RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 KCTD6Q8NC69 237 aa18.62■□□□□ 0.57
CDCP1-201ENST00000296129 NSUN4Q96CB9 384 aaKnown RBP18.62■□□□□ 0.57
CDCP1-201ENST00000296129 HEXIM2Q96MH2 286 aaKnown RBP18.62■□□□□ 0.57
CDCP1-201ENST00000296129 ADAMTS1Q9UHI8 967 aa18.62■□□□□ 0.57
CDCP1-201ENST00000296129 TACC3Q9Y6A5 838 aa18.62■□□□□ 0.57
CDCP1-201ENST00000296129 LGALS16A8MUM7 142 aa18.62■□□□□ 0.57
CDCP1-201ENST00000296129 GARSP41250 739 aaKnown RBP18.62■□□□□ 0.57
CDCP1-201ENST00000296129 NKX1-1Q15270 411 aaPredicted RBP18.62■□□□□ 0.57
CDCP1-201ENST00000296129 PADI6Q6TGC4 694 aa18.62■□□□□ 0.57
CDCP1-201ENST00000296129 LMNTD2Q8IXW0 634 aa18.62■□□□□ 0.57
CDCP1-201ENST00000296129 CDKL2Q92772 493 aa18.62■□□□□ 0.57
CDCP1-201ENST00000296129 AP1M1Q9BXS5 423 aa18.62■□□□□ 0.57
CDCP1-201ENST00000296129 POLD4Q9HCU8 107 aa18.62■□□□□ 0.57
CDCP1-201ENST00000296129 NR3C1P04150 777 aa18.62■□□□□ 0.57
CDCP1-201ENST00000296129 AKR1B1P15121 316 aa18.62■□□□□ 0.57
CDCP1-201ENST00000296129 RASSF2P50749 326 aa18.62■□□□□ 0.57
CDCP1-201ENST00000296129 SLFN12LQ6IEE8 588 aa18.62■□□□□ 0.57
CDCP1-201ENST00000296129 WDR70Q9NW82 654 aa18.62■□□□□ 0.57
CDCP1-201ENST00000296129 ANAPC5Q9UJX4 755 aa18.62■□□□□ 0.57
CDCP1-201ENST00000296129 MCF2LO15068 1137 aa18.62■□□□□ 0.57
CDCP1-201ENST00000296129 EXOSC10Q01780 885 aaKnown RBP18.62■□□□□ 0.57
CDCP1-201ENST00000296129 SURF1Q15526 300 aa18.62■□□□□ 0.57
CDCP1-201ENST00000296129 STXBP2Q15833 593 aa18.62■□□□□ 0.57
CDCP1-201ENST00000296129 ABHD10Q9NUJ1 306 aa18.62■□□□□ 0.57
CDCP1-201ENST00000296129 INHBAP08476 426 aa18.61■□□□□ 0.57
CDCP1-201ENST00000296129 RNF14Q9UBS8 474 aa18.61■□□□□ 0.57
CDCP1-201ENST00000296129 F5H6K3 240 aa18.61■□□□□ 0.57
CDCP1-201ENST00000296129 CHGBP05060 677 aa18.61■□□□□ 0.57
CDCP1-201ENST00000296129 KLRC3Q07444 240 aa18.61■□□□□ 0.57
CDCP1-201ENST00000296129 PARD6BQ9BYG5 372 aa18.61■□□□□ 0.57
CDCP1-201ENST00000296129 IFT122Q9HBG6 1241 aa18.61■□□□□ 0.57
CDCP1-201ENST00000296129 DNAJC12Q9UKB3 198 aa18.61■□□□□ 0.57
CDCP1-201ENST00000296129 SPDYE16A6NNV3 312 aaPredicted RBP18.61■□□□□ 0.57
CDCP1-201ENST00000296129 TRIP13Q15645 432 aaPredicted RBP18.61■□□□□ 0.57
CDCP1-201ENST00000296129 SPDYE2Q495Y8 402 aa18.61■□□□□ 0.57
CDCP1-201ENST00000296129 ALKBH5Q6P6C2 394 aaKnown RBP18.61■□□□□ 0.57
CDCP1-201ENST00000296129 CEP72Q9P209 647 aa18.61■□□□□ 0.57
CDCP1-201ENST00000296129 RSRC2Q7L4I2 434 aaKnown RBP18.61■□□□□ 0.57
CDCP1-201ENST00000296129 LRRC8CQ8TDW0 803 aa18.61■□□□□ 0.57
CDCP1-201ENST00000296129 FAM20AQ96MK3 541 aa18.61■□□□□ 0.57
CDCP1-201ENST00000296129 BAIAP2L1Q9UHR4 511 aa18.61■□□□□ 0.57
CDCP1-201ENST00000296129 POTEFA5A3E0 1075 aa18.61■□□□□ 0.57
CDCP1-201ENST00000296129 TDP2O95551 362 aa18.61■□□□□ 0.57
CDCP1-201ENST00000296129 POTEIP0CG38 1075 aa18.61■□□□□ 0.57
CDCP1-201ENST00000296129 SLC7A5Q01650 507 aa18.61■□□□□ 0.57
CDCP1-201ENST00000296129 TSNAXIP1Q2TAA8 658 aa18.61■□□□□ 0.57
CDCP1-201ENST00000296129 POTEGQ6S5H5 508 aa18.61■□□□□ 0.57
CDCP1-201ENST00000296129 SHC4Q6S5L8 630 aa18.61■□□□□ 0.57
CDCP1-201ENST00000296129 POTEEQ6S8J3 1075 aa18.61■□□□□ 0.57
CDCP1-201ENST00000296129 CCNYQ8ND76 341 aa18.61■□□□□ 0.57
CDCP1-201ENST00000296129 KIF2CQ99661 725 aa18.61■□□□□ 0.57
CDCP1-201ENST00000296129 HOXC10Q9NYD6 342 aa18.61■□□□□ 0.57
CDCP1-201ENST00000296129 ZBTB7AO95365 584 aa18.6■□□□□ 0.57
CDCP1-201ENST00000296129 ACTN1P12814 892 aa18.6■□□□□ 0.57
CDCP1-201ENST00000296129 RC3H1Q5TC82 1133 aaKnown RBP18.6■□□□□ 0.57
CDCP1-201ENST00000296129 CALN1Q9BXU9 219 aa18.6■□□□□ 0.57
CDCP1-201ENST00000296129 CAPN7Q9Y6W3 813 aa18.6■□□□□ 0.57
CDCP1-201ENST00000296129 ADCY1Q08828 1119 aa18.6■□□□□ 0.57
CDCP1-201ENST00000296129 VCX3BQ9H321 246 aa18.6■□□□□ 0.57
CDCP1-201ENST00000296129 PNMA3Q9UL41 463 aa18.6■□□□□ 0.57
CDCP1-201ENST00000296129 WDR64B1ANS9 1081 aa18.6■□□□□ 0.57
CDCP1-201ENST00000296129 DARS2Q6PI48 645 aaKnown RBP18.6■□□□□ 0.57
CDCP1-201ENST00000296129 DHX40Q8IX18 779 aaKnown RBP18.6■□□□□ 0.57
CDCP1-201ENST00000296129 ZNF34Q8IZ26 560 aa18.6■□□□□ 0.57
CDCP1-201ENST00000296129 SRBD1Q8N5C6 995 aaKnown RBP18.6■□□□□ 0.57
CDCP1-201ENST00000296129 TCP11Q8WWU5 503 aa18.6■□□□□ 0.57
CDCP1-201ENST00000296129 RNASELQ05823 741 aaKnown RBP18.6■□□□□ 0.57
CDCP1-201ENST00000296129 C12orf60Q5U649 245 aa18.6■□□□□ 0.57
CDCP1-201ENST00000296129 CYP4F22Q6NT55 531 aa18.6■□□□□ 0.57
CDCP1-201ENST00000296129 PROM2Q8N271 834 aa18.6■□□□□ 0.57
CDCP1-201ENST00000296129 ECE1P42892 770 aa18.59■□□□□ 0.57
CDCP1-201ENST00000296129 ORC2Q13416 577 aaPredicted RBP18.59■□□□□ 0.57
CDCP1-201ENST00000296129 TBC1D22BQ9NU19 505 aa18.59■□□□□ 0.57
CDCP1-201ENST00000296129 LRFN2Q9ULH4 789 aa18.59■□□□□ 0.57
CDCP1-201ENST00000296129 PVALEFA0A1B0GWK0 134 aa18.59■□□□□ 0.57
CDCP1-201ENST00000296129 IFNAR2P48551 515 aa18.59■□□□□ 0.57
CDCP1-201ENST00000296129 NEDD1Q8NHV4 660 aa18.59■□□□□ 0.57
CDCP1-201ENST00000296129 FAM49AQ9H0Q0 323 aaPredicted RBP18.59■□□□□ 0.57
CDCP1-201ENST00000296129 LRRD1A4D1F6 860 aa18.59■□□□□ 0.57
CDCP1-201ENST00000296129 LRRC53A6NM62 1247 aa18.59■□□□□ 0.57
CDCP1-201ENST00000296129 SLC16A4O15374 487 aa18.59■□□□□ 0.57
CDCP1-201ENST00000296129 CAMTA2O94983 1202 aa18.59■□□□□ 0.57
CDCP1-201ENST00000296129 DHX9Q08211 1270 aaKnown RBP18.59■□□□□ 0.57
CDCP1-201ENST00000296129 RPS6KA2Q15349 733 aa18.59■□□□□ 0.57
CDCP1-201ENST00000296129 SPZ1Q9BXG8 430 aa18.59■□□□□ 0.57
CDCP1-201ENST00000296129 PPP1R12CQ9BZL4 782 aa18.59■□□□□ 0.57
CDCP1-201ENST00000296129 RNF146Q9NTX7 359 aa18.59■□□□□ 0.57
CDCP1-201ENST00000296129 FOXN1O15353 648 aa18.59■□□□□ 0.57
CDCP1-201ENST00000296129 ATP8B1O43520 1251 aa18.59■□□□□ 0.57
CDCP1-201ENST00000296129 THNSL1Q8IYQ7 743 aa18.59■□□□□ 0.57
CDCP1-201ENST00000296129 RAB3IPQ96QF0 476 aaPredicted RBP18.59■□□□□ 0.57
CDCP1-201ENST00000296129 EFCC1Q9HA90 598 aa18.59■□□□□ 0.57
CDCP1-201ENST00000296129 INTS9Q9NV88 658 aaKnown RBP18.59■□□□□ 0.57
CDCP1-201ENST00000296129 ARL4AP40617 200 aa18.58■□□□□ 0.57
CDCP1-201ENST00000296129 BASP1P80723 227 aaKnown RBP18.58■□□□□ 0.57
CDCP1-201ENST00000296129 TMED2Q15363 201 aa18.58■□□□□ 0.57
CDCP1-201ENST00000296129 LDHAP00338 332 aaKnown RBP18.58■□□□□ 0.57
CDCP1-201ENST00000296129 DR1Q01658 176 aa18.58■□□□□ 0.57
CDCP1-201ENST00000296129 LINC00116Q8NCU8 138 aa18.58■□□□□ 0.57
CDCP1-201ENST00000296129 TBC1D16Q8TBP0 767 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms