RNA–Protein interactions for RNA: ENST00000286428.5

VBP1-201, Transcript of VHL binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VBP1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-201ENST00000286428 PPP2R3AQ06190 1150 aa20.94■□□□□ 0.94
VBP1-201ENST00000286428 ALCAMQ13740 583 aa20.94■□□□□ 0.94
VBP1-201ENST00000286428 CCDC40Q4G0X9 1142 aa20.94■□□□□ 0.94
VBP1-201ENST00000286428 E4F1Q66K89 784 aaPredicted RBP20.94■□□□□ 0.94
VBP1-201ENST00000286428 LRRC55Q6ZSA7 311 aa20.94■□□□□ 0.94
VBP1-201ENST00000286428 EPM2AIP1Q7L775 607 aaPredicted RBP20.94■□□□□ 0.94
VBP1-201ENST00000286428 OTUD6AQ7L8S5 288 aa20.94■□□□□ 0.94
VBP1-201ENST00000286428 BANK1Q8NDB2 785 aa20.94■□□□□ 0.94
VBP1-201ENST00000286428 CPLX3Q8WVH0 158 aa20.94■□□□□ 0.94
VBP1-201ENST00000286428 SPATC1LQ9H0A9 340 aa20.94■□□□□ 0.94
VBP1-201ENST00000286428 KCTD10Q9H3F6 313 aa20.94■□□□□ 0.94
VBP1-201ENST00000286428 NDST4Q9H3R1 872 aa20.94■□□□□ 0.94
VBP1-201ENST00000286428 ANKEF1Q9NU02 776 aa20.94■□□□□ 0.94
VBP1-201ENST00000286428 LARSQ9P2J5 1176 aaKnown RBP20.94■□□□□ 0.94
VBP1-201ENST00000286428 PCDHB13Q9Y5F0 798 aa20.94■□□□□ 0.94
VBP1-201ENST00000286428 PCDHA10Q9Y5I2 948 aa20.94■□□□□ 0.94
VBP1-201ENST00000286428 EIF3JO75822 258 aaKnown RBP20.93■□□□□ 0.94
VBP1-201ENST00000286428 GCNT3O95395 438 aa20.93■□□□□ 0.94
VBP1-201ENST00000286428 MAPTP10636 758 aaKnown RBP20.93■□□□□ 0.94
VBP1-201ENST00000286428 ZNF131P52739 623 aa20.93■□□□□ 0.94
VBP1-201ENST00000286428 ADAM9Q13443 819 aa20.93■□□□□ 0.94
VBP1-201ENST00000286428 MOV10L1Q9BXT6 1211 aaKnown RBP20.93■□□□□ 0.94
VBP1-201ENST00000286428 TYW1Q9NV66 732 aaKnown RBP20.93■□□□□ 0.94
VBP1-201ENST00000286428 POLR2AP24928 1970 aaKnown RBP20.93■□□□□ 0.94
VBP1-201ENST00000286428 TRIM21P19474 475 aaKnown RBP20.93■□□□□ 0.94
VBP1-201ENST00000286428 PTPN21Q16825 1174 aa20.93■□□□□ 0.94
VBP1-201ENST00000286428 TMEM139Q8IV31 216 aa20.93■□□□□ 0.94
VBP1-201ENST00000286428 NELFCDQ8IXH7 590 aa20.93■□□□□ 0.94
VBP1-201ENST00000286428 FAM178BQ8IXR5 827 aa20.93■□□□□ 0.94
VBP1-201ENST00000286428 ZC3H3Q8IXZ2 948 aaKnown RBP20.93■□□□□ 0.94
VBP1-201ENST00000286428 OR8K1Q8NGG5 319 aa20.93■□□□□ 0.94
VBP1-201ENST00000286428 ATP6V0A1Q93050 837 aa20.93■□□□□ 0.94
VBP1-201ENST00000286428 OPTNQ96CV9 577 aa20.93■□□□□ 0.94
VBP1-201ENST00000286428 C16orf45Q96MC5 204 aaPredicted RBP20.93■□□□□ 0.94
VBP1-201ENST00000286428 PCMTD1Q96MG8 357 aaPredicted RBP20.93■□□□□ 0.94
VBP1-201ENST00000286428 ZNHIT6Q9NWK9 470 aaKnown RBP20.93■□□□□ 0.94
VBP1-201ENST00000286428 TRMT1Q9NXH9 659 aaKnown RBP20.93■□□□□ 0.94
VBP1-201ENST00000286428 PNMA3Q9UL41 463 aa20.93■□□□□ 0.94
VBP1-201ENST00000286428 CAPN11Q9UMQ6 739 aa20.93■□□□□ 0.94
VBP1-201ENST00000286428 CLEC11AQ9Y240 323 aa20.93■□□□□ 0.94
VBP1-201ENST00000286428 RLFQ13129 1914 aa20.92■□□□□ 0.94
VBP1-201ENST00000286428 A0A1W2PQJ5 194 aa20.92■□□□□ 0.94
VBP1-201ENST00000286428 PSAPP07602 524 aa20.92■□□□□ 0.94
VBP1-201ENST00000286428 YWHABP31946 246 aaKnown RBP20.92■□□□□ 0.94
VBP1-201ENST00000286428 KRT9P35527 623 aa20.92■□□□□ 0.94
VBP1-201ENST00000286428 HERVK_113P62684 666 aa20.92■□□□□ 0.94
VBP1-201ENST00000286428 SNAPC2Q13487 334 aa20.92■□□□□ 0.94
VBP1-201ENST00000286428 MIIPQ5JXC2 388 aa20.92■□□□□ 0.94
VBP1-201ENST00000286428 LDLRAD1Q5T700 205 aa20.92■□□□□ 0.94
VBP1-201ENST00000286428 PADI6Q6TGC4 694 aa20.92■□□□□ 0.94
VBP1-201ENST00000286428 DLK2Q6UY11 383 aa20.92■□□□□ 0.94
VBP1-201ENST00000286428 CYP26C1Q6V0L0 522 aa20.92■□□□□ 0.94
VBP1-201ENST00000286428 GOLGA5Q8TBA6 731 aa20.92■□□□□ 0.94
VBP1-201ENST00000286428 CNKSR2Q8WXI2 1034 aa20.92■□□□□ 0.94
VBP1-201ENST00000286428 SLC10A4Q96EP9 437 aa20.92■□□□□ 0.94
VBP1-201ENST00000286428 ASCC2Q9H1I8 757 aaPredicted RBP20.92■□□□□ 0.94
VBP1-201ENST00000286428 METTL14Q9HCE5 456 aaKnown RBP20.92■□□□□ 0.94
VBP1-201ENST00000286428 ABHD10Q9NUJ1 306 aa20.92■□□□□ 0.94
VBP1-201ENST00000286428 SCN4AP35499 1836 aa20.92■□□□□ 0.94
VBP1-201ENST00000286428 SPATA31C2B4DYI2 1134 aa20.91■□□□□ 0.94
VBP1-201ENST00000286428 FECHP22830 423 aa20.91■□□□□ 0.94
VBP1-201ENST00000286428 ICAM3P32942 547 aa20.91■□□□□ 0.94
VBP1-201ENST00000286428 FKBP1BP68106 108 aa20.91■□□□□ 0.94
VBP1-201ENST00000286428 NFIL3Q16649 462 aa20.91■□□□□ 0.94
VBP1-201ENST00000286428 CEP135Q66GS9 1140 aa20.91■□□□□ 0.94
VBP1-201ENST00000286428 NYAP1Q6ZVC0 841 aa20.91■□□□□ 0.94
VBP1-201ENST00000286428 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.91■□□□□ 0.94
VBP1-201ENST00000286428 GLIS3Q8NEA6 775 aa20.91■□□□□ 0.94
VBP1-201ENST00000286428 POTEB2H3BUK9 544 aa20.9■□□□□ 0.94
VBP1-201ENST00000286428 ATP9AO75110 1047 aa20.9■□□□□ 0.94
VBP1-201ENST00000286428 RARRES1P49788 294 aa20.9■□□□□ 0.94
VBP1-201ENST00000286428 ODR4Q5SWX8 454 aa20.9■□□□□ 0.94
VBP1-201ENST00000286428 FRMD5Q7Z6J6 570 aa20.9■□□□□ 0.94
VBP1-201ENST00000286428 NCAPG2Q86XI2 1143 aa20.9■□□□□ 0.94
VBP1-201ENST00000286428 CLMNQ96JQ2 1002 aa20.9■□□□□ 0.94
VBP1-201ENST00000286428 PPP1R13BQ96KQ4 1090 aa20.9■□□□□ 0.94
VBP1-201ENST00000286428 DRC1Q96MC2 740 aa20.9■□□□□ 0.94
VBP1-201ENST00000286428 JPH1Q9HDC5 661 aaPredicted RBP20.9■□□□□ 0.94
VBP1-201ENST00000286428 BTBD7Q9P203 1132 aa20.9■□□□□ 0.94
VBP1-201ENST00000286428 WRAP73Q9P2S5 460 aaPredicted RBP20.9■□□□□ 0.94
VBP1-201ENST00000286428 KCNG1Q9UIX4 513 aa20.9■□□□□ 0.94
VBP1-201ENST00000286428 CCDC175P0C221 793 aa20.89■□□□□ 0.94
VBP1-201ENST00000286428 NR2F2P24468 414 aa20.89■□□□□ 0.94
VBP1-201ENST00000286428 FXR1P51114 621 aaKnown RBP eCLIP20.89■□□□□ 0.94
VBP1-201ENST00000286428 SYCP1Q15431 976 aa20.89■□□□□ 0.94
VBP1-201ENST00000286428 HS2ST1Q7LGA3 356 aa20.89■□□□□ 0.94
VBP1-201ENST00000286428 ZNF720Q7Z2F6 126 aa20.89■□□□□ 0.94
VBP1-201ENST00000286428 KIF18AQ8NI77 898 aa20.89■□□□□ 0.94
VBP1-201ENST00000286428 EEF2KMTQ96G04 330 aa20.89■□□□□ 0.94
VBP1-201ENST00000286428 PURBQ96QR8 312 aaKnown RBP20.89■□□□□ 0.94
VBP1-201ENST00000286428 EDEM3Q9BZQ6 932 aa20.89■□□□□ 0.94
VBP1-201ENST00000286428 SLC9A2Q9UBY0 812 aa20.89■□□□□ 0.94
VBP1-201ENST00000286428 RSPH10B2B2RC85 870 aa20.89■□□□□ 0.93
VBP1-201ENST00000286428 SLC16A3O15427 465 aaKnown RBP20.89■□□□□ 0.93
VBP1-201ENST00000286428 RSPH10BP0C881 870 aa20.89■□□□□ 0.93
VBP1-201ENST00000286428 KCNA2P16389 499 aa20.89■□□□□ 0.93
VBP1-201ENST00000286428 GOLGA8FQ08AF8 430 aa20.89■□□□□ 0.93
VBP1-201ENST00000286428 GOLGA8DPQ0D2H9 430 aa20.89■□□□□ 0.93
VBP1-201ENST00000286428 MIS18BP1Q6P0N0 1132 aa20.89■□□□□ 0.93
VBP1-201ENST00000286428 TMEM206Q9H813 350 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 316.6 ms