RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 EEPD1Q7L9B9 569 aa9.2□□□□□ -0.94
PTPRK-206ENST00000368215 SH3RF1Q7Z6J0 888 aa9.2□□□□□ -0.94
PTPRK-206ENST00000368215 FAM160B2Q86V87 743 aa9.2□□□□□ -0.94
PTPRK-206ENST00000368215 LACRTQ9GZZ8 138 aa9.2□□□□□ -0.94
PTPRK-206ENST00000368215 KMT5AQ9NQR1 393 aa9.2□□□□□ -0.94
PTPRK-206ENST00000368215 C1orf112Q9NSG2 853 aa9.2□□□□□ -0.94
PTPRK-206ENST00000368215 TYW1Q9NV66 732 aaKnown RBP9.2□□□□□ -0.94
PTPRK-206ENST00000368215 NYAP2Q9P242 653 aa9.2□□□□□ -0.94
PTPRK-206ENST00000368215 N4BP1O75113 896 aaKnown RBP9.2□□□□□ -0.94
PTPRK-206ENST00000368215 SLC9A1P19634 815 aa9.2□□□□□ -0.94
PTPRK-206ENST00000368215 CCT5P48643 541 aa9.2□□□□□ -0.94
PTPRK-206ENST00000368215 POLGP54098 1239 aaPredicted RBP9.2□□□□□ -0.94
PTPRK-206ENST00000368215 LXNQ9BS40 222 aa9.2□□□□□ -0.94
PTPRK-206ENST00000368215 RAB17Q9H0T7 212 aa9.2□□□□□ -0.94
PTPRK-206ENST00000368215 AZI2Q9H6S1 392 aa9.2□□□□□ -0.94
PTPRK-206ENST00000368215 CLEC11AQ9Y240 323 aa9.2□□□□□ -0.94
PTPRK-206ENST00000368215 EN1Q05925 392 aaPredicted RBP9.2□□□□□ -0.94
PTPRK-206ENST00000368215 CIAPIN1Q6FI81 312 aa9.2□□□□□ -0.94
PTPRK-206ENST00000368215 ZNF746Q6NUN9 644 aaPredicted RBP9.2□□□□□ -0.94
PTPRK-206ENST00000368215 LDHDQ86WU2 507 aa9.2□□□□□ -0.94
PTPRK-206ENST00000368215 MAGOHBQ96A72 148 aaKnown RBP9.2□□□□□ -0.94
PTPRK-206ENST00000368215 LRRC1Q9BTT6 524 aa9.2□□□□□ -0.94
PTPRK-206ENST00000368215 ZNF408Q9H9D4 720 aa9.2□□□□□ -0.94
PTPRK-206ENST00000368215 EHD2Q9NZN4 543 aa9.2□□□□□ -0.94
PTPRK-206ENST00000368215 GOLGA8KD6RF30 607 aa9.2□□□□□ -0.94
PTPRK-206ENST00000368215 IL1R1P14778 569 aa9.2□□□□□ -0.94
PTPRK-206ENST00000368215 GGCXP38435 758 aa9.2□□□□□ -0.94
PTPRK-206ENST00000368215 MTERF2Q49AM1 385 aa9.2□□□□□ -0.94
PTPRK-206ENST00000368215 ZC2HC1CQ53FD0 456 aaPredicted RBP9.2□□□□□ -0.94
PTPRK-206ENST00000368215 DCAF15Q66K64 600 aa9.2□□□□□ -0.94
PTPRK-206ENST00000368215 SEPT14Q6ZU15 432 aa9.2□□□□□ -0.94
PTPRK-206ENST00000368215 COL23A1Q86Y22 540 aaPredicted RBP9.2□□□□□ -0.94
PTPRK-206ENST00000368215 SPATA4Q8NEY3 305 aa9.2□□□□□ -0.94
PTPRK-206ENST00000368215 CNKSR2Q8WXI2 1034 aa9.2□□□□□ -0.94
PTPRK-206ENST00000368215 EXOC4Q96A65 974 aa9.2□□□□□ -0.94
PTPRK-206ENST00000368215 ZNF653Q96CK0 615 aa9.2□□□□□ -0.94
PTPRK-206ENST00000368215 NT5C1BQ96P26 610 aa9.2□□□□□ -0.94
PTPRK-206ENST00000368215 GOLPH3Q9H4A6 298 aa9.2□□□□□ -0.94
PTPRK-206ENST00000368215 SLC16A4O15374 487 aa9.19□□□□□ -0.94
PTPRK-206ENST00000368215 ECE1P42892 770 aa9.19□□□□□ -0.94
PTPRK-206ENST00000368215 IRX3P78415 501 aaPredicted RBP9.19□□□□□ -0.94
PTPRK-206ENST00000368215 DDR1Q08345 913 aa9.19□□□□□ -0.94
PTPRK-206ENST00000368215 ZNF772Q68DY9 489 aaPredicted RBP9.19□□□□□ -0.94
PTPRK-206ENST00000368215 CATSPER3Q86XQ3 398 aa9.19□□□□□ -0.94
PTPRK-206ENST00000368215 GLYCTKQ8IVS8 523 aa9.19□□□□□ -0.94
PTPRK-206ENST00000368215 PROCA1Q8NCQ7 364 aaPredicted RBP9.19□□□□□ -0.94
PTPRK-206ENST00000368215 RMDN3Q96TC7 470 aa9.19□□□□□ -0.94
PTPRK-206ENST00000368215 AS3MTQ9HBK9 375 aa9.19□□□□□ -0.94
PTPRK-206ENST00000368215 ZSCAN20P17040 1043 aaPredicted RBP9.19□□□□□ -0.94
PTPRK-206ENST00000368215 SMARCA1P28370 1054 aa9.19□□□□□ -0.94
PTPRK-206ENST00000368215 NF2P35240 595 aa9.19□□□□□ -0.94
PTPRK-206ENST00000368215 PLTPP55058 493 aa9.19□□□□□ -0.94
PTPRK-206ENST00000368215 MTMR1Q13613 665 aa9.19□□□□□ -0.94
PTPRK-206ENST00000368215 DRAP1Q14919 205 aaPredicted RBP9.19□□□□□ -0.94
PTPRK-206ENST00000368215 CEP55Q53EZ4 464 aa9.19□□□□□ -0.94
PTPRK-206ENST00000368215 DENND2CQ68D51 928 aa9.19□□□□□ -0.94
PTPRK-206ENST00000368215 ZFPM1Q8IX07 1006 aa9.19□□□□□ -0.94
PTPRK-206ENST00000368215 KIAA0895Q8NCT3 520 aa9.19□□□□□ -0.94
PTPRK-206ENST00000368215 MGARPQ8TDB4 240 aa9.19□□□□□ -0.94
PTPRK-206ENST00000368215 ZNF384Q8TF68 577 aa9.19□□□□□ -0.94
PTPRK-206ENST00000368215 RIN2Q8WYP3 895 aaPredicted RBP9.19□□□□□ -0.94
PTPRK-206ENST00000368215 PNKPQ96T60 521 aa9.19□□□□□ -0.94
PTPRK-206ENST00000368215 RIOX1Q9H6W3 641 aa9.19□□□□□ -0.94
PTPRK-206ENST00000368215 FBXO28Q9NVF7 368 aa9.19□□□□□ -0.94
PTPRK-206ENST00000368215 SNX12Q9UMY4 172 aa9.19□□□□□ -0.94
PTPRK-206ENST00000368215 AGTPBP1Q9UPW5 1226 aa9.19□□□□□ -0.94
PTPRK-206ENST00000368215 ATP8A1Q9Y2Q0 1164 aa9.19□□□□□ -0.94
PTPRK-206ENST00000368215 SPATA31A6Q5VVP1 1343 aa9.19□□□□□ -0.94
PTPRK-206ENST00000368215 LRRC37A3O60309 1634 aa9.19□□□□□ -0.94
PTPRK-206ENST00000368215 RSPH10B2B2RC85 870 aa9.19□□□□□ -0.94
PTPRK-206ENST00000368215 MED24O75448 989 aa9.19□□□□□ -0.94
PTPRK-206ENST00000368215 FGGP02679 453 aa9.19□□□□□ -0.94
PTPRK-206ENST00000368215 RSPH10BP0C881 870 aa9.19□□□□□ -0.94
PTPRK-206ENST00000368215 SPP2Q13103 211 aa9.19□□□□□ -0.94
PTPRK-206ENST00000368215 SEMA3FQ13275 785 aa9.19□□□□□ -0.94
PTPRK-206ENST00000368215 NCAPG2Q86XI2 1143 aa9.19□□□□□ -0.94
PTPRK-206ENST00000368215 RTKN2Q8IZC4 609 aa9.19□□□□□ -0.94
PTPRK-206ENST00000368215 METTL13Q8N6R0 699 aa9.19□□□□□ -0.94
PTPRK-206ENST00000368215 ACER1Q8TDN7 264 aa9.19□□□□□ -0.94
PTPRK-206ENST00000368215 PRMT6Q96LA8 375 aaPredicted RBP9.19□□□□□ -0.94
PTPRK-206ENST00000368215 STMN4Q9H169 189 aaPredicted RBP9.19□□□□□ -0.94
PTPRK-206ENST00000368215 LRRC4BQ9NT99 713 aa9.19□□□□□ -0.94
PTPRK-206ENST00000368215 MKRN1Q9UHC7 482 aaKnown RBP9.19□□□□□ -0.94
PTPRK-206ENST00000368215 IKBKGQ9Y6K9 419 aa9.19□□□□□ -0.94
PTPRK-206ENST00000368215 H2AFXP16104 143 aaPredicted RBP9.19□□□□□ -0.94
PTPRK-206ENST00000368215 INPP5BP32019 993 aa9.19□□□□□ -0.94
PTPRK-206ENST00000368215 MTMR3Q13615 1198 aa9.19□□□□□ -0.94
PTPRK-206ENST00000368215 TTC31Q49AM3 519 aaPredicted RBP9.19□□□□□ -0.94
PTPRK-206ENST00000368215 TAB3Q8N5C8 712 aaPredicted RBP9.19□□□□□ -0.94
PTPRK-206ENST00000368215 ERGIC2Q96RQ1 377 aa9.19□□□□□ -0.94
PTPRK-206ENST00000368215 DDX47Q9H0S4 455 aaKnown RBP9.19□□□□□ -0.94
PTPRK-206ENST00000368215 TMEM206Q9H813 350 aa9.19□□□□□ -0.94
PTPRK-206ENST00000368215 KDM3BQ7LBC6 1761 aa9.18□□□□□ -0.94
PTPRK-206ENST00000368215 EYA4O95677 639 aa9.18□□□□□ -0.94
PTPRK-206ENST00000368215 IFNB1P01574 187 aa9.18□□□□□ -0.94
PTPRK-206ENST00000368215 SHMT1P34896 483 aa9.18□□□□□ -0.94
PTPRK-206ENST00000368215 MFAP3P55082 362 aa9.18□□□□□ -0.94
PTPRK-206ENST00000368215 ZNF211Q13398 564 aaPredicted RBP9.18□□□□□ -0.94
PTPRK-206ENST00000368215 SNX1Q13596 522 aa9.18□□□□□ -0.94
PTPRK-206ENST00000368215 RNF207Q6ZRF8 634 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms