RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 CTNND1O60716 968 aaKnown RBP17.71■□□□□ 0.42
SCAF1-201ENST00000360565 GBP1P32455 592 aa17.71■□□□□ 0.42
SCAF1-201ENST00000360565 ZNF131P52739 623 aa17.71■□□□□ 0.42
SCAF1-201ENST00000360565 GLE1Q53GS7 698 aaKnown RBP17.71■□□□□ 0.42
SCAF1-201ENST00000360565 PRR5LQ6MZQ0 368 aa17.71■□□□□ 0.42
SCAF1-201ENST00000360565 DYDC2Q96IM9 177 aa17.71■□□□□ 0.42
SCAF1-201ENST00000360565 RSRC1Q96IZ7 334 aaKnown RBP17.71■□□□□ 0.42
SCAF1-201ENST00000360565 TRIM6Q9C030 488 aaPredicted RBP17.71■□□□□ 0.42
SCAF1-201ENST00000360565 TYW1Q9NV66 732 aaKnown RBP17.71■□□□□ 0.42
SCAF1-201ENST00000360565 TRPC6Q9Y210 931 aa17.71■□□□□ 0.42
SCAF1-201ENST00000360565 CCDC188H7C350 402 aa17.7■□□□□ 0.42
SCAF1-201ENST00000360565 ADGRA1Q86SQ6 560 aa17.7■□□□□ 0.42
SCAF1-201ENST00000360565 IL17RAQ96F46 866 aa17.7■□□□□ 0.42
SCAF1-201ENST00000360565 ZMYND12Q9H0C1 365 aa17.7■□□□□ 0.42
SCAF1-201ENST00000360565 PDXDC1Q6P996 788 aa17.7■□□□□ 0.42
SCAF1-201ENST00000360565 C21orf2O43822 256 aa17.7■□□□□ 0.42
SCAF1-201ENST00000360565 GCLMP48507 274 aa17.7■□□□□ 0.42
SCAF1-201ENST00000360565 USP11P51784 963 aa17.7■□□□□ 0.42
SCAF1-201ENST00000360565 SLC8A3P57103 927 aa17.7■□□□□ 0.42
SCAF1-201ENST00000360565 ZNF341Q9BYN7 854 aa17.7■□□□□ 0.42
SCAF1-201ENST00000360565 TCRBV5S4A2TA0A5A2 114 aa17.69■□□□□ 0.42
SCAF1-201ENST00000360565 DR1Q01658 176 aa17.69■□□□□ 0.42
SCAF1-201ENST00000360565 BFSP1Q12934 665 aa17.69■□□□□ 0.42
SCAF1-201ENST00000360565 BANK1Q8NDB2 785 aa17.69■□□□□ 0.42
SCAF1-201ENST00000360565 COG1Q8WTW3 980 aa17.69■□□□□ 0.42
SCAF1-201ENST00000360565 KLHL14Q9P2G3 628 aa17.69■□□□□ 0.42
SCAF1-201ENST00000360565 PDHBP11177 359 aa17.69■□□□□ 0.42
SCAF1-201ENST00000360565 ADCY1Q08828 1119 aa17.69■□□□□ 0.42
SCAF1-201ENST00000360565 DDX47Q9H0S4 455 aaKnown RBP17.69■□□□□ 0.42
SCAF1-201ENST00000360565 SNX12Q9UMY4 172 aa17.69■□□□□ 0.42
SCAF1-201ENST00000360565 TFR2Q9UP52 801 aa17.69■□□□□ 0.42
SCAF1-201ENST00000360565 SALL1Q9NSC2 1324 aa17.69■□□□□ 0.42
SCAF1-201ENST00000360565 NPHP3-ACAD11A0A0J9YXS1 232 aa17.69■□□□□ 0.42
SCAF1-201ENST00000360565 ASNSP08243 561 aa17.69■□□□□ 0.42
SCAF1-201ENST00000360565 HSPA6P17066 643 aa17.69■□□□□ 0.42
SCAF1-201ENST00000360565 RC3H1Q5TC82 1133 aaKnown RBP17.69■□□□□ 0.42
SCAF1-201ENST00000360565 PALM2Q8IXS6 379 aa17.69■□□□□ 0.42
SCAF1-201ENST00000360565 SLC17A8Q8NDX2 589 aa17.69■□□□□ 0.42
SCAF1-201ENST00000360565 EDEM3Q9BZQ6 932 aa17.69■□□□□ 0.42
SCAF1-201ENST00000360565 ZNF408Q9H9D4 720 aa17.69■□□□□ 0.42
SCAF1-201ENST00000360565 RGL1Q9NZL6 768 aa17.69■□□□□ 0.42
SCAF1-201ENST00000360565 YWHAEP62258 255 aaKnown RBP17.68■□□□□ 0.42
SCAF1-201ENST00000360565 CYP4F22Q6NT55 531 aa17.68■□□□□ 0.42
SCAF1-201ENST00000360565 APBB1IPQ7Z5R6 666 aaPredicted RBP17.68■□□□□ 0.42
SCAF1-201ENST00000360565 NOA1Q8NC60 698 aaKnown RBP17.68■□□□□ 0.42
SCAF1-201ENST00000360565 NEK9Q8TD19 979 aa17.68■□□□□ 0.42
SCAF1-201ENST00000360565 STK38LQ9Y2H1 464 aa17.68■□□□□ 0.42
SCAF1-201ENST00000360565 CSADQ9Y600 493 aa17.68■□□□□ 0.42
SCAF1-201ENST00000360565 ECEL1O95672 775 aa17.68■□□□□ 0.42
SCAF1-201ENST00000360565 CUL1Q13616 776 aa17.68■□□□□ 0.42
SCAF1-201ENST00000360565 MTERF2Q49AM1 385 aa17.68■□□□□ 0.42
SCAF1-201ENST00000360565 SCYL2Q6P3W7 929 aa17.68■□□□□ 0.42
SCAF1-201ENST00000360565 CASC4Q6P4E1 433 aa17.68■□□□□ 0.42
SCAF1-201ENST00000360565 C16orf86Q6ZW13 317 aa17.68■□□□□ 0.42
SCAF1-201ENST00000360565 PLAAQ9Y263 795 aa17.68■□□□□ 0.42
SCAF1-201ENST00000360565 KLK7P49862 253 aa17.68■□□□□ 0.42
SCAF1-201ENST00000360565 RASA3Q14644 834 aa17.68■□□□□ 0.42
SCAF1-201ENST00000360565 HADHQ16836 314 aaKnown RBP17.68■□□□□ 0.42
SCAF1-201ENST00000360565 PADI6Q6TGC4 694 aa17.68■□□□□ 0.42
SCAF1-201ENST00000360565 P3H4Q92791 437 aa17.68■□□□□ 0.42
SCAF1-201ENST00000360565 NRBP2Q9NSY0 501 aa17.68■□□□□ 0.42
SCAF1-201ENST00000360565 TNNC2P02585 160 aa17.68■□□□□ 0.42
SCAF1-201ENST00000360565 TRIM49P0CI25 452 aa17.68■□□□□ 0.42
SCAF1-201ENST00000360565 TRIM49CP0CI26 452 aa17.68■□□□□ 0.42
SCAF1-201ENST00000360565 PRELPP51888 382 aa17.68■□□□□ 0.42
SCAF1-201ENST00000360565 RHOT2Q8IXI1 618 aa17.68■□□□□ 0.42
SCAF1-201ENST00000360565 SP8Q8IXZ3 490 aa17.68■□□□□ 0.42
SCAF1-201ENST00000360565 LRRC1Q9BTT6 524 aa17.68■□□□□ 0.42
SCAF1-201ENST00000360565 FAM217BQ9NTX9 383 aaPredicted RBP17.68■□□□□ 0.42
SCAF1-201ENST00000360565 SNX24Q9Y343 169 aa17.68■□□□□ 0.42
SCAF1-201ENST00000360565 POC1B-GALNT4F8VUJ3 575 aa17.67■□□□□ 0.42
SCAF1-201ENST00000360565 ECE2O60344 883 aa17.67■□□□□ 0.42
SCAF1-201ENST00000360565 POLR2BP30876 1174 aaKnown RBP17.67■□□□□ 0.42
SCAF1-201ENST00000360565 DRAP1Q14919 205 aaPredicted RBP17.67■□□□□ 0.42
SCAF1-201ENST00000360565 TXNRD3Q86VQ6 643 aa17.67■□□□□ 0.42
SCAF1-201ENST00000360565 NCAPG2Q86XI2 1143 aa17.67■□□□□ 0.42
SCAF1-201ENST00000360565 ARHGEF2Q92974 986 aaKnown RBP17.67■□□□□ 0.42
SCAF1-201ENST00000360565 PSMD1Q99460 953 aa17.67■□□□□ 0.42
SCAF1-201ENST00000360565 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.67■□□□□ 0.42
SCAF1-201ENST00000360565 DAPK3O43293 454 aa17.67■□□□□ 0.42
SCAF1-201ENST00000360565 TRIP13Q15645 432 aaPredicted RBP17.67■□□□□ 0.42
SCAF1-201ENST00000360565 BRDTQ58F21 947 aaPredicted RBP17.67■□□□□ 0.42
SCAF1-201ENST00000360565 CFAP157Q5JU67 520 aa17.67■□□□□ 0.42
SCAF1-201ENST00000360565 TTC16Q8NEE8 873 aa17.67■□□□□ 0.42
SCAF1-201ENST00000360565 STMN2Q93045 179 aa17.67■□□□□ 0.42
SCAF1-201ENST00000360565 DCAF8L1A6NGE4 600 aa17.67■□□□□ 0.42
SCAF1-201ENST00000360565 MYO1CO00159 1063 aa17.67■□□□□ 0.42
SCAF1-201ENST00000360565 CCDC14Q49A88 953 aa17.67■□□□□ 0.42
SCAF1-201ENST00000360565 ANKRD20A3Q5VUR7 823 aa17.67■□□□□ 0.42
SCAF1-201ENST00000360565 GLYCTKQ8IVS8 523 aa17.67■□□□□ 0.42
SCAF1-201ENST00000360565 XXYLT1Q8NBI6 393 aa17.67■□□□□ 0.42
SCAF1-201ENST00000360565 EIF2AK1Q9BQI3 630 aaKnown RBP17.67■□□□□ 0.42
SCAF1-201ENST00000360565 PDS5AQ29RF7 1337 aaKnown RBP17.67■□□□□ 0.42
SCAF1-201ENST00000360565 STAM2O75886 525 aa17.66■□□□□ 0.42
SCAF1-201ENST00000360565 ITIH3Q06033 890 aa17.66■□□□□ 0.42
SCAF1-201ENST00000360565 PPP2R5AQ15172 486 aa17.66■□□□□ 0.42
SCAF1-201ENST00000360565 ZKSCAN8Q15776 578 aaPredicted RBP17.66■□□□□ 0.42
SCAF1-201ENST00000360565 BSPRYQ5W0U4 402 aa17.66■□□□□ 0.42
SCAF1-201ENST00000360565 A0A087WUV0 522 aaPredicted RBP17.66■□□□□ 0.42
SCAF1-201ENST00000360565 RNF8O76064 485 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms