RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 DYDC2Q96IM9 177 aa26.12■■□□□ 1.77
PABPN1-202ENST00000397276 JRKLQ9Y4A0 524 aa26.12■■□□□ 1.77
PABPN1-202ENST00000397276 ANO9A1A5B4 782 aa26.11■■□□□ 1.77
PABPN1-202ENST00000397276 GCOM1H8Y6P7 765 aaPredicted RBP26.11■■□□□ 1.77
PABPN1-202ENST00000397276 TBCAO75347 108 aaKnown RBP26.11■■□□□ 1.77
PABPN1-202ENST00000397276 POLR2MP0CAP2 368 aa26.11■■□□□ 1.77
PABPN1-202ENST00000397276 SLC9A1P19634 815 aa26.11■■□□□ 1.77
PABPN1-202ENST00000397276 LRRC31Q6UY01 552 aa26.11■■□□□ 1.77
PABPN1-202ENST00000397276 SMARCAL1Q9NZC9 954 aa26.11■■□□□ 1.77
PABPN1-202ENST00000397276 LCA5LO95447 670 aa26.11■■□□□ 1.77
PABPN1-202ENST00000397276 USP14P54578 494 aa26.11■■□□□ 1.77
PABPN1-202ENST00000397276 MRPS25P82663 173 aaKnown RBP26.11■■□□□ 1.77
PABPN1-202ENST00000397276 PDE4CQ08493 712 aa26.11■■□□□ 1.77
PABPN1-202ENST00000397276 EDRF1Q3B7T1 1238 aa26.11■■□□□ 1.77
PABPN1-202ENST00000397276 NFRKBQ6P4R8 1299 aa26.11■■□□□ 1.77
PABPN1-202ENST00000397276 OTOP1Q7RTM1 612 aa26.11■■□□□ 1.77
PABPN1-202ENST00000397276 FAM204AQ9H8W3 233 aa26.11■■□□□ 1.77
PABPN1-202ENST00000397276 PIK3CDO00329 1044 aa26.1■■□□□ 1.77
PABPN1-202ENST00000397276 CYP3A4P08684 503 aa26.1■■□□□ 1.77
PABPN1-202ENST00000397276 MATR3P43243 847 aaKnown RBP eCLIP26.1■■□□□ 1.77
PABPN1-202ENST00000397276 CASP4P49662 377 aa26.1■■□□□ 1.77
PABPN1-202ENST00000397276 DNA2P51530 1060 aa26.1■■□□□ 1.77
PABPN1-202ENST00000397276 KSR1Q8IVT5 923 aa26.1■■□□□ 1.77
PABPN1-202ENST00000397276 TTLL6Q8N841 843 aa26.1■■□□□ 1.77
PABPN1-202ENST00000397276 RIN2Q8WYP3 895 aaPredicted RBP26.1■■□□□ 1.77
PABPN1-202ENST00000397276 STK32BQ9NY57 414 aa26.1■■□□□ 1.77
PABPN1-202ENST00000397276 ARMCX3Q9UH62 379 aaPredicted RBP26.1■■□□□ 1.77
PABPN1-202ENST00000397276 AKAP3O75969 853 aa26.1■■□□□ 1.77
PABPN1-202ENST00000397276 SLITRK3O94933 977 aa26.1■■□□□ 1.77
PABPN1-202ENST00000397276 MARSP56192 900 aaKnown RBP26.1■■□□□ 1.77
PABPN1-202ENST00000397276 EHD2Q9NZN4 543 aa26.1■■□□□ 1.77
PABPN1-202ENST00000397276 PKD2L1Q9P0L9 805 aa26.1■■□□□ 1.77
PABPN1-202ENST00000397276 ADAMTS1Q9UHI8 967 aa26.1■■□□□ 1.77
PABPN1-202ENST00000397276 SNX12Q9UMY4 172 aa26.1■■□□□ 1.77
PABPN1-202ENST00000397276 CNTNAP1P78357 1384 aa26.1■■□□□ 1.77
PABPN1-202ENST00000397276 RINT1Q6NUQ1 792 aa26.09■■□□□ 1.77
PABPN1-202ENST00000397276 EDEM3Q9BZQ6 932 aa26.09■■□□□ 1.77
PABPN1-202ENST00000397276 PCDHB13Q9Y5F0 798 aa26.09■■□□□ 1.77
PABPN1-202ENST00000397276 SLC26A4O43511 780 aa26.09■■□□□ 1.77
PABPN1-202ENST00000397276 EYA4O95677 639 aa26.09■■□□□ 1.77
PABPN1-202ENST00000397276 SERPING1P05155 500 aa26.09■■□□□ 1.77
PABPN1-202ENST00000397276 CKAP4Q07065 602 aaKnown RBP26.09■■□□□ 1.77
PABPN1-202ENST00000397276 HSP90B2PQ58FF3 399 aa26.09■■□□□ 1.77
PABPN1-202ENST00000397276 PPP4R3CPQ6ZMV5 832 aa26.09■■□□□ 1.77
PABPN1-202ENST00000397276 POLR3CQ9BUI4 534 aaPredicted RBP26.09■■□□□ 1.77
PABPN1-202ENST00000397276 FAM184BQ9ULE4 1060 aa26.09■■□□□ 1.77
PABPN1-202ENST00000397276 NMT1P30419 496 aaKnown RBP26.08■■□□□ 1.77
PABPN1-202ENST00000397276 NOP2P46087 812 aaKnown RBP26.08■■□□□ 1.77
PABPN1-202ENST00000397276 ZC2HC1CQ53FD0 456 aaPredicted RBP26.08■■□□□ 1.77
PABPN1-202ENST00000397276 MYCT1Q8N699 235 aa26.08■■□□□ 1.77
PABPN1-202ENST00000397276 TRAF3IP3Q9Y228 551 aa26.08■■□□□ 1.77
PABPN1-202ENST00000397276 ZNF646O15015 1829 aaPredicted RBP26.08■■□□□ 1.77
PABPN1-202ENST00000397276 SSU72P8A0A1W2PR75 194 aa26.08■■□□□ 1.77
PABPN1-202ENST00000397276 VIL1P09327 827 aaKnown RBP26.08■■□□□ 1.77
PABPN1-202ENST00000397276 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.08■■□□□ 1.77
PABPN1-202ENST00000397276 EPM2AIP1Q7L775 607 aaPredicted RBP26.08■■□□□ 1.77
PABPN1-202ENST00000397276 ALS2CR12Q96Q35 445 aa26.08■■□□□ 1.77
PABPN1-202ENST00000397276 HSD17B14Q9BPX1 270 aa26.08■■□□□ 1.77
PABPN1-202ENST00000397276 DDX39AO00148 427 aaKnown RBP26.07■■□□□ 1.76
PABPN1-202ENST00000397276 ARP10275 920 aa26.07■■□□□ 1.76
PABPN1-202ENST00000397276 KLHL30Q0D2K2 578 aa26.07■■□□□ 1.76
PABPN1-202ENST00000397276 CREG2Q8IUH2 290 aa26.07■■□□□ 1.76
PABPN1-202ENST00000397276 GSPT2Q8IYD1 628 aaKnown RBP26.07■■□□□ 1.76
PABPN1-202ENST00000397276 CHURC1Q8WUH1 139 aa26.07■■□□□ 1.76
PABPN1-202ENST00000397276 VCPKMTQ9H867 229 aa26.07■■□□□ 1.76
PABPN1-202ENST00000397276 GAS7O60861 476 aa26.07■■□□□ 1.76
PABPN1-202ENST00000397276 DNAAF5Q86Y56 855 aa26.07■■□□□ 1.76
PABPN1-202ENST00000397276 GMLQ99445 158 aa26.07■■□□□ 1.76
PABPN1-202ENST00000397276 CALUO43852 315 aaPredicted RBP26.07■■□□□ 1.76
PABPN1-202ENST00000397276 PSMD10O75832 226 aa26.07■■□□□ 1.76
PABPN1-202ENST00000397276 NR3C1P04150 777 aa26.07■■□□□ 1.76
PABPN1-202ENST00000397276 SPDYE2Q495Y8 402 aa26.07■■□□□ 1.76
PABPN1-202ENST00000397276 ASTN1O14525 1302 aa26.06■■□□□ 1.76
PABPN1-202ENST00000397276 A0A087X0T9 212 aa26.06■■□□□ 1.76
PABPN1-202ENST00000397276 FAM13AO94988 1023 aa26.06■■□□□ 1.76
PABPN1-202ENST00000397276 IVLP07476 585 aa26.06■■□□□ 1.76
PABPN1-202ENST00000397276 FAM228BP0C875 321 aa26.06■■□□□ 1.76
PABPN1-202ENST00000397276 XRCC5P13010 732 aaKnown RBP26.06■■□□□ 1.76
PABPN1-202ENST00000397276 ZC3H3Q8IXZ2 948 aaKnown RBP26.06■■□□□ 1.76
PABPN1-202ENST00000397276 FAM71BQ8TC56 605 aa26.06■■□□□ 1.76
PABPN1-202ENST00000397276 OSBPL9Q96SU4 736 aa26.06■■□□□ 1.76
PABPN1-202ENST00000397276 PACSIN1Q9BY11 444 aa26.06■■□□□ 1.76
PABPN1-202ENST00000397276 RANBP17Q9H2T7 1088 aaKnown RBP26.06■■□□□ 1.76
PABPN1-202ENST00000397276 WRAP73Q9P2S5 460 aaPredicted RBP26.06■■□□□ 1.76
PABPN1-202ENST00000397276 SRCAPQ6ZRS2 3230 aa26.06■■□□□ 1.76
PABPN1-202ENST00000397276 RNF40O75150 1001 aa26.06■■□□□ 1.76
PABPN1-202ENST00000397276 SYF2O95926 243 aaKnown RBP26.06■■□□□ 1.76
PABPN1-202ENST00000397276 WDR93Q6P2C0 686 aa26.06■■□□□ 1.76
PABPN1-202ENST00000397276 LDHDQ86WU2 507 aa26.06■■□□□ 1.76
PABPN1-202ENST00000397276 AGBL1Q96MI9 1066 aa26.06■■□□□ 1.76
PABPN1-202ENST00000397276 ZNF577Q9BSK1 485 aa26.06■■□□□ 1.76
PABPN1-202ENST00000397276 GBP3Q9H0R5 595 aa26.06■■□□□ 1.76
PABPN1-202ENST00000397276 GANQ9H2C0 597 aa26.06■■□□□ 1.76
PABPN1-202ENST00000397276 PDXKO00764 312 aa26.05■■□□□ 1.76
PABPN1-202ENST00000397276 AFPP02771 609 aaKnown RBP26.05■■□□□ 1.76
PABPN1-202ENST00000397276 NBPF9Q3BBW0 867 aa26.05■■□□□ 1.76
PABPN1-202ENST00000397276 CEP55Q53EZ4 464 aa26.05■■□□□ 1.76
PABPN1-202ENST00000397276 PACS2Q86VP3 889 aa26.05■■□□□ 1.76
PABPN1-202ENST00000397276 NUCKS1Q9H1E3 243 aaKnown RBP26.05■■□□□ 1.76
PABPN1-202ENST00000397276 ASIC2Q16515 512 aa26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms