RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 IKQ13123 557 aaPredicted RBP22.29■■□□□ 1.16
CLN5-201ENST00000377453 SEPT2Q15019 361 aa22.29■■□□□ 1.16
CLN5-201ENST00000377453 TTC31Q49AM3 519 aaPredicted RBP22.29■■□□□ 1.16
CLN5-201ENST00000377453 SLFN13Q68D06 897 aa22.29■■□□□ 1.16
CLN5-201ENST00000377453 APOBEC3HQ6NTF7 200 aaKnown RBP22.29■■□□□ 1.16
CLN5-201ENST00000377453 ETNPPLQ8TBG4 499 aa22.29■■□□□ 1.16
CLN5-201ENST00000377453 FAM107BQ9H098 131 aa22.29■■□□□ 1.16
CLN5-201ENST00000377453 TSKSQ9UJT2 592 aa22.29■■□□□ 1.16
CLN5-201ENST00000377453 KIF4AO95239 1232 aa22.29■■□□□ 1.16
CLN5-201ENST00000377453 GNA14O95837 355 aa22.29■■□□□ 1.16
CLN5-201ENST00000377453 TNFRSF8P28908 595 aa22.29■■□□□ 1.16
CLN5-201ENST00000377453 HPDP32754 393 aaPredicted RBP22.29■■□□□ 1.16
CLN5-201ENST00000377453 SEC24CP53992 1094 aa22.29■■□□□ 1.16
CLN5-201ENST00000377453 MARSP56192 900 aaKnown RBP22.29■■□□□ 1.16
CLN5-201ENST00000377453 EXOC3L4Q17RC7 722 aa22.29■■□□□ 1.16
CLN5-201ENST00000377453 TAF4BQ92750 862 aa22.29■■□□□ 1.16
CLN5-201ENST00000377453 NUCKS1Q9H1E3 243 aaKnown RBP22.29■■□□□ 1.16
CLN5-201ENST00000377453 LRRC4CQ9HCJ2 640 aa22.29■■□□□ 1.16
CLN5-201ENST00000377453 NAGPAQ9UK23 515 aa22.29■■□□□ 1.16
CLN5-201ENST00000377453 PLAAQ9Y263 795 aa22.29■■□□□ 1.16
CLN5-201ENST00000377453 PPEF1O14829 653 aaPredicted RBP22.28■■□□□ 1.16
CLN5-201ENST00000377453 BBOX1O75936 387 aa22.28■■□□□ 1.16
CLN5-201ENST00000377453 GCNT3O95395 438 aa22.28■■□□□ 1.16
CLN5-201ENST00000377453 KNOP1Q1ED39 458 aaKnown RBP22.28■■□□□ 1.16
CLN5-201ENST00000377453 NAA35Q5VZE5 725 aa22.28■■□□□ 1.16
CLN5-201ENST00000377453 ALKBH5Q6P6C2 394 aaKnown RBP22.28■■□□□ 1.16
CLN5-201ENST00000377453 SPATA31A6Q5VVP1 1343 aa22.28■■□□□ 1.16
CLN5-201ENST00000377453 FRMD3A2A2Y4 597 aa22.28■■□□□ 1.16
CLN5-201ENST00000377453 EML1O00423 815 aa22.28■■□□□ 1.16
CLN5-201ENST00000377453 EBAG9O00559 213 aa22.28■■□□□ 1.16
CLN5-201ENST00000377453 AFPP02771 609 aaKnown RBP22.28■■□□□ 1.16
CLN5-201ENST00000377453 COG2Q14746 738 aa22.28■■□□□ 1.16
CLN5-201ENST00000377453 GLE1Q53GS7 698 aaKnown RBP22.28■■□□□ 1.16
CLN5-201ENST00000377453 CEP85LQ5SZL2 805 aa22.28■■□□□ 1.16
CLN5-201ENST00000377453 KIAA0825Q8IV33 1275 aa22.28■■□□□ 1.16
CLN5-201ENST00000377453 METTL13Q8N6R0 699 aa22.28■■□□□ 1.16
CLN5-201ENST00000377453 LENG9Q96B70 501 aa22.28■■□□□ 1.16
CLN5-201ENST00000377453 DBNDD1Q9H9R9 158 aa22.28■■□□□ 1.16
CLN5-201ENST00000377453 ASTN1O14525 1302 aa22.28■■□□□ 1.16
CLN5-201ENST00000377453 GFPT2O94808 682 aa22.27■■□□□ 1.16
CLN5-201ENST00000377453 EPB41P11171 864 aaKnown RBP22.27■■□□□ 1.16
CLN5-201ENST00000377453 ZC2HC1CQ53FD0 456 aaPredicted RBP22.27■■□□□ 1.16
CLN5-201ENST00000377453 ADAT2Q7Z6V5 191 aaKnown RBP22.27■■□□□ 1.16
CLN5-201ENST00000377453 KAT2BQ92831 832 aa22.27■■□□□ 1.16
CLN5-201ENST00000377453 LUC7LQ9NQ29 371 aaKnown RBP22.27■■□□□ 1.16
CLN5-201ENST00000377453 NDUFAB1O14561 156 aa22.27■■□□□ 1.16
CLN5-201ENST00000377453 CHMP2AO43633 222 aa22.27■■□□□ 1.16
CLN5-201ENST00000377453 ECHS1P30084 290 aa22.27■■□□□ 1.16
CLN5-201ENST00000377453 COPB2P35606 906 aa22.27■■□□□ 1.16
CLN5-201ENST00000377453 UBXN2AP68543 259 aa22.27■■□□□ 1.16
CLN5-201ENST00000377453 SIAH1Q8IUQ4 282 aa22.27■■□□□ 1.16
CLN5-201ENST00000377453 SPICE1Q8N0Z3 855 aa22.27■■□□□ 1.16
CLN5-201ENST00000377453 U2AF1L4Q8WU68 220 aaKnown RBP22.27■■□□□ 1.16
CLN5-201ENST00000377453 CELF4Q9BZC1 486 aaKnown RBP22.27■■□□□ 1.16
CLN5-201ENST00000377453 SIX2Q9NPC8 291 aa22.27■■□□□ 1.16
CLN5-201ENST00000377453 XRCC5P13010 732 aaKnown RBP22.27■■□□□ 1.15
CLN5-201ENST00000377453 NMT1P30419 496 aaKnown RBP22.27■■□□□ 1.15
CLN5-201ENST00000377453 JAG1P78504 1218 aa22.27■■□□□ 1.15
CLN5-201ENST00000377453 CTTNQ14247 550 aaKnown RBP22.27■■□□□ 1.15
CLN5-201ENST00000377453 ZC3H12CQ9C0D7 883 aaKnown RBP22.27■■□□□ 1.15
CLN5-201ENST00000377453 GCNT4Q9P109 453 aa22.27■■□□□ 1.15
CLN5-201ENST00000377453 TULP1O00294 542 aaPredicted RBP22.26■■□□□ 1.15
CLN5-201ENST00000377453 BACH1O14867 736 aa22.26■■□□□ 1.15
CLN5-201ENST00000377453 NR3C1P04150 777 aa22.26■■□□□ 1.15
CLN5-201ENST00000377453 HLA-DOAP06340 250 aa22.26■■□□□ 1.15
CLN5-201ENST00000377453 EPHA7Q15375 998 aa22.26■■□□□ 1.15
CLN5-201ENST00000377453 SAMD1Q6SPF0 538 aaPredicted RBP22.26■■□□□ 1.15
CLN5-201ENST00000377453 TADA2BQ86TJ2 420 aa22.26■■□□□ 1.15
CLN5-201ENST00000377453 ZC3H3Q8IXZ2 948 aaKnown RBP22.26■■□□□ 1.15
CLN5-201ENST00000377453 LRRC57Q8N9N7 239 aa22.26■■□□□ 1.15
CLN5-201ENST00000377453 RUBCNQ92622 972 aa22.26■■□□□ 1.15
CLN5-201ENST00000377453 OSGEPQ9NPF4 335 aa22.26■■□□□ 1.15
CLN5-201ENST00000377453 DNM3Q9UQ16 869 aa22.26■■□□□ 1.15
CLN5-201ENST00000377453 NOC2LQ9Y3T9 749 aaKnown RBP22.26■■□□□ 1.15
CLN5-201ENST00000377453 SHTN1A0MZ66 631 aa22.26■■□□□ 1.15
CLN5-201ENST00000377453 RBM5P52756 815 aaKnown RBP eCLIP22.26■■□□□ 1.15
CLN5-201ENST00000377453 EDRF1Q3B7T1 1238 aa22.26■■□□□ 1.15
CLN5-201ENST00000377453 TRIM31Q9BZY9 425 aa22.26■■□□□ 1.15
CLN5-201ENST00000377453 SWAP70Q9UH65 585 aa22.26■■□□□ 1.15
CLN5-201ENST00000377453 AMACRQ9UHK6 382 aa22.26■■□□□ 1.15
CLN5-201ENST00000377453 NR2E1Q9Y466 385 aa22.26■■□□□ 1.15
CLN5-201ENST00000377453 DDX3XO00571 662 aaKnown RBP eCLIP22.25■■□□□ 1.151e-8■■■□□ 16.6
CLN5-201ENST00000377453 SKOR1P84550 965 aa22.25■■□□□ 1.15
CLN5-201ENST00000377453 UAP1Q16222 522 aaPredicted RBP22.25■■□□□ 1.15
CLN5-201ENST00000377453 TPCN2Q8NHX9 752 aa22.25■■□□□ 1.15
CLN5-201ENST00000377453 QTRT2Q9H974 415 aaKnown RBP22.25■■□□□ 1.15
CLN5-201ENST00000377453 MSH4O15457 936 aa22.25■■□□□ 1.15
CLN5-201ENST00000377453 NR1D1P20393 614 aa22.25■■□□□ 1.15
CLN5-201ENST00000377453 USP11P51784 963 aa22.25■■□□□ 1.15
CLN5-201ENST00000377453 FBXW10Q5XX13 1052 aa22.25■■□□□ 1.15
CLN5-201ENST00000377453 SH3BP5LQ7L8J4 393 aa22.25■■□□□ 1.15
CLN5-201ENST00000377453 SLC35C1Q96A29 364 aa22.25■■□□□ 1.15
CLN5-201ENST00000377453 TMEM59LQ9UK28 342 aa22.25■■□□□ 1.15
CLN5-201ENST00000377453 ABCB4P21439 1286 aa22.24■■□□□ 1.15
CLN5-201ENST00000377453 TNNC1P63316 161 aa22.24■■□□□ 1.15
CLN5-201ENST00000377453 FOXR2Q6PJQ5 311 aa22.24■■□□□ 1.15
CLN5-201ENST00000377453 GBP6Q6ZN66 633 aa22.24■■□□□ 1.15
CLN5-201ENST00000377453 EPM2AIP1Q7L775 607 aaPredicted RBP22.24■■□□□ 1.15
CLN5-201ENST00000377453 SYT2Q8N9I0 419 aaPredicted RBP22.24■■□□□ 1.15
CLN5-201ENST00000377453 PPM1EQ8WY54 764 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms