P10244 700 aa18.45■□□□□ 0.54
NUP50-203ENST00000407019 MUTP22033 750 aa18.45■□□□□ 0.54
NUP50-203ENST00000407019 CASP4P49662 377 aa18.45■□□□□ 0.54
NUP50-203ENST00000407019 UBXN2AP68543 259 aa18.45■□□□□ 0.54
NUP50-203ENST00000407019 KCNA1Q09470 495 aa18.45■□□□□ 0.54
NUP50-203ENST00000407019 GRIPAP1Q4V328 841 aa18.45■□□□□ 0.54
NUP50-203ENST00000407019 C10orf76Q5T2E6 689 aa18.45■□□□□ 0.54
NUP50-203ENST00000407019 GBP6Q6ZN66 633 aa18.45■□□□□ 0.54
NUP50-203ENST00000407019 OGFOD1Q8N543 542 aa18.45■□□□□ 0.54
NUP50-203ENST00000407019 GMLQ99445 158 aa18.45■□□□□ 0.54
NUP50-203ENST00000407019 SELENOOQ9BVL4 669 aa18.45■□□□□ 0.54
NUP50-203ENST00000407019 SMARCAL1Q9NZC9 954 aa18.45■□□□□ 0.54
NUP50-203ENST00000407019 EHD2Q9NZN4 543 aa18.45■□□□□ 0.54
NUP50-203ENST00000407019 PCDHGC5Q9Y5F6 944 aa18.45■□□□□ 0.54
NUP50-203ENST00000407019 RGPD3A6NKT7 1758 aaPredicted RBP18.45■□□□□ 0.54
NUP50-203ENST00000407019 RGPD4Q7Z3J3 1758 aa18.45■□□□□ 0.54
NUP50-203ENST00000407019 FRMPD4Q14CM0 1322 aa18.45■□□□□ 0.54
NUP50-203ENST00000407019 SETQ01105 290 aaPredicted RBP18.45■□□□□ 0.54
NUP50-203ENST00000407019 EZH2Q15910 746 aaKnown RBP18.45■□□□□ 0.54
NUP50-203ENST00000407019 ZYXQ15942 572 aaKnown RBP18.45■□□□□ 0.54
NUP50-203ENST00000407019 CEP55Q53EZ4 464 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms