RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 TCF3P15923 654 aa13.34□□□□□ -0.27
CHD3-203ENST00000380358 SCINQ9Y6U3 715 aa13.34□□□□□ -0.27
CHD3-203ENST00000380358 NCAPD3P42695 1498 aa13.33□□□□□ -0.27
CHD3-203ENST00000380358 IQANK1A0A1B0GTG1 560 aa13.33□□□□□ -0.27
CHD3-203ENST00000380358 ZBTB7AO95365 584 aa13.33□□□□□ -0.27
CHD3-203ENST00000380358 SCG2P13521 617 aa13.33□□□□□ -0.27
CHD3-203ENST00000380358 ADCK5Q3MIX3 580 aa13.33□□□□□ -0.27
CHD3-203ENST00000380358 ALFQ53S48 1182 aa13.33□□□□□ -0.27
CHD3-203ENST00000380358 SPDYAQ5MJ70 313 aa13.33□□□□□ -0.27
CHD3-203ENST00000380358 RGS9BPQ6ZS82 235 aa13.33□□□□□ -0.27
CHD3-203ENST00000380358 KBTBD3Q8NAB2 608 aa13.33□□□□□ -0.27
CHD3-203ENST00000380358 PIGOQ8TEQ8 1089 aa13.33□□□□□ -0.27
CHD3-203ENST00000380358 PDE11AQ9HCR9 933 aa13.33□□□□□ -0.27
CHD3-203ENST00000380358 SELENONQ9NZV5 590 aa13.33□□□□□ -0.27
CHD3-203ENST00000380358 GTF2A1LQ9UNN4 478 aa13.33□□□□□ -0.27
CHD3-203ENST00000380358 E2F8A0AVK6 867 aa13.33□□□□□ -0.28
CHD3-203ENST00000380358 FAM47DPA6NHR8 397 aa13.33□□□□□ -0.28
CHD3-203ENST00000380358 H0Y3Z8 333 aa13.33□□□□□ -0.28
CHD3-203ENST00000380358 RXRBP28702 533 aa13.33□□□□□ -0.28
CHD3-203ENST00000380358 PHF21AQ96BD5 680 aa13.33□□□□□ -0.28
CHD3-203ENST00000380358 RMDN1Q96DB5 314 aa13.33□□□□□ -0.28
CHD3-203ENST00000380358 NRBF2Q96F24 287 aa13.33□□□□□ -0.28
CHD3-203ENST00000380358 KLC2Q9H0B6 622 aa13.33□□□□□ -0.28
CHD3-203ENST00000380358 SP110Q9HB58 689 aa13.33□□□□□ -0.28
CHD3-203ENST00000380358 ADA2Q9NZK5 511 aa13.33□□□□□ -0.28
CHD3-203ENST00000380358 GOLGA8QA0A0J9YX86 632 aa13.33□□□□□ -0.28
CHD3-203ENST00000380358 EXOC1LA0A1B0GW35 172 aa13.33□□□□□ -0.28
CHD3-203ENST00000380358 GOLGA8OA6NCC3 632 aa13.33□□□□□ -0.28
CHD3-203ENST00000380358 GOLGA8KD6RF30 607 aa13.33□□□□□ -0.28
CHD3-203ENST00000380358 GOLGA8NF8WBI6 632 aa13.33□□□□□ -0.28
CHD3-203ENST00000380358 H0YCG3 227 aa13.33□□□□□ -0.28
CHD3-203ENST00000380358 VAMP4O75379 141 aa13.33□□□□□ -0.28
CHD3-203ENST00000380358 MDH1BQ5I0G3 518 aa13.33□□□□□ -0.28
CHD3-203ENST00000380358 DMAP1Q9NPF5 467 aaPredicted RBP13.33□□□□□ -0.28
CHD3-203ENST00000380358 SPAG7O75391 227 aa13.33□□□□□ -0.28
CHD3-203ENST00000380358 TMCC1O94876 653 aa13.33□□□□□ -0.28
CHD3-203ENST00000380358 PYROXD1Q8WU10 500 aa13.33□□□□□ -0.28
CHD3-203ENST00000380358 RUBCNLQ9H714 662 aa13.33□□□□□ -0.28
CHD3-203ENST00000380358 COPB2P35606 906 aa13.33□□□□□ -0.28
CHD3-203ENST00000380358 CSE1LP55060 971 aaKnown RBP13.33□□□□□ -0.28
CHD3-203ENST00000380358 DMC1Q14565 340 aa13.33□□□□□ -0.28
CHD3-203ENST00000380358 PATL1Q86TB9 770 aaKnown RBP13.33□□□□□ -0.28
CHD3-203ENST00000380358 TMEM106CQ9BVX2 250 aa13.33□□□□□ -0.28
CHD3-203ENST00000380358 EXOC8Q8IYI6 725 aa13.33□□□□□ -0.28
CHD3-203ENST00000380358 DYNLL2Q96FJ2 89 aa13.33□□□□□ -0.28
CHD3-203ENST00000380358 KLF15Q9UIH9 416 aa13.33□□□□□ -0.28
CHD3-203ENST00000380358 MKL2Q9ULH7 1088 aa13.33□□□□□ -0.28
CHD3-203ENST00000380358 ARHGAP10A1A4S6 786 aa13.32□□□□□ -0.28
CHD3-203ENST00000380358 ADORA1P30542 326 aa13.32□□□□□ -0.28
CHD3-203ENST00000380358 CARSP49589 748 aaKnown RBP13.32□□□□□ -0.28
CHD3-203ENST00000380358 RHPN2Q8IUC4 686 aa13.32□□□□□ -0.28
CHD3-203ENST00000380358 SLC13A1Q9BZW2 595 aa13.32□□□□□ -0.28
CHD3-203ENST00000380358 BABAM1Q9NWV8 329 aa13.32□□□□□ -0.28
CHD3-203ENST00000380358 LZTS1Q9Y250 596 aa13.32□□□□□ -0.28
CHD3-203ENST00000380358 MRFAP1Q9Y605 127 aa13.32□□□□□ -0.28
CHD3-203ENST00000380358 DCTN3O75935 186 aa13.32□□□□□ -0.28
CHD3-203ENST00000380358 PAMP19021 973 aa13.32□□□□□ -0.28
CHD3-203ENST00000380358 ME3Q16798 604 aa13.32□□□□□ -0.28
CHD3-203ENST00000380358 PKN3Q6P5Z2 889 aa13.32□□□□□ -0.28
CHD3-203ENST00000380358 PIGSQ96S52 555 aa13.32□□□□□ -0.28
CHD3-203ENST00000380358 DCTPP1Q9H773 170 aa13.32□□□□□ -0.28
CHD3-203ENST00000380358 PCSK1NQ9UHG2 260 aa13.32□□□□□ -0.28
CHD3-203ENST00000380358 LCP1P13796 627 aa13.32□□□□□ -0.28
CHD3-203ENST00000380358 USP19O94966 1318 aa13.32□□□□□ -0.28
CHD3-203ENST00000380358 EIF3CLB5ME19 914 aaKnown RBP13.32□□□□□ -0.28
CHD3-203ENST00000380358 EFCAB14O75071 495 aa13.32□□□□□ -0.28
CHD3-203ENST00000380358 SLC16A1P53985 500 aa13.32□□□□□ -0.28
CHD3-203ENST00000380358 AOC3Q16853 763 aa13.32□□□□□ -0.28
CHD3-203ENST00000380358 FBXO41Q8TF61 875 aa13.32□□□□□ -0.28
CHD3-203ENST00000380358 MRFAP1L1Q96HT8 127 aa13.32□□□□□ -0.28
CHD3-203ENST00000380358 SMARCA4P51532 1647 aa13.32□□□□□ -0.28
CHD3-203ENST00000380358 TAC1P20366 129 aa13.32□□□□□ -0.28
CHD3-203ENST00000380358 IP6K1Q92551 441 aa13.32□□□□□ -0.28
CHD3-203ENST00000380358 ESRRAP11474 423 aaPredicted RBP13.32□□□□□ -0.28
CHD3-203ENST00000380358 NDUFA8P51970 172 aa13.32□□□□□ -0.28
CHD3-203ENST00000380358 IL31Q6EBC2 164 aa13.32□□□□□ -0.28
CHD3-203ENST00000380358 FAM196AQ6ZSG2 479 aa13.32□□□□□ -0.28
CHD3-203ENST00000380358 VN1R5Q7Z5H4 357 aa13.32□□□□□ -0.28
CHD3-203ENST00000380358 TEX9Q8N6V9 391 aa13.32□□□□□ -0.28
CHD3-203ENST00000380358 AIPL1Q9NZN9 384 aa13.32□□□□□ -0.28
CHD3-203ENST00000380358 PACSIN2Q9UNF0 486 aaPredicted RBP13.32□□□□□ -0.28
CHD3-203ENST00000380358 HECW1Q76N89 1606 aa13.31□□□□□ -0.28
CHD3-203ENST00000380358 CYP2D7A0A087X1C5 515 aa13.31□□□□□ -0.28
CHD3-203ENST00000380358 ECEL1O95672 775 aa13.31□□□□□ -0.28
CHD3-203ENST00000380358 TRIM32Q13049 653 aa13.31□□□□□ -0.28
CHD3-203ENST00000380358 DALRD3Q5D0E6 543 aaKnown RBP13.31□□□□□ -0.28
CHD3-203ENST00000380358 TADA2BQ86TJ2 420 aa13.31□□□□□ -0.28
CHD3-203ENST00000380358 RASSF3Q86WH2 238 aa13.31□□□□□ -0.28
CHD3-203ENST00000380358 ERICH1Q86X53 443 aa13.31□□□□□ -0.28
CHD3-203ENST00000380358 NOSTRINQ8IVI9 506 aa13.31□□□□□ -0.28
CHD3-203ENST00000380358 RAET1EQ8TD07 263 aa13.31□□□□□ -0.28
CHD3-203ENST00000380358 ANKRD49Q8WVL7 239 aa13.31□□□□□ -0.28
CHD3-203ENST00000380358 ASZ1Q8WWH4 475 aa13.31□□□□□ -0.28
CHD3-203ENST00000380358 CYP4F11Q9HBI6 524 aa13.31□□□□□ -0.28
CHD3-203ENST00000380358 STX18Q9P2W9 335 aaKnown RBP13.31□□□□□ -0.28
CHD3-203ENST00000380358 PPP2R2CQ9Y2T4 447 aa13.31□□□□□ -0.28
CHD3-203ENST00000380358 NPATQ14207 1427 aa13.31□□□□□ -0.28
CHD3-203ENST00000380358 ZNF804BA4D1E1 1349 aa13.31□□□□□ -0.28
CHD3-203ENST00000380358 SKAP2O75563 359 aaPredicted RBP13.31□□□□□ -0.28
CHD3-203ENST00000380358 TSPY1Q01534 308 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms