RNA–Protein interactions for RNA: ENST00000347652.6

VCAM1-202, Transcript of vascular cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene VCAM1, Length 2,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-202ENST00000347652 NTRK3Q16288 839 aa5.83□□□□□ -1.48
VCAM1-202ENST00000347652 RTN1Q16799 776 aa5.83□□□□□ -1.48
VCAM1-202ENST00000347652 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.83□□□□□ -1.48
VCAM1-202ENST00000347652 DNAH12Q6ZR08 3092 aa5.83□□□□□ -1.48
VCAM1-202ENST00000347652 ZNF296Q8WUU4 475 aaPredicted RBP5.83□□□□□ -1.48
VCAM1-202ENST00000347652 C12orf42Q96LP6 360 aa5.83□□□□□ -1.48
VCAM1-202ENST00000347652 DMRTB1Q96MA1 342 aa5.83□□□□□ -1.48
VCAM1-202ENST00000347652 ZNF830Q96NB3 372 aaPredicted RBP5.83□□□□□ -1.48
VCAM1-202ENST00000347652 NCOA5Q9HCD5 579 aaKnown RBP5.83□□□□□ -1.48
VCAM1-202ENST00000347652 CCDC196A0A1B0GTZ2 297 aa5.83□□□□□ -1.48
VCAM1-202ENST00000347652 CTDNEP1O95476 244 aa5.83□□□□□ -1.48
VCAM1-202ENST00000347652 PARP1P09874 1014 aaKnown RBP5.83□□□□□ -1.48
VCAM1-202ENST00000347652 CTGFP29279 349 aa5.83□□□□□ -1.48
VCAM1-202ENST00000347652 KIF5BP33176 963 aa5.83□□□□□ -1.48
VCAM1-202ENST00000347652 TAF1CQ15572 869 aaPredicted RBP5.83□□□□□ -1.48
VCAM1-202ENST00000347652 ASPRV1Q53RT3 343 aa5.83□□□□□ -1.48
VCAM1-202ENST00000347652 ZC3H12AQ5D1E8 599 aaKnown RBP5.83□□□□□ -1.48
VCAM1-202ENST00000347652 HYIQ5T013 277 aa5.83□□□□□ -1.48
VCAM1-202ENST00000347652 FAM180BQ6P0A1 224 aa5.83□□□□□ -1.48
VCAM1-202ENST00000347652 EEPD1Q7L9B9 569 aa5.83□□□□□ -1.48
VCAM1-202ENST00000347652 CCDC83Q8IWF9 413 aa5.83□□□□□ -1.48
VCAM1-202ENST00000347652 STAG2Q8N3U4 1231 aa5.83□□□□□ -1.48
VCAM1-202ENST00000347652 CTCFLQ8NI51 663 aaPredicted RBP5.83□□□□□ -1.48
VCAM1-202ENST00000347652 LPAR1Q92633 364 aa5.83□□□□□ -1.48
VCAM1-202ENST00000347652 HVCN1Q96D96 273 aa5.83□□□□□ -1.48
VCAM1-202ENST00000347652 C2orf49Q9BVC5 232 aaPredicted RBP5.83□□□□□ -1.48
VCAM1-202ENST00000347652 ARHGAP39Q9C0H5 1083 aa5.83□□□□□ -1.48
VCAM1-202ENST00000347652 PLCB1Q9NQ66 1216 aa5.83□□□□□ -1.48
VCAM1-202ENST00000347652 SH3GLB2Q9NR46 395 aa5.83□□□□□ -1.48
VCAM1-202ENST00000347652 TMEM63CQ9P1W3 806 aa5.83□□□□□ -1.48
VCAM1-202ENST00000347652 GTF2IRD1Q9UHL9 959 aa5.83□□□□□ -1.48
VCAM1-202ENST00000347652 FEZ2Q9UHY8 353 aaPredicted RBP5.83□□□□□ -1.48
VCAM1-202ENST00000347652 CPA4Q9UI42 421 aa5.83□□□□□ -1.48
VCAM1-202ENST00000347652 GPR25O00155 361 aa5.82□□□□□ -1.48
VCAM1-202ENST00000347652 PDPK1O15530 556 aa5.82□□□□□ -1.48
VCAM1-202ENST00000347652 CA12O43570 354 aa5.82□□□□□ -1.48
VCAM1-202ENST00000347652 PLEKHA8P1O95397 391 aa5.82□□□□□ -1.48
VCAM1-202ENST00000347652 ECEL1O95672 775 aa5.82□□□□□ -1.48
VCAM1-202ENST00000347652 BMP3P12645 472 aa5.82□□□□□ -1.48
VCAM1-202ENST00000347652 SMARCA1P28370 1054 aa5.82□□□□□ -1.48
VCAM1-202ENST00000347652 CASP2P42575 452 aa5.82□□□□□ -1.48
VCAM1-202ENST00000347652 SLC1A4P43007 532 aa5.82□□□□□ -1.48
VCAM1-202ENST00000347652 GNAQP50148 359 aa5.82□□□□□ -1.48
VCAM1-202ENST00000347652 FUT2Q10981 343 aa5.82□□□□□ -1.48
VCAM1-202ENST00000347652 DDR2Q16832 855 aa5.82□□□□□ -1.48
VCAM1-202ENST00000347652 ATP13A4Q4VNC1 1196 aa5.82□□□□□ -1.48
VCAM1-202ENST00000347652 C1orf53Q5VUE5 145 aa5.82□□□□□ -1.48
VCAM1-202ENST00000347652 C1orf228Q6PIY5 440 aa5.82□□□□□ -1.48
VCAM1-202ENST00000347652 TMTC3Q6ZXV5 915 aa5.82□□□□□ -1.48
VCAM1-202ENST00000347652 KCTD1Q719H9 257 aa5.82□□□□□ -1.48
VCAM1-202ENST00000347652 ANKRD23Q86SG2 305 aa5.82□□□□□ -1.48
VCAM1-202ENST00000347652 TCEAL8Q8IYN2 117 aa5.82□□□□□ -1.48
VCAM1-202ENST00000347652 AFAP1L2Q8N4X5 818 aa5.82□□□□□ -1.48
VCAM1-202ENST00000347652 SRBD1Q8N5C6 995 aaKnown RBP5.82□□□□□ -1.48
VCAM1-202ENST00000347652 NSUN7Q8NE18 718 aaKnown RBP5.82□□□□□ -1.48
VCAM1-202ENST00000347652 PJA1Q8NG27 643 aa5.82□□□□□ -1.48
VCAM1-202ENST00000347652 SMARCC2Q8TAQ2 1214 aa5.82□□□□□ -1.48
VCAM1-202ENST00000347652 SH3KBP1Q96B97 665 aa5.82□□□□□ -1.48
VCAM1-202ENST00000347652 INTS4Q96HW7 963 aaKnown RBP5.82□□□□□ -1.48
VCAM1-202ENST00000347652 NUP88Q99567 741 aaPredicted RBP5.82□□□□□ -1.48
VCAM1-202ENST00000347652 LZTS2Q9BRK4 669 aa5.82□□□□□ -1.48
VCAM1-202ENST00000347652 LLPHQ9BRT6 129 aaKnown RBP5.82□□□□□ -1.48
VCAM1-202ENST00000347652 FBXO2Q9UK22 296 aaPredicted RBP5.82□□□□□ -1.48
VCAM1-202ENST00000347652 TMCC3Q9ULS5 477 aa5.82□□□□□ -1.48
VCAM1-202ENST00000347652 POLIQ9UNA4 740 aa5.82□□□□□ -1.48
VCAM1-202ENST00000347652 PCDHGA11Q9Y5H2 935 aa5.82□□□□□ -1.48
VCAM1-202ENST00000347652 FRMPD2Q68DX3 1309 aaPredicted RBP5.82□□□□□ -1.48
VCAM1-202ENST00000347652 WDR46O15213 610 aaKnown RBP5.82□□□□□ -1.48
VCAM1-202ENST00000347652 PLA2G6O60733 806 aa5.82□□□□□ -1.48
VCAM1-202ENST00000347652 GOLGA8HP0CJ92 632 aa5.82□□□□□ -1.48
VCAM1-202ENST00000347652 NCAM1P13591 858 aa5.82□□□□□ -1.48
VCAM1-202ENST00000347652 IFNAR1P17181 557 aa5.82□□□□□ -1.48
VCAM1-202ENST00000347652 NAT1P18440 290 aa5.82□□□□□ -1.48
VCAM1-202ENST00000347652 INHBEP58166 350 aa5.82□□□□□ -1.48
VCAM1-202ENST00000347652 GRM3Q14832 879 aa5.82□□□□□ -1.48
VCAM1-202ENST00000347652 SLC35G1Q2M3R5 365 aa5.82□□□□□ -1.48
VCAM1-202ENST00000347652 C6orf132Q5T0Z8 1188 aa5.82□□□□□ -1.48
VCAM1-202ENST00000347652 C6orf118Q5T5N4 469 aa5.82□□□□□ -1.48
VCAM1-202ENST00000347652 JAKMIP3Q5VZ66 844 aa5.82□□□□□ -1.48
VCAM1-202ENST00000347652 BTNL9Q6UXG8 535 aa5.82□□□□□ -1.48
VCAM1-202ENST00000347652 CMTR1Q8N1G2 835 aaKnown RBP5.82□□□□□ -1.48
VCAM1-202ENST00000347652 IPO9Q96P70 1041 aaKnown RBP5.82□□□□□ -1.48
VCAM1-202ENST00000347652 RIOX1Q9H6W3 641 aa5.82□□□□□ -1.48
VCAM1-202ENST00000347652 OSGEPQ9NPF4 335 aa5.82□□□□□ -1.48
VCAM1-202ENST00000347652 UBP1Q9NZI7 540 aa5.82□□□□□ -1.48
VCAM1-202ENST00000347652 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.82□□□□□ -1.48
VCAM1-202ENST00000347652 ADGRA2Q96PE1 1338 aa5.82□□□□□ -1.48
VCAM1-202ENST00000347652 KLRF2D3W0D1 207 aa5.81□□□□□ -1.48
VCAM1-202ENST00000347652 VCAM1P19320 739 aa5.81□□□□□ -1.48
VCAM1-202ENST00000347652 ATP1A2P50993 1020 aa5.81□□□□□ -1.48
VCAM1-202ENST00000347652 MTA1Q13330 715 aa5.81□□□□□ -1.48
VCAM1-202ENST00000347652 TCEA2Q15560 299 aa5.81□□□□□ -1.48
VCAM1-202ENST00000347652 MTERF2Q49AM1 385 aa5.81□□□□□ -1.48
VCAM1-202ENST00000347652 COBLL1Q53SF7 1204 aa5.81□□□□□ -1.48
VCAM1-202ENST00000347652 TTBK2Q6IQ55 1244 aa5.81□□□□□ -1.48
VCAM1-202ENST00000347652 MMS22LQ6ZRQ5 1243 aa5.81□□□□□ -1.48
VCAM1-202ENST00000347652 CD99L2Q8TCZ2 262 aa5.81□□□□□ -1.48
VCAM1-202ENST00000347652 SEC16BQ96JE7 1060 aa5.81□□□□□ -1.48
VCAM1-202ENST00000347652 SPZ1Q9BXG8 430 aa5.81□□□□□ -1.48
VCAM1-202ENST00000347652 ASCC2Q9H1I8 757 aaPredicted RBP5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms