RNA–Protein interactions for RNA: ENST00000287936.8

HMGCR-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCR, Length 4,585 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-201ENST00000287936 HINFPQ9BQA5 517 aa10.96□□□□□ -0.65
HMGCR-201ENST00000287936 PKD2L1Q9P0L9 805 aa10.96□□□□□ -0.65
HMGCR-201ENST00000287936 DAAM1Q9Y4D1 1078 aa10.96□□□□□ -0.65
HMGCR-201ENST00000287936 TCP10L2B9ZVM9 353 aa10.96□□□□□ -0.66
HMGCR-201ENST00000287936 PJA2O43164 708 aa10.96□□□□□ -0.66
HMGCR-201ENST00000287936 APBA3O96018 575 aa10.96□□□□□ -0.66
HMGCR-201ENST00000287936 PRELPP51888 382 aa10.96□□□□□ -0.66
HMGCR-201ENST00000287936 SNAP25P60880 206 aa10.96□□□□□ -0.66
HMGCR-201ENST00000287936 TTC31Q49AM3 519 aaPredicted RBP10.96□□□□□ -0.66
HMGCR-201ENST00000287936 SPATS2Q86XZ4 545 aaKnown RBP10.96□□□□□ -0.66
HMGCR-201ENST00000287936 PPM1EQ8WY54 764 aa10.96□□□□□ -0.66
HMGCR-201ENST00000287936 KIFAP3Q92845 792 aa10.96□□□□□ -0.66
HMGCR-201ENST00000287936 EIF2AK1Q9BQI3 630 aaKnown RBP10.96□□□□□ -0.66
HMGCR-201ENST00000287936 PNMA2Q9UL42 364 aa10.96□□□□□ -0.66
HMGCR-201ENST00000287936 CAPN6Q9Y6Q1 641 aa10.96□□□□□ -0.66
HMGCR-201ENST00000287936 GOLGA6L7A0A1B0GV03 622 aa10.96□□□□□ -0.66
HMGCR-201ENST00000287936 TMEM110-MUSTN1A8MSY1 372 aa10.96□□□□□ -0.66
HMGCR-201ENST00000287936 DDX39AO00148 427 aaKnown RBP10.96□□□□□ -0.66
HMGCR-201ENST00000287936 ADAMTS3O15072 1205 aa10.96□□□□□ -0.66
HMGCR-201ENST00000287936 DKC1O60832 514 aaKnown RBP eCLIP10.96□□□□□ -0.666e-6■■■□□ 15
HMGCR-201ENST00000287936 ENTPD3O75355 529 aa10.96□□□□□ -0.66
HMGCR-201ENST00000287936 CTTNQ14247 550 aaKnown RBP10.96□□□□□ -0.66
HMGCR-201ENST00000287936 CEP85LQ5SZL2 805 aa10.96□□□□□ -0.66
HMGCR-201ENST00000287936 PTF1AQ7RTS3 328 aa10.96□□□□□ -0.66
HMGCR-201ENST00000287936 SYT2Q8N9I0 419 aaPredicted RBP10.96□□□□□ -0.66
HMGCR-201ENST00000287936 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.96□□□□□ -0.669e-10■■■■■ 79.8
HMGCR-201ENST00000287936 FAM114A2Q9NRY5 505 aa10.96□□□□□ -0.66
HMGCR-201ENST00000287936 DUSP10Q9Y6W6 482 aa10.96□□□□□ -0.66
HMGCR-201ENST00000287936 GFPT2O94808 682 aa10.95□□□□□ -0.66
HMGCR-201ENST00000287936 NDUFB10O96000 172 aa10.95□□□□□ -0.66
HMGCR-201ENST00000287936 SNHG28P0DPA3 235 aa10.95□□□□□ -0.66
HMGCR-201ENST00000287936 TEX2Q8IWB9 1127 aa10.95□□□□□ -0.66
HMGCR-201ENST00000287936 SLC17A8Q8NDX2 589 aa10.95□□□□□ -0.66
HMGCR-201ENST00000287936 NEK9Q8TD19 979 aa10.95□□□□□ -0.66
HMGCR-201ENST00000287936 ZDHHC15Q96MV8 337 aa10.95□□□□□ -0.66
HMGCR-201ENST00000287936 REEP2Q9BRK0 252 aa10.95□□□□□ -0.66
HMGCR-201ENST00000287936 TMEM206Q9H813 350 aa10.95□□□□□ -0.66
HMGCR-201ENST00000287936 MYO5AQ9Y4I1 1855 aaKnown RBP10.95□□□□□ -0.66
HMGCR-201ENST00000287936 HOOK3Q86VS8 718 aa10.95□□□□□ -0.66
HMGCR-201ENST00000287936 TRIM59Q8IWR1 403 aa10.95□□□□□ -0.66
HMGCR-201ENST00000287936 OTUD6BQ8N6M0 293 aa10.95□□□□□ -0.66
HMGCR-201ENST00000287936 BBXQ8WY36 941 aaPredicted RBP10.95□□□□□ -0.66
HMGCR-201ENST00000287936 BICD1Q96G01 975 aa10.95□□□□□ -0.66
HMGCR-201ENST00000287936 HERC5Q9UII4 1024 aaKnown RBP10.95□□□□□ -0.66
HMGCR-201ENST00000287936 ZBTB21Q9ULJ3 1066 aa10.95□□□□□ -0.66
HMGCR-201ENST00000287936 DIS3Q9Y2L1 958 aaKnown RBP10.95□□□□□ -0.66
HMGCR-201ENST00000287936 LRRC55Q6ZSA7 311 aa10.95□□□□□ -0.66
HMGCR-201ENST00000287936 LARGE2Q8N3Y3 721 aa10.95□□□□□ -0.66
HMGCR-201ENST00000287936 BCAS4Q8TDM0 211 aa10.95□□□□□ -0.66
HMGCR-201ENST00000287936 NUDT12Q9BQG2 462 aa10.95□□□□□ -0.66
HMGCR-201ENST00000287936 POLR3CQ9BUI4 534 aaPredicted RBP10.95□□□□□ -0.66
HMGCR-201ENST00000287936 TTYH3Q9C0H2 523 aa10.95□□□□□ -0.66
HMGCR-201ENST00000287936 NFU1Q9UMS0 254 aa10.95□□□□□ -0.66
HMGCR-201ENST00000287936 LRRIQ3A6PVS8 624 aaPredicted RBP10.94□□□□□ -0.66
HMGCR-201ENST00000287936 ABCB4P21439 1286 aa10.94□□□□□ -0.66
HMGCR-201ENST00000287936 CTNNA1P35221 906 aaKnown RBP10.94□□□□□ -0.66
HMGCR-201ENST00000287936 Q4G0T1 1027 aa10.94□□□□□ -0.66
HMGCR-201ENST00000287936 MSL1Q68DK7 614 aa10.94□□□□□ -0.66
HMGCR-201ENST00000287936 PLEKHA4Q9H4M7 779 aa10.94□□□□□ -0.66
HMGCR-201ENST00000287936 DDX4Q9NQI0 724 aaKnown RBP10.94□□□□□ -0.66
HMGCR-201ENST00000287936 UCHL3P15374 230 aa10.94□□□□□ -0.66
HMGCR-201ENST00000287936 CATSPER3Q86XQ3 398 aa10.94□□□□□ -0.66
HMGCR-201ENST00000287936 MICALL1Q8N3F8 863 aa10.94□□□□□ -0.66
HMGCR-201ENST00000287936 CALR3Q96L12 384 aaKnown RBP10.94□□□□□ -0.66
HMGCR-201ENST00000287936 SNED1Q8TER0 1413 aa10.94□□□□□ -0.66
HMGCR-201ENST00000287936 UBE4BO95155 1302 aa10.94□□□□□ -0.66
HMGCR-201ENST00000287936 POLRMTO00411 1230 aaKnown RBP10.94□□□□□ -0.66
HMGCR-201ENST00000287936 EIF3DO15371 548 aaKnown RBP eCLIP10.94□□□□□ -0.66
HMGCR-201ENST00000287936 SPOPO43791 374 aa10.94□□□□□ -0.66
HMGCR-201ENST00000287936 MED24O75448 989 aa10.94□□□□□ -0.66
HMGCR-201ENST00000287936 GABPAQ06546 454 aa10.94□□□□□ -0.66
HMGCR-201ENST00000287936 TRMT1LQ7Z2T5 733 aaKnown RBP10.94□□□□□ -0.66
HMGCR-201ENST00000287936 DYDC2Q96IM9 177 aa10.94□□□□□ -0.66
HMGCR-201ENST00000287936 ACCSQ96QU6 501 aa10.94□□□□□ -0.66
HMGCR-201ENST00000287936 TDRD3Q9H7E2 651 aaKnown RBP10.94□□□□□ -0.66
HMGCR-201ENST00000287936 PLCB1Q9NQ66 1216 aa10.94□□□□□ -0.66
HMGCR-201ENST00000287936 PARP2Q9UGN5 583 aa10.94□□□□□ -0.66
HMGCR-201ENST00000287936 ABL1P00519 1130 aa10.94□□□□□ -0.66
HMGCR-201ENST00000287936 RFX1P22670 979 aa10.94□□□□□ -0.66
HMGCR-201ENST00000287936 HPDP32754 393 aaPredicted RBP10.94□□□□□ -0.66
HMGCR-201ENST00000287936 SREBF1P36956 1147 aa10.94□□□□□ -0.66
HMGCR-201ENST00000287936 MAEAQ7L5Y9 396 aa10.94□□□□□ -0.66
HMGCR-201ENST00000287936 KCNK18Q7Z418 384 aa10.94□□□□□ -0.66
HMGCR-201ENST00000287936 RDH13Q8NBN7 331 aa10.94□□□□□ -0.66
HMGCR-201ENST00000287936 SCFD1Q8WVM8 642 aa10.94□□□□□ -0.66
HMGCR-201ENST00000287936 SERPINA10Q9UK55 444 aa10.94□□□□□ -0.66
HMGCR-201ENST00000287936 CCPG1Q9ULG6 757 aa10.94□□□□□ -0.66
HMGCR-201ENST00000287936 XIRP1Q702N8 1843 aaKnown RBP10.93□□□□□ -0.66
HMGCR-201ENST00000287936 BCORQ6W2J9 1755 aa10.93□□□□□ -0.66
HMGCR-201ENST00000287936 TFRCP02786 760 aaKnown RBP10.93□□□□□ -0.66
HMGCR-201ENST00000287936 GBP1P32455 592 aa10.93□□□□□ -0.66
HMGCR-201ENST00000287936 SLC35G1Q2M3R5 365 aa10.93□□□□□ -0.66
HMGCR-201ENST00000287936 HYIQ5T013 277 aa10.93□□□□□ -0.66
HMGCR-201ENST00000287936 GMCL1P1Q8NEA9 526 aa10.93□□□□□ -0.66
HMGCR-201ENST00000287936 PIGOQ8TEQ8 1089 aa10.93□□□□□ -0.66
HMGCR-201ENST00000287936 GMCL1Q96IK5 515 aa10.93□□□□□ -0.66
HMGCR-201ENST00000287936 DNAJC12Q9UKB3 198 aa10.93□□□□□ -0.66
HMGCR-201ENST00000287936 CACNA1SQ13698 1873 aa10.93□□□□□ -0.66
HMGCR-201ENST00000287936 CCDC88AQ3V6T2 1871 aa10.93□□□□□ -0.66
HMGCR-201ENST00000287936 CCDC169A6NNP5 214 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms