RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 ADCY5O95622 1261 aa13.42□□□□□ -0.26
USF1-203ENST00000368021 CD44P16070 742 aaKnown RBP13.42□□□□□ -0.26
USF1-203ENST00000368021 KCNA2P16389 499 aa13.42□□□□□ -0.26
USF1-203ENST00000368021 PPP1R2P41236 205 aa13.42□□□□□ -0.26
USF1-203ENST00000368021 PSMC6P62333 389 aa13.42□□□□□ -0.26
USF1-203ENST00000368021 DNAJC19Q96DA6 116 aa13.42□□□□□ -0.26
USF1-203ENST00000368021 NACC1Q96RE7 527 aa13.42□□□□□ -0.26
USF1-203ENST00000368021 PKD2L1Q9P0L9 805 aa13.42□□□□□ -0.26
USF1-203ENST00000368021 WDR64B1ANS9 1081 aa13.41□□□□□ -0.26
USF1-203ENST00000368021 DDX39AO00148 427 aaKnown RBP13.41□□□□□ -0.26
USF1-203ENST00000368021 AP5Z1O43299 807 aa13.41□□□□□ -0.26
USF1-203ENST00000368021 CYP11B2P19099 503 aa13.41□□□□□ -0.26
USF1-203ENST00000368021 GRK4P32298 578 aa13.41□□□□□ -0.26
USF1-203ENST00000368021 PRMT2P55345 433 aa13.41□□□□□ -0.26
USF1-203ENST00000368021 EHHADHQ08426 723 aa13.41□□□□□ -0.26
USF1-203ENST00000368021 PDE4DQ08499 809 aa13.41□□□□□ -0.26
USF1-203ENST00000368021 PSMD2Q13200 908 aa13.41□□□□□ -0.26
USF1-203ENST00000368021 STIM1Q13586 685 aa13.41□□□□□ -0.26
USF1-203ENST00000368021 CTTNQ14247 550 aaKnown RBP13.41□□□□□ -0.26
USF1-203ENST00000368021 GPBP1Q86WP2 473 aa13.41□□□□□ -0.26
USF1-203ENST00000368021 TPH2Q8IWU9 490 aa13.41□□□□□ -0.26
USF1-203ENST00000368021 SMYD4Q8IYR2 804 aaPredicted RBP13.41□□□□□ -0.26
USF1-203ENST00000368021 MORC4Q8TE76 937 aa13.41□□□□□ -0.26
USF1-203ENST00000368021 FGD4Q96M96 766 aa13.41□□□□□ -0.26
USF1-203ENST00000368021 LXNQ9BS40 222 aa13.41□□□□□ -0.26
USF1-203ENST00000368021 HSD3B7Q9H2F3 369 aa13.41□□□□□ -0.26
USF1-203ENST00000368021 ZSWIM4Q9H7M6 989 aa13.41□□□□□ -0.26
USF1-203ENST00000368021 LRRC37A2A6NM11 1700 aa13.41□□□□□ -0.26
USF1-203ENST00000368021 FRMD3A2A2Y4 597 aa13.41□□□□□ -0.26
USF1-203ENST00000368021 LYPLA2O95372 231 aa13.41□□□□□ -0.26
USF1-203ENST00000368021 PGK2P07205 417 aa13.41□□□□□ -0.26
USF1-203ENST00000368021 TGFB3P10600 412 aa13.41□□□□□ -0.26
USF1-203ENST00000368021 ADORA2AP29274 412 aa13.41□□□□□ -0.26
USF1-203ENST00000368021 GTF2F1P35269 517 aaKnown RBP eCLIP13.41□□□□□ -0.26
USF1-203ENST00000368021 PLCB2Q00722 1185 aa13.41□□□□□ -0.26
USF1-203ENST00000368021 CCL14Q16627 93 aa13.41□□□□□ -0.26
USF1-203ENST00000368021 MORN1Q5T089 497 aa13.41□□□□□ -0.26
USF1-203ENST00000368021 DYMQ7RTS9 669 aa13.41□□□□□ -0.26
USF1-203ENST00000368021 DPP9Q86TI2 863 aa13.41□□□□□ -0.26
USF1-203ENST00000368021 ADSSL1Q8N142 457 aa13.41□□□□□ -0.26
USF1-203ENST00000368021 BHMT2Q9H2M3 363 aa13.41□□□□□ -0.26
USF1-203ENST00000368021 KCND2Q9NZV8 630 aa13.41□□□□□ -0.26
USF1-203ENST00000368021 RWDD2AQ9UIY3 292 aa13.41□□□□□ -0.26
USF1-203ENST00000368021 ZHX1Q9UKY1 873 aaPredicted RBP13.41□□□□□ -0.26
USF1-203ENST00000368021 GDAQ9Y2T3 454 aa13.41□□□□□ -0.26
USF1-203ENST00000368021 CCNE2O96020 404 aa13.4□□□□□ -0.26
USF1-203ENST00000368021 SSBP05455 408 aaKnown RBP eCLIP13.4□□□□□ -0.26
USF1-203ENST00000368021 PRCPP42785 496 aa13.4□□□□□ -0.26
USF1-203ENST00000368021 QARSP47897 775 aaKnown RBP13.4□□□□□ -0.26
USF1-203ENST00000368021 GABPB1Q06547 395 aaPredicted RBP13.4□□□□□ -0.26
USF1-203ENST00000368021 PAK1Q13153 545 aa13.4□□□□□ -0.26
USF1-203ENST00000368021 ARSHQ5FYA8 562 aa13.4□□□□□ -0.26
USF1-203ENST00000368021 DNTTIP2Q5QJE6 756 aaKnown RBP13.4□□□□□ -0.26
USF1-203ENST00000368021 SOCS4Q8WXH5 440 aa13.4□□□□□ -0.26
USF1-203ENST00000368021 MED15Q96RN5 788 aa13.4□□□□□ -0.26
USF1-203ENST00000368021 JPH1Q9HDC5 661 aaPredicted RBP13.4□□□□□ -0.26
USF1-203ENST00000368021 SAMM50Q9Y512 469 aa13.4□□□□□ -0.26
USF1-203ENST00000368021 PCDHA10Q9Y5I2 948 aa13.4□□□□□ -0.26
USF1-203ENST00000368021 SYNRGQ9UMZ2 1314 aa13.4□□□□□ -0.26
USF1-203ENST00000368021 PLXNB2O15031 1838 aa13.39□□□□□ -0.27
USF1-203ENST00000368021 SLC15A5A6NIM6 579 aa13.39□□□□□ -0.27
USF1-203ENST00000368021 RGS2P41220 211 aa13.39□□□□□ -0.27
USF1-203ENST00000368021 STK4Q13043 487 aa13.39□□□□□ -0.27
USF1-203ENST00000368021 TRIM32Q13049 653 aa13.39□□□□□ -0.27
USF1-203ENST00000368021 MAP2K5Q13163 448 aa13.39□□□□□ -0.27
USF1-203ENST00000368021 GRB14Q14449 540 aa13.39□□□□□ -0.27
USF1-203ENST00000368021 MTFR1Q15390 333 aa13.39□□□□□ -0.27
USF1-203ENST00000368021 SPATA1Q5VX52 437 aa13.39□□□□□ -0.27
USF1-203ENST00000368021 KCNV1Q6PIU1 500 aa13.39□□□□□ -0.27
USF1-203ENST00000368021 CCDC65Q8IXS2 484 aa13.39□□□□□ -0.27
USF1-203ENST00000368021 C4orf19Q8IY42 314 aa13.39□□□□□ -0.27
USF1-203ENST00000368021 PDCL2Q8N4E4 241 aa13.39□□□□□ -0.27
USF1-203ENST00000368021 BANK1Q8NDB2 785 aa13.39□□□□□ -0.27
USF1-203ENST00000368021 TRIM5Q9C035 493 aa13.39□□□□□ -0.27
USF1-203ENST00000368021 WRAP73Q9P2S5 460 aaPredicted RBP13.39□□□□□ -0.27
USF1-203ENST00000368021 SLC9A2Q9UBY0 812 aa13.39□□□□□ -0.27
USF1-203ENST00000368021 R3HCC1Q9Y3T6 440 aaKnown RBP13.39□□□□□ -0.27
USF1-203ENST00000368021 NFE2L3Q9Y4A8 694 aa13.39□□□□□ -0.27
USF1-203ENST00000368021 KIAA0100Q14667 2235 aaKnown RBP13.39□□□□□ -0.27
USF1-203ENST00000368021 ASB14A6NK59 587 aa13.39□□□□□ -0.27
USF1-203ENST00000368021 PSMA7O14818 248 aa13.39□□□□□ -0.27
USF1-203ENST00000368021 COBLO75128 1261 aa13.39□□□□□ -0.27
USF1-203ENST00000368021 IDEP14735 1019 aa13.39□□□□□ -0.27
USF1-203ENST00000368021 ZNF18P17022 549 aa13.39□□□□□ -0.27
USF1-203ENST00000368021 PSMC5P62195 406 aa13.39□□□□□ -0.27
USF1-203ENST00000368021 IRF5Q13568 498 aa13.39□□□□□ -0.27
USF1-203ENST00000368021 KLHL10Q6JEL2 608 aa13.39□□□□□ -0.27
USF1-203ENST00000368021 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.39□□□□□ -0.27
USF1-203ENST00000368021 NPLOC4Q8TAT6 608 aa13.39□□□□□ -0.27
USF1-203ENST00000368021 PIGOQ8TEQ8 1089 aa13.39□□□□□ -0.27
USF1-203ENST00000368021 TRIB2Q92519 343 aa13.39□□□□□ -0.27
USF1-203ENST00000368021 USP6NLQ92738 828 aa13.39□□□□□ -0.27
USF1-203ENST00000368021 DHTKD1Q96HY7 919 aaPredicted RBP13.39□□□□□ -0.27
USF1-203ENST00000368021 YY1AP1Q9H869 796 aa13.39□□□□□ -0.27
USF1-203ENST00000368021 PANK4Q9NVE7 773 aa13.39□□□□□ -0.27
USF1-203ENST00000368021 FANCLQ9NW38 375 aa13.39□□□□□ -0.27
USF1-203ENST00000368021 DBR1Q9UK59 544 aaKnown RBP13.39□□□□□ -0.27
USF1-203ENST00000368021 WDR81Q562E7 1941 aa13.38□□□□□ -0.27
USF1-203ENST00000368021 DKC1O60832 514 aaKnown RBP eCLIP13.38□□□□□ -0.27
USF1-203ENST00000368021 INHAP05111 366 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms