RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 ZNF232Q9UNY5 417 aa9.54□□□□□ -0.88
SMARCA1-203ENST00000371123 LRRC42Q9Y546 428 aa9.54□□□□□ -0.88
SMARCA1-203ENST00000371123 PCDHGA4Q9Y5G9 962 aa9.54□□□□□ -0.88
SMARCA1-203ENST00000371123 SCN11AQ9UI33 1791 aa9.54□□□□□ -0.88
SMARCA1-203ENST00000371123 GRID2IPA4D2P6 1211 aa9.54□□□□□ -0.88
SMARCA1-203ENST00000371123 USP17L3A6NCW0 530 aa9.54□□□□□ -0.88
SMARCA1-203ENST00000371123 USP17L4A6NCW7 530 aa9.54□□□□□ -0.88
SMARCA1-203ENST00000371123 FCER1AP12319 257 aa9.54□□□□□ -0.88
SMARCA1-203ENST00000371123 POU5F1Q01860 360 aaKnown RBP9.54□□□□□ -0.88
SMARCA1-203ENST00000371123 ROR2Q01974 943 aaKnown RBP9.54□□□□□ -0.88
SMARCA1-203ENST00000371123 NKX1-1Q15270 411 aaPredicted RBP9.54□□□□□ -0.88
SMARCA1-203ENST00000371123 GKAP1Q5VSY0 366 aaPredicted RBP9.54□□□□□ -0.88
SMARCA1-203ENST00000371123 KANK3Q6NY19 840 aa9.54□□□□□ -0.88
SMARCA1-203ENST00000371123 USP17L1Q7RTZ2 530 aa9.54□□□□□ -0.88
SMARCA1-203ENST00000371123 TRPM8Q7Z2W7 1104 aa9.54□□□□□ -0.88
SMARCA1-203ENST00000371123 SPATA21Q7Z572 469 aa9.54□□□□□ -0.88
SMARCA1-203ENST00000371123 USP38Q8NB14 1042 aa9.54□□□□□ -0.88
SMARCA1-203ENST00000371123 SCFD2Q8WU76 684 aa9.54□□□□□ -0.88
SMARCA1-203ENST00000371123 NAF1Q96HR8 494 aaKnown RBP9.54□□□□□ -0.88
SMARCA1-203ENST00000371123 RBM41Q96IZ5 413 aaKnown RBP9.54□□□□□ -0.88
SMARCA1-203ENST00000371123 NOC4LQ9BVI4 516 aaKnown RBP9.54□□□□□ -0.88
SMARCA1-203ENST00000371123 NOP53Q9NZM5 478 aaKnown RBP9.54□□□□□ -0.88
SMARCA1-203ENST00000371123 DAPK3O43293 454 aa9.53□□□□□ -0.88
SMARCA1-203ENST00000371123 NOL4O94818 638 aa9.53□□□□□ -0.88
SMARCA1-203ENST00000371123 PDHA1P08559 390 aa9.53□□□□□ -0.88
SMARCA1-203ENST00000371123 BNIP1Q12981 228 aa9.53□□□□□ -0.88
SMARCA1-203ENST00000371123 TAB3Q8N5C8 712 aaPredicted RBP9.53□□□□□ -0.88
SMARCA1-203ENST00000371123 PRMT1Q99873 361 aaKnown RBP9.53□□□□□ -0.88
SMARCA1-203ENST00000371123 GORASP1Q9BQQ3 440 aa9.53□□□□□ -0.88
SMARCA1-203ENST00000371123 ECT2Q9H8V3 914 aa9.53□□□□□ -0.88
SMARCA1-203ENST00000371123 SEC63Q9UGP8 760 aaKnown RBP9.53□□□□□ -0.88
SMARCA1-203ENST00000371123 TCEAL9Q9UHQ7 104 aa9.53□□□□□ -0.88
SMARCA1-203ENST00000371123 RTCBQ9Y3I0 505 aaKnown RBP9.53□□□□□ -0.88
SMARCA1-203ENST00000371123 GCOM1H8Y6P7 765 aaPredicted RBP9.53□□□□□ -0.88
SMARCA1-203ENST00000371123 PEX11AO75192 247 aa9.53□□□□□ -0.88
SMARCA1-203ENST00000371123 USP17L8P0C7I0 530 aa9.53□□□□□ -0.88
SMARCA1-203ENST00000371123 MYZAPP0CAP1 466 aa9.53□□□□□ -0.88
SMARCA1-203ENST00000371123 TCP1P17987 556 aaKnown RBP9.53□□□□□ -0.88
SMARCA1-203ENST00000371123 RFC5P40937 340 aa9.53□□□□□ -0.88
SMARCA1-203ENST00000371123 KCNMA1Q12791 1236 aa9.53□□□□□ -0.88
SMARCA1-203ENST00000371123 DTHD1Q6ZMT9 781 aa9.53□□□□□ -0.88
SMARCA1-203ENST00000371123 RRAGAQ7L523 313 aa9.53□□□□□ -0.88
SMARCA1-203ENST00000371123 MFN1Q8IWA4 741 aa9.53□□□□□ -0.88
SMARCA1-203ENST00000371123 GLIS3Q8NEA6 775 aa9.53□□□□□ -0.88
SMARCA1-203ENST00000371123 LBHD1Q9BQE6 289 aaPredicted RBP9.53□□□□□ -0.88
SMARCA1-203ENST00000371123 NUCKS1Q9H1E3 243 aaKnown RBP9.53□□□□□ -0.88
SMARCA1-203ENST00000371123 FAM196BA6NMK8 535 aa9.53□□□□□ -0.88
SMARCA1-203ENST00000371123 TRAF5O00463 557 aa9.53□□□□□ -0.88
SMARCA1-203ENST00000371123 SP100P23497 879 aaPredicted RBP9.53□□□□□ -0.88
SMARCA1-203ENST00000371123 CTNNA1P35221 906 aaKnown RBP9.53□□□□□ -0.88
SMARCA1-203ENST00000371123 PAFAH1B1P43034 410 aa9.53□□□□□ -0.88
SMARCA1-203ENST00000371123 RANBP1P43487 201 aa9.53□□□□□ -0.88
SMARCA1-203ENST00000371123 STK4Q13043 487 aa9.53□□□□□ -0.88
SMARCA1-203ENST00000371123 TRIM68Q6AZZ1 485 aa9.53□□□□□ -0.88
SMARCA1-203ENST00000371123 NRG4Q8WWG1 115 aa9.53□□□□□ -0.88
SMARCA1-203ENST00000371123 PBKQ96KB5 322 aa9.53□□□□□ -0.88
SMARCA1-203ENST00000371123 KRT23Q9C075 422 aa9.53□□□□□ -0.88
SMARCA1-203ENST00000371123 SEMA6BQ9H3T3 888 aa9.53□□□□□ -0.88
SMARCA1-203ENST00000371123 RGPD3A6NKT7 1758 aaPredicted RBP9.52□□□□□ -0.88
SMARCA1-203ENST00000371123 RGPD4Q7Z3J3 1758 aa9.52□□□□□ -0.88
SMARCA1-203ENST00000371123 CTNND1O60716 968 aaKnown RBP9.52□□□□□ -0.88
SMARCA1-203ENST00000371123 COPB2P35606 906 aa9.52□□□□□ -0.88
SMARCA1-203ENST00000371123 MMP13P45452 471 aa9.52□□□□□ -0.88
SMARCA1-203ENST00000371123 ATP2C1P98194 919 aaPredicted RBP9.52□□□□□ -0.88
SMARCA1-203ENST00000371123 PHLDB2Q86SQ0 1253 aa9.52□□□□□ -0.88
SMARCA1-203ENST00000371123 LRRC47Q8N1G4 583 aaKnown RBP9.52□□□□□ -0.88
SMARCA1-203ENST00000371123 WHAMMQ8TF30 809 aa9.52□□□□□ -0.88
SMARCA1-203ENST00000371123 TEKT4Q8WW24 435 aa9.52□□□□□ -0.88
SMARCA1-203ENST00000371123 FAM210AQ96ND0 272 aa9.52□□□□□ -0.88
SMARCA1-203ENST00000371123 DDX47Q9H0S4 455 aaKnown RBP9.52□□□□□ -0.88
SMARCA1-203ENST00000371123 RNF41Q9H4P4 317 aaPredicted RBP9.52□□□□□ -0.88
SMARCA1-203ENST00000371123 TMEM165Q9HC07 324 aa9.52□□□□□ -0.88
SMARCA1-203ENST00000371123 SERPINA10Q9UK55 444 aa9.52□□□□□ -0.88
SMARCA1-203ENST00000371123 RIC1Q4ADV7 1423 aa9.52□□□□□ -0.89
SMARCA1-203ENST00000371123 H7C1D1 291 aa9.52□□□□□ -0.89
SMARCA1-203ENST00000371123 GSTA1P08263 222 aa9.52□□□□□ -0.89
SMARCA1-203ENST00000371123 CALM1P0DP23 149 aa9.52□□□□□ -0.89
SMARCA1-203ENST00000371123 CALM2P0DP24 149 aa9.52□□□□□ -0.89
SMARCA1-203ENST00000371123 CALM3P0DP25 149 aa9.52□□□□□ -0.89
SMARCA1-203ENST00000371123 CYLC1P35663 651 aaPredicted RBP9.52□□□□□ -0.89
SMARCA1-203ENST00000371123 MPP2Q14168 576 aa9.52□□□□□ -0.89
SMARCA1-203ENST00000371123 CPLX4Q7Z7G2 160 aa9.52□□□□□ -0.89
SMARCA1-203ENST00000371123 SCAF8Q9UPN6 1271 aaKnown RBP9.52□□□□□ -0.89
SMARCA1-203ENST00000371123 CCDC88AQ3V6T2 1871 aa9.52□□□□□ -0.89
SMARCA1-203ENST00000371123 ASAP2O43150 1006 aa9.52□□□□□ -0.89
SMARCA1-203ENST00000371123 GTPBP6O43824 516 aaPredicted RBP9.52□□□□□ -0.89
SMARCA1-203ENST00000371123 SLC16A2P36021 539 aa9.52□□□□□ -0.89
SMARCA1-203ENST00000371123 UBXN2AP68543 259 aa9.52□□□□□ -0.89
SMARCA1-203ENST00000371123 EHHADHQ08426 723 aa9.52□□□□□ -0.89
SMARCA1-203ENST00000371123 AGBL2Q5U5Z8 902 aa9.52□□□□□ -0.89
SMARCA1-203ENST00000371123 CCDC197Q8NCU1 140 aa9.52□□□□□ -0.89
SMARCA1-203ENST00000371123 AZIN2Q96A70 460 aa9.52□□□□□ -0.89
SMARCA1-203ENST00000371123 ALS2CR12Q96Q35 445 aa9.52□□□□□ -0.89
SMARCA1-203ENST00000371123 PAIP2Q9BPZ3 127 aaKnown RBP9.52□□□□□ -0.89
SMARCA1-203ENST00000371123 TMX4Q9H1E5 349 aaPredicted RBP9.52□□□□□ -0.89
SMARCA1-203ENST00000371123 THAP9Q9H5L6 903 aa9.52□□□□□ -0.89
SMARCA1-203ENST00000371123 STK38LQ9Y2H1 464 aa9.52□□□□□ -0.89
SMARCA1-203ENST00000371123 CD2APQ9Y5K6 639 aa9.52□□□□□ -0.89
SMARCA1-203ENST00000371123 ATRNO75882 1429 aa9.52□□□□□ -0.89
SMARCA1-203ENST00000371123 SPATA31A6Q5VVP1 1343 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms