RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 NELFCDQ8IXH7 590 aa12.88□□□□□ -0.35
SYNGAP1-201ENST00000293748 U2AF1L4Q8WU68 220 aaKnown RBP12.88□□□□□ -0.35
SYNGAP1-201ENST00000293748 EPSTI1Q96J88 318 aa12.88□□□□□ -0.35
SYNGAP1-201ENST00000293748 GSDMAQ96QA5 445 aa12.88□□□□□ -0.35
SYNGAP1-201ENST00000293748 KIAA1683Q9H0B3 1180 aa12.88□□□□□ -0.35
SYNGAP1-201ENST00000293748 RIC8AQ9NPQ8 531 aa12.88□□□□□ -0.35
SYNGAP1-201ENST00000293748 PDHXO00330 501 aa12.88□□□□□ -0.35
SYNGAP1-201ENST00000293748 XRCC5P13010 732 aaKnown RBP12.88□□□□□ -0.35
SYNGAP1-201ENST00000293748 GUCY2DQ02846 1103 aa12.88□□□□□ -0.35
SYNGAP1-201ENST00000293748 RASIP1Q5U651 963 aa12.88□□□□□ -0.35
SYNGAP1-201ENST00000293748 TATDN1Q6P1N9 297 aa12.88□□□□□ -0.35
SYNGAP1-201ENST00000293748 ZNF654Q8IZM8 581 aa12.88□□□□□ -0.35
SYNGAP1-201ENST00000293748 VCPKMTQ9H867 229 aa12.88□□□□□ -0.35
SYNGAP1-201ENST00000293748 PCDHA5Q9Y5H7 936 aa12.88□□□□□ -0.35
SYNGAP1-201ENST00000293748 SEC31AO94979 1220 aaKnown RBP12.88□□□□□ -0.35
SYNGAP1-201ENST00000293748 PHBP35232 272 aa12.88□□□□□ -0.35
SYNGAP1-201ENST00000293748 IFT88Q13099 833 aa12.88□□□□□ -0.35
SYNGAP1-201ENST00000293748 REXO1Q8N1G1 1221 aaKnown RBP12.88□□□□□ -0.35
SYNGAP1-201ENST00000293748 MB21D1Q8N884 522 aa12.88□□□□□ -0.35
SYNGAP1-201ENST00000293748 RNF14Q9UBS8 474 aa12.88□□□□□ -0.35
SYNGAP1-201ENST00000293748 BMP3P12645 472 aa12.88□□□□□ -0.35
SYNGAP1-201ENST00000293748 CLCN6P51797 869 aa12.88□□□□□ -0.35
SYNGAP1-201ENST00000293748 COPB1P53618 953 aaKnown RBP12.88□□□□□ -0.35
SYNGAP1-201ENST00000293748 SYNPO2Q9UMS6 1093 aa12.88□□□□□ -0.35
SYNGAP1-201ENST00000293748 MYH2Q9UKX2 1941 aa12.87□□□□□ -0.35
SYNGAP1-201ENST00000293748 CRCPO75575 148 aa12.87□□□□□ -0.35
SYNGAP1-201ENST00000293748 RASA1P20936 1047 aa12.87□□□□□ -0.35
SYNGAP1-201ENST00000293748 PEX19P40855 299 aa12.87□□□□□ -0.35
SYNGAP1-201ENST00000293748 SLC39A14Q15043 492 aa12.87□□□□□ -0.35
SYNGAP1-201ENST00000293748 TERF2Q15554 542 aa12.87□□□□□ -0.35
SYNGAP1-201ENST00000293748 HSP90AA5PQ58FG0 334 aa12.87□□□□□ -0.35
SYNGAP1-201ENST00000293748 GPATCH4Q5T3I0 446 aaKnown RBP12.87□□□□□ -0.35
SYNGAP1-201ENST00000293748 CDAN1Q8IWY9 1227 aa12.87□□□□□ -0.35
SYNGAP1-201ENST00000293748 RETREG2Q8NC44 543 aa12.87□□□□□ -0.35
SYNGAP1-201ENST00000293748 BBOF1Q8ND07 529 aa12.87□□□□□ -0.35
SYNGAP1-201ENST00000293748 MAP4K1Q92918 833 aa12.87□□□□□ -0.35
SYNGAP1-201ENST00000293748 ZSCAN10Q96SZ4 725 aaPredicted RBP12.87□□□□□ -0.35
SYNGAP1-201ENST00000293748 ACTR5Q9H9F9 607 aaPredicted RBP12.87□□□□□ -0.35
SYNGAP1-201ENST00000293748 GPCPD1Q9NPB8 672 aa12.87□□□□□ -0.35
SYNGAP1-201ENST00000293748 SAGE1Q9NXZ1 904 aa12.87□□□□□ -0.35
SYNGAP1-201ENST00000293748 KDM3AQ9Y4C1 1321 aa12.87□□□□□ -0.35
SYNGAP1-201ENST00000293748 GIPC1O14908 333 aa12.87□□□□□ -0.35
SYNGAP1-201ENST00000293748 SLC8A3P57103 927 aa12.87□□□□□ -0.35
SYNGAP1-201ENST00000293748 DGKHQ86XP1 1220 aa12.87□□□□□ -0.35
SYNGAP1-201ENST00000293748 CCDC13Q8IYE1 715 aa12.87□□□□□ -0.35
SYNGAP1-201ENST00000293748 LRRC47Q8N1G4 583 aaKnown RBP12.87□□□□□ -0.35
SYNGAP1-201ENST00000293748 TTC16Q8NEE8 873 aa12.87□□□□□ -0.35
SYNGAP1-201ENST00000293748 INTS9Q9NV88 658 aaKnown RBP12.87□□□□□ -0.35
SYNGAP1-201ENST00000293748 FCGRTP55899 365 aa12.87□□□□□ -0.35
SYNGAP1-201ENST00000293748 IFNL1Q8IU54 200 aa12.87□□□□□ -0.35
SYNGAP1-201ENST00000293748 CCDC89Q8N998 374 aa12.87□□□□□ -0.35
SYNGAP1-201ENST00000293748 DCAF4Q8WV16 495 aa12.87□□□□□ -0.35
SYNGAP1-201ENST00000293748 ARMCX3Q9UH62 379 aaPredicted RBP12.87□□□□□ -0.35
SYNGAP1-201ENST00000293748 HSPA1AP0DMV8 641 aaKnown RBP12.86□□□□□ -0.35
SYNGAP1-201ENST00000293748 HSPA1BP0DMV9 641 aaKnown RBP12.86□□□□□ -0.35
SYNGAP1-201ENST00000293748 COG2Q14746 738 aa12.86□□□□□ -0.35
SYNGAP1-201ENST00000293748 NCAPH2Q6IBW4 605 aa12.86□□□□□ -0.35
SYNGAP1-201ENST00000293748 RCSD1Q6JBY9 416 aa12.86□□□□□ -0.35
SYNGAP1-201ENST00000293748 DPH5Q9H2P9 285 aa12.86□□□□□ -0.35
SYNGAP1-201ENST00000293748 RPAP3Q9H6T3 665 aaPredicted RBP12.86□□□□□ -0.35
SYNGAP1-201ENST00000293748 FEM1BQ9UK73 627 aa12.86□□□□□ -0.35
SYNGAP1-201ENST00000293748 OPHN1O60890 802 aa12.86□□□□□ -0.35
SYNGAP1-201ENST00000293748 GCNT3O95395 438 aa12.86□□□□□ -0.35
SYNGAP1-201ENST00000293748 CASP14P31944 242 aa12.86□□□□□ -0.35
SYNGAP1-201ENST00000293748 RNASELQ05823 741 aaKnown RBP12.86□□□□□ -0.35
SYNGAP1-201ENST00000293748 TRIM4Q9C037 500 aa12.86□□□□□ -0.35
SYNGAP1-201ENST00000293748 PLEKHA4Q9H4M7 779 aa12.86□□□□□ -0.35
SYNGAP1-201ENST00000293748 MAGEF1Q9HAY2 307 aa12.86□□□□□ -0.35
SYNGAP1-201ENST00000293748 POLR3EQ9NVU0 708 aa12.86□□□□□ -0.35
SYNGAP1-201ENST00000293748 RCOR1Q9UKL0 485 aa12.86□□□□□ -0.35
SYNGAP1-201ENST00000293748 KCNH4Q9UQ05 1017 aa12.86□□□□□ -0.35
SYNGAP1-201ENST00000293748 USTQ9Y2C2 406 aa12.86□□□□□ -0.35
SYNGAP1-201ENST00000293748 SLC45A1Q9Y2W3 748 aa12.86□□□□□ -0.35
SYNGAP1-201ENST00000293748 PPP6R2O75170 966 aa12.86□□□□□ -0.35
SYNGAP1-201ENST00000293748 MYCT1Q8N699 235 aa12.86□□□□□ -0.35
SYNGAP1-201ENST00000293748 IWS1Q96ST2 819 aa12.86□□□□□ -0.35
SYNGAP1-201ENST00000293748 PARD6BQ9BYG5 372 aa12.86□□□□□ -0.35
SYNGAP1-201ENST00000293748 LSG1Q9H089 658 aaKnown RBP12.86□□□□□ -0.35
SYNGAP1-201ENST00000293748 MRPL44Q9H9J2 332 aaKnown RBP12.86□□□□□ -0.35
SYNGAP1-201ENST00000293748 ARHGAP42A6NI28 874 aa12.86□□□□□ -0.35
SYNGAP1-201ENST00000293748 PNMA6AP0CW24 399 aaPredicted RBP12.86□□□□□ -0.35
SYNGAP1-201ENST00000293748 EEF1GP26641 437 aaKnown RBP12.86□□□□□ -0.35
SYNGAP1-201ENST00000293748 GPIHBP1Q8IV16 184 aa12.86□□□□□ -0.35
SYNGAP1-201ENST00000293748 CFAP61Q8NHU2 1237 aa12.86□□□□□ -0.35
SYNGAP1-201ENST00000293748 METTL14Q9HCE5 456 aaKnown RBP12.86□□□□□ -0.35
SYNGAP1-201ENST00000293748 MAST2Q6P0Q8 1798 aa12.86□□□□□ -0.35
SYNGAP1-201ENST00000293748 TNPO2O14787 897 aaKnown RBP12.85□□□□□ -0.35
SYNGAP1-201ENST00000293748 MAP3K10Q02779 954 aa12.85□□□□□ -0.35
SYNGAP1-201ENST00000293748 KCTD16Q68DU8 428 aa12.85□□□□□ -0.35
SYNGAP1-201ENST00000293748 SPICE1Q8N0Z3 855 aa12.85□□□□□ -0.35
SYNGAP1-201ENST00000293748 CHAMP1Q96JM3 812 aa12.85□□□□□ -0.35
SYNGAP1-201ENST00000293748 MTA3Q9BTC8 594 aa12.85□□□□□ -0.35
SYNGAP1-201ENST00000293748 MTMR4Q9NYA4 1195 aa12.85□□□□□ -0.35
SYNGAP1-201ENST00000293748 TMX2Q9Y320 296 aa12.85□□□□□ -0.35
SYNGAP1-201ENST00000293748 THAP12O43422 761 aa12.85□□□□□ -0.35
SYNGAP1-201ENST00000293748 SP3Q02447 781 aa12.85□□□□□ -0.35
SYNGAP1-201ENST00000293748 PPP4R1Q8TF05 950 aa12.85□□□□□ -0.35
SYNGAP1-201ENST00000293748 CEP95Q96GE4 821 aa12.85□□□□□ -0.35
SYNGAP1-201ENST00000293748 PFDN4Q9NQP4 134 aa12.85□□□□□ -0.35
SYNGAP1-201ENST00000293748 TBC1D7Q9P0N9 293 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms