RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 DPF2Q92785 391 aa17.71■□□□□ 0.42
SH3RF1-201ENST00000284637 MAPK13O15264 365 aa17.7■□□□□ 0.42
SH3RF1-201ENST00000284637 CD58P19256 250 aa17.7■□□□□ 0.42
SH3RF1-201ENST00000284637 PPP2R2AP63151 447 aa17.7■□□□□ 0.42
SH3RF1-201ENST00000284637 CTTNQ14247 550 aaKnown RBP17.7■□□□□ 0.42
SH3RF1-201ENST00000284637 TTLL11Q8NHH1 800 aa17.7■□□□□ 0.42
SH3RF1-201ENST00000284637 HNRNPLLQ8WVV9 542 aaKnown RBP17.7■□□□□ 0.42
SH3RF1-201ENST00000284637 CCDC68Q9H2F9 335 aa17.7■□□□□ 0.42
SH3RF1-201ENST00000284637 CPVLQ9H3G5 476 aa17.7■□□□□ 0.42
SH3RF1-201ENST00000284637 NXF1Q9UBU9 619 aaKnown RBP17.7■□□□□ 0.42
SH3RF1-201ENST00000284637 FIS1Q9Y3D6 152 aa17.7■□□□□ 0.42
SH3RF1-201ENST00000284637 PRR36Q9H6K5 1346 aa17.7■□□□□ 0.42
SH3RF1-201ENST00000284637 M0QZ92 97 aa17.7■□□□□ 0.42
SH3RF1-201ENST00000284637 ATP6V0A1Q93050 837 aa17.7■□□□□ 0.42
SH3RF1-201ENST00000284637 SDCCAG3Q96C92 435 aa17.7■□□□□ 0.42
SH3RF1-201ENST00000284637 ZNF277Q9NRM2 450 aaPredicted RBP17.7■□□□□ 0.42
SH3RF1-201ENST00000284637 GINM1Q9NU53 330 aa17.7■□□□□ 0.42
SH3RF1-201ENST00000284637 H7C1W4 665 aa17.7■□□□□ 0.42
SH3RF1-201ENST00000284637 hCG_1984214I3L0E3 225 aa17.7■□□□□ 0.42
SH3RF1-201ENST00000284637 TTC4O95801 387 aa17.7■□□□□ 0.42
SH3RF1-201ENST00000284637 PDE6BP35913 854 aa17.7■□□□□ 0.42
SH3RF1-201ENST00000284637 UNC13DQ70J99 1090 aa17.7■□□□□ 0.42
SH3RF1-201ENST00000284637 ZNF713Q8N859 430 aaPredicted RBP17.7■□□□□ 0.42
SH3RF1-201ENST00000284637 PIP4K2CQ8TBX8 421 aa17.7■□□□□ 0.42
SH3RF1-201ENST00000284637 SLC7A3Q8WY07 619 aa17.7■□□□□ 0.42
SH3RF1-201ENST00000284637 CSRNP1Q96S65 589 aa17.7■□□□□ 0.42
SH3RF1-201ENST00000284637 XAB2Q9HCS7 855 aaKnown RBP17.7■□□□□ 0.42
SH3RF1-201ENST00000284637 CPSF1Q10570 1443 aaKnown RBP17.7■□□□□ 0.42
SH3RF1-201ENST00000284637 A0A0G2JND7 137 aa17.7■□□□□ 0.42
SH3RF1-201ENST00000284637 TFAMQ00059 246 aaKnown RBP17.7■□□□□ 0.42
SH3RF1-201ENST00000284637 SHC4Q6S5L8 630 aa17.7■□□□□ 0.42
SH3RF1-201ENST00000284637 DNAAF3Q8N9W5 541 aa17.7■□□□□ 0.42
SH3RF1-201ENST00000284637 HIPK4Q8NE63 616 aa17.7■□□□□ 0.42
SH3RF1-201ENST00000284637 PYROXD1Q8WU10 500 aa17.7■□□□□ 0.42
SH3RF1-201ENST00000284637 DDX47Q9H0S4 455 aaKnown RBP17.7■□□□□ 0.42
SH3RF1-201ENST00000284637 LEMD3Q9Y2U8 911 aa17.7■□□□□ 0.42
SH3RF1-201ENST00000284637 MBD5Q9P267 1494 aa17.69■□□□□ 0.42
SH3RF1-201ENST00000284637 WDR46O15213 610 aaKnown RBP17.69■□□□□ 0.42
SH3RF1-201ENST00000284637 IL1RL1Q01638 556 aa17.69■□□□□ 0.42
SH3RF1-201ENST00000284637 KANSL2Q9H9L4 492 aa17.69■□□□□ 0.42
SH3RF1-201ENST00000284637 HAUS2Q9NVX0 235 aa17.69■□□□□ 0.42
SH3RF1-201ENST00000284637 STK32BQ9NY57 414 aa17.69■□□□□ 0.42
SH3RF1-201ENST00000284637 BAG5Q9UL15 447 aa17.69■□□□□ 0.42
SH3RF1-201ENST00000284637 USP6P35125 1406 aa17.69■□□□□ 0.42
SH3RF1-201ENST00000284637 STXBP3O00186 592 aa17.69■□□□□ 0.42
SH3RF1-201ENST00000284637 CFLARO15519 480 aa17.69■□□□□ 0.42
SH3RF1-201ENST00000284637 MGEA5O60502 916 aa17.69■□□□□ 0.42
SH3RF1-201ENST00000284637 STMN1P16949 149 aa17.69■□□□□ 0.42
SH3RF1-201ENST00000284637 NCF2P19878 526 aaPredicted RBP17.69■□□□□ 0.42
SH3RF1-201ENST00000284637 PCGF5Q86SE9 256 aa17.69■□□□□ 0.42
SH3RF1-201ENST00000284637 KCNV2Q8TDN2 545 aa17.69■□□□□ 0.42
SH3RF1-201ENST00000284637 MRPL46Q9H2W6 279 aaKnown RBP17.69■□□□□ 0.42
SH3RF1-201ENST00000284637 POLD4Q9HCU8 107 aa17.69■□□□□ 0.42
SH3RF1-201ENST00000284637 CEP72Q9P209 647 aa17.69■□□□□ 0.42
SH3RF1-201ENST00000284637 DNAJC12Q9UKB3 198 aa17.69■□□□□ 0.42
SH3RF1-201ENST00000284637 LMTK3Q96Q04 1460 aa17.69■□□□□ 0.42
SH3RF1-201ENST00000284637 INO80B-WBP1J3KQ70 363 aa17.69■□□□□ 0.42
SH3RF1-201ENST00000284637 HOXA13P31271 388 aaPredicted RBP17.69■□□□□ 0.42
SH3RF1-201ENST00000284637 CASP2P42575 452 aa17.69■□□□□ 0.42
SH3RF1-201ENST00000284637 IQCB1Q15051 598 aa17.69■□□□□ 0.42
SH3RF1-201ENST00000284637 RHOT2Q8IXI1 618 aa17.69■□□□□ 0.42
SH3RF1-201ENST00000284637 KCTD6Q8NC69 237 aa17.69■□□□□ 0.42
SH3RF1-201ENST00000284637 CFAP36Q96G28 342 aa17.69■□□□□ 0.42
SH3RF1-201ENST00000284637 INO80BQ9C086 356 aaPredicted RBP17.69■□□□□ 0.42
SH3RF1-201ENST00000284637 PACSIN2Q9UNF0 486 aaPredicted RBP17.69■□□□□ 0.42
SH3RF1-201ENST00000284637 CLRN2A0PK11 232 aa17.69■□□□□ 0.42
SH3RF1-201ENST00000284637 SPDYE16A6NNV3 312 aaPredicted RBP17.69■□□□□ 0.42
SH3RF1-201ENST00000284637 SPDYE2Q495Y8 402 aa17.69■□□□□ 0.42
SH3RF1-201ENST00000284637 CEP70Q8NHQ1 597 aa17.69■□□□□ 0.42
SH3RF1-201ENST00000284637 EPS15L1Q9UBC2 864 aa17.69■□□□□ 0.42
SH3RF1-201ENST00000284637 ATP1A1P05023 1023 aaKnown RBP17.68■□□□□ 0.42
SH3RF1-201ENST00000284637 MB21D2Q8IYB1 491 aaPredicted RBP17.68■□□□□ 0.42
SH3RF1-201ENST00000284637 ZNF473Q8WTR7 871 aaKnown RBP17.68■□□□□ 0.42
SH3RF1-201ENST00000284637 CCT8L2Q96SF2 557 aa17.68■□□□□ 0.42
SH3RF1-201ENST00000284637 APOL6Q9BWW8 343 aa17.68■□□□□ 0.42
SH3RF1-201ENST00000284637 KIF28PB7ZC32 967 aa17.68■□□□□ 0.42
SH3RF1-201ENST00000284637 HNRNPCP07910 306 aaKnown RBP eCLIP17.68■□□□□ 0.42
SH3RF1-201ENST00000284637 BMP3P12645 472 aa17.68■□□□□ 0.42
SH3RF1-201ENST00000284637 PHEXP78562 749 aa17.68■□□□□ 0.42
SH3RF1-201ENST00000284637 TNFAIP1Q13829 316 aa17.68■□□□□ 0.42
SH3RF1-201ENST00000284637 PDIK1LQ8N165 341 aa17.68■□□□□ 0.42
SH3RF1-201ENST00000284637 IL17RAQ96F46 866 aa17.68■□□□□ 0.42
SH3RF1-201ENST00000284637 CHMP6Q96FZ7 201 aa17.68■□□□□ 0.42
SH3RF1-201ENST00000284637 AS3MTQ9HBK9 375 aa17.68■□□□□ 0.42
SH3RF1-201ENST00000284637 PODXLO00592 558 aa17.68■□□□□ 0.42
SH3RF1-201ENST00000284637 CYP2D6P10635 497 aa17.68■□□□□ 0.42
SH3RF1-201ENST00000284637 PPP4R3CPQ6ZMV5 832 aa17.68■□□□□ 0.42
SH3RF1-201ENST00000284637 SLC17A8Q8NDX2 589 aa17.68■□□□□ 0.42
SH3RF1-201ENST00000284637 HEMGNQ9BXL5 484 aa17.68■□□□□ 0.42
SH3RF1-201ENST00000284637 SAYSD1Q9NPB0 183 aa17.68■□□□□ 0.42
SH3RF1-201ENST00000284637 DCTN3O75935 186 aa17.68■□□□□ 0.42
SH3RF1-201ENST00000284637 ZNF211Q13398 564 aaPredicted RBP17.68■□□□□ 0.42
SH3RF1-201ENST00000284637 KIF22Q14807 665 aa17.68■□□□□ 0.42
SH3RF1-201ENST00000284637 SRRM1Q8IYB3 904 aaKnown RBP17.68■□□□□ 0.42
SH3RF1-201ENST00000284637 GUCY1A3Q02108 690 aa17.67■□□□□ 0.42
SH3RF1-201ENST00000284637 ANKRD20A4Q4UJ75 823 aa17.67■□□□□ 0.42
SH3RF1-201ENST00000284637 ANKRD20A8PQ5CZ79 823 aa17.67■□□□□ 0.42
SH3RF1-201ENST00000284637 ANKRD20A2Q5SQ80 823 aa17.67■□□□□ 0.42
SH3RF1-201ENST00000284637 ANKRD20A1Q5TYW2 823 aa17.67■□□□□ 0.42
SH3RF1-201ENST00000284637 CENPUQ71F23 418 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms