RNA–Protein interactions for RNA: ENST00000399355.6

ITSN1-211, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-211ENST00000399355 COL20A1Q9P218 1284 aa12.91□□□□□ -0.34
ITSN1-211ENST00000399355 LAD1O00515 517 aa12.91□□□□□ -0.34
ITSN1-211ENST00000399355 KCNK3O14649 394 aa12.91□□□□□ -0.34
ITSN1-211ENST00000399355 KRT83P78385 493 aa12.91□□□□□ -0.34
ITSN1-211ENST00000399355 WHAMMP3Q1A5X7 153 aa12.91□□□□□ -0.34
ITSN1-211ENST00000399355 PAPD7Q5XG87 772 aaKnown RBP12.91□□□□□ -0.34
ITSN1-211ENST00000399355 TMEM130Q8N3G9 435 aa12.91□□□□□ -0.34
ITSN1-211ENST00000399355 MYCT1Q8N699 235 aa12.91□□□□□ -0.34
ITSN1-211ENST00000399355 EIF2AK1Q9BQI3 630 aaKnown RBP12.91□□□□□ -0.34
ITSN1-211ENST00000399355 DDX47Q9H0S4 455 aaKnown RBP12.91□□□□□ -0.34
ITSN1-211ENST00000399355 EPB41L5Q9HCM4 733 aa12.91□□□□□ -0.34
ITSN1-211ENST00000399355 TRPC5Q9UL62 973 aaPredicted RBP12.91□□□□□ -0.34
ITSN1-211ENST00000399355 VCANP13611 3396 aa12.9□□□□□ -0.34
ITSN1-211ENST00000399355 USP8P40818 1118 aa12.9□□□□□ -0.34
ITSN1-211ENST00000399355 IRX5P78411 483 aaPredicted RBP12.9□□□□□ -0.34
ITSN1-211ENST00000399355 PRPF4BQ13523 1007 aaKnown RBP12.9□□□□□ -0.34
ITSN1-211ENST00000399355 GALNT17Q6IS24 598 aa12.9□□□□□ -0.34
ITSN1-211ENST00000399355 DEFB132Q7Z7B7 95 aa12.9□□□□□ -0.34
ITSN1-211ENST00000399355 GLYCTKQ8IVS8 523 aa12.9□□□□□ -0.34
ITSN1-211ENST00000399355 BTBD6Q96KE9 485 aa12.9□□□□□ -0.34
ITSN1-211ENST00000399355 CRAMP1Q96RY5 1269 aa12.9□□□□□ -0.34
ITSN1-211ENST00000399355 TMEM110-MUSTN1A8MSY1 372 aa12.9□□□□□ -0.34
ITSN1-211ENST00000399355 DHX9Q08211 1270 aaKnown RBP12.9□□□□□ -0.34
ITSN1-211ENST00000399355 HAUS3Q68CZ6 603 aa12.9□□□□□ -0.34
ITSN1-211ENST00000399355 SPAG5Q96R06 1193 aa12.9□□□□□ -0.34
ITSN1-211ENST00000399355 KCNMB3Q9NPA1 279 aa12.9□□□□□ -0.34
ITSN1-211ENST00000399355 MAST2Q6P0Q8 1798 aa12.9□□□□□ -0.34
ITSN1-211ENST00000399355 HOOK2Q96ED9 719 aa12.9□□□□□ -0.35
ITSN1-211ENST00000399355 WDR11Q9BZH6 1224 aa12.9□□□□□ -0.35
ITSN1-211ENST00000399355 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.9□□□□□ -0.352e-7■■■■■ 28.2
ITSN1-211ENST00000399355 PI4KBQ9UBF8 816 aa12.9□□□□□ -0.35
ITSN1-211ENST00000399355 FOXO6A8MYZ6 492 aa12.89□□□□□ -0.35
ITSN1-211ENST00000399355 TRIM14Q14142 442 aa12.89□□□□□ -0.35
ITSN1-211ENST00000399355 BRD3Q15059 726 aa12.89□□□□□ -0.35
ITSN1-211ENST00000399355 ASTE1Q2TB18 679 aaPredicted RBP12.89□□□□□ -0.35
ITSN1-211ENST00000399355 SFMBT2Q5VUG0 894 aa12.89□□□□□ -0.35
ITSN1-211ENST00000399355 TRIM59Q8IWR1 403 aa12.89□□□□□ -0.35
ITSN1-211ENST00000399355 ASTN1O14525 1302 aa12.89□□□□□ -0.35
ITSN1-211ENST00000399355 GRID2IPA4D2P6 1211 aa12.89□□□□□ -0.35
ITSN1-211ENST00000399355 PLCB1Q9NQ66 1216 aa12.89□□□□□ -0.35
ITSN1-211ENST00000399355 GCNT4Q9P109 453 aa12.89□□□□□ -0.35
ITSN1-211ENST00000399355 BMP3P12645 472 aa12.89□□□□□ -0.35
ITSN1-211ENST00000399355 PLA2G4FQ68DD2 849 aa12.89□□□□□ -0.35
ITSN1-211ENST00000399355 LMBRD2Q68DH5 695 aaPredicted RBP12.89□□□□□ -0.35
ITSN1-211ENST00000399355 NEUROG2Q9H2A3 272 aa12.89□□□□□ -0.35
ITSN1-211ENST00000399355 TGFB1I1O43294 461 aa12.88□□□□□ -0.35
ITSN1-211ENST00000399355 UCHL3P15374 230 aa12.88□□□□□ -0.35
ITSN1-211ENST00000399355 NPR1P16066 1061 aa12.88□□□□□ -0.35
ITSN1-211ENST00000399355 INPP5BP32019 993 aa12.88□□□□□ -0.35
ITSN1-211ENST00000399355 NOVP48745 357 aa12.88□□□□□ -0.35
ITSN1-211ENST00000399355 SYDE2Q5VT97 1194 aa12.88□□□□□ -0.35
ITSN1-211ENST00000399355 PPP4R3AQ6IN85 833 aa12.88□□□□□ -0.35
ITSN1-211ENST00000399355 CCNI2Q6ZMN8 369 aaPredicted RBP12.88□□□□□ -0.35
ITSN1-211ENST00000399355 TMOD4Q9NZQ9 345 aa12.88□□□□□ -0.35
ITSN1-211ENST00000399355 BRWD3Q6RI45 1802 aa12.88□□□□□ -0.35
ITSN1-211ENST00000399355 ZEB2O60315 1214 aa12.88□□□□□ -0.35
ITSN1-211ENST00000399355 PON1P27169 355 aa12.88□□□□□ -0.35
ITSN1-211ENST00000399355 MARCKSL1P49006 195 aa12.88□□□□□ -0.35
ITSN1-211ENST00000399355 NPEPPSP55786 919 aa12.88□□□□□ -0.35
ITSN1-211ENST00000399355 U2AF1L4Q8WU68 220 aaKnown RBP12.88□□□□□ -0.35
ITSN1-211ENST00000399355 SLC20A1Q8WUM9 679 aa12.88□□□□□ -0.35
ITSN1-211ENST00000399355 ZNF668Q96K58 619 aaPredicted RBP12.88□□□□□ -0.35
ITSN1-211ENST00000399355 FAM118BQ9BPY3 351 aa12.88□□□□□ -0.35
ITSN1-211ENST00000399355 AMNQ9BXJ7 453 aa12.88□□□□□ -0.35
ITSN1-211ENST00000399355 RAB34Q9BZG1 259 aa12.88□□□□□ -0.35
ITSN1-211ENST00000399355 STK17AQ9UEE5 414 aa12.88□□□□□ -0.35
ITSN1-211ENST00000399355 MYH11P35749 1972 aa12.88□□□□□ -0.35
ITSN1-211ENST00000399355 TACC1O75410 805 aa12.88□□□□□ -0.35
ITSN1-211ENST00000399355 SLITRK3O94933 977 aa12.88□□□□□ -0.35
ITSN1-211ENST00000399355 SPP2Q13103 211 aa12.88□□□□□ -0.35
ITSN1-211ENST00000399355 SPIRE2Q8WWL2 714 aa12.88□□□□□ -0.35
ITSN1-211ENST00000399355 TSG101Q99816 390 aa12.88□□□□□ -0.35
ITSN1-211ENST00000399355 SIPA1L1O43166 1804 aa12.88□□□□□ -0.35
ITSN1-211ENST00000399355 SMIM23A6NLE4 172 aa12.87□□□□□ -0.35
ITSN1-211ENST00000399355 DCDC2CA8MYV0 355 aa12.87□□□□□ -0.35
ITSN1-211ENST00000399355 EIF2AK2P19525 551 aaKnown RBP12.87□□□□□ -0.35
ITSN1-211ENST00000399355 PDCLQ13371 301 aa12.87□□□□□ -0.35
ITSN1-211ENST00000399355 GPATCH4Q5T3I0 446 aaKnown RBP12.87□□□□□ -0.35
ITSN1-211ENST00000399355 SLF2Q8IX21 1173 aa12.87□□□□□ -0.35
ITSN1-211ENST00000399355 ZDHHC15Q96MV8 337 aa12.87□□□□□ -0.35
ITSN1-211ENST00000399355 DPH5Q9H2P9 285 aa12.87□□□□□ -0.35
ITSN1-211ENST00000399355 VAV3Q9UKW4 847 aa12.87□□□□□ -0.35
ITSN1-211ENST00000399355 DNM3Q9UQ16 869 aa12.87□□□□□ -0.35
ITSN1-211ENST00000399355 ESYT2A0FGR8 921 aa12.87□□□□□ -0.35
ITSN1-211ENST00000399355 CEP104O60308 925 aa12.87□□□□□ -0.35
ITSN1-211ENST00000399355 HEXIM1O94992 359 aaKnown RBP12.87□□□□□ -0.35
ITSN1-211ENST00000399355 NR3C1P04150 777 aa12.87□□□□□ -0.35
ITSN1-211ENST00000399355 COL11A2P13942 1736 aaPredicted RBP12.87□□□□□ -0.35
ITSN1-211ENST00000399355 HPDP32754 393 aaPredicted RBP12.87□□□□□ -0.35
ITSN1-211ENST00000399355 MAP9Q49MG5 647 aa12.87□□□□□ -0.35
ITSN1-211ENST00000399355 LRCH2Q5VUJ6 765 aa12.87□□□□□ -0.35
ITSN1-211ENST00000399355 RINT1Q6NUQ1 792 aa12.87□□□□□ -0.35
ITSN1-211ENST00000399355 CCDC65Q8IXS2 484 aa12.87□□□□□ -0.35
ITSN1-211ENST00000399355 RETREG2Q8NC44 543 aa12.87□□□□□ -0.35
ITSN1-211ENST00000399355 PYM1Q9BRP8 204 aaKnown RBP12.87□□□□□ -0.35
ITSN1-211ENST00000399355 ARMCX3Q9UH62 379 aaPredicted RBP12.87□□□□□ -0.35
ITSN1-211ENST00000399355 PDIA5Q14554 519 aa12.87□□□□□ -0.35
ITSN1-211ENST00000399355 HSP90B2PQ58FF3 399 aa12.87□□□□□ -0.35
ITSN1-211ENST00000399355 C15orf52Q6ZUT6 534 aaKnown RBP12.87□□□□□ -0.35
ITSN1-211ENST00000399355 FAM114A1Q8IWE2 563 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms