RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 ZC3H18Q86VM9 953 aaKnown RBP6.16□□□□□ -1.42
CCDC54-201ENST00000261058 PASD1Q8IV76 773 aa6.16□□□□□ -1.42
CCDC54-201ENST00000261058 MENTQ9BUN1 341 aa6.16□□□□□ -1.42
CCDC54-201ENST00000261058 PCDH18Q9HCL0 1135 aa6.16□□□□□ -1.42
CCDC54-201ENST00000261058 TOMM22Q9NS69 142 aa6.16□□□□□ -1.42
CCDC54-201ENST00000261058 RNF114Q9Y508 228 aa6.16□□□□□ -1.42
CCDC54-201ENST00000261058 LSP1P33241 339 aa6.15□□□□□ -1.43
CCDC54-201ENST00000261058 EPHB3P54753 998 aa6.15□□□□□ -1.43
CCDC54-201ENST00000261058 MOGSQ13724 837 aa6.15□□□□□ -1.43
CCDC54-201ENST00000261058 LIPIQ6XZB0 460 aa6.15□□□□□ -1.43
CCDC54-201ENST00000261058 RASSF3Q86WH2 238 aa6.15□□□□□ -1.43
CCDC54-201ENST00000261058 NME9Q86XW9 330 aa6.15□□□□□ -1.43
CCDC54-201ENST00000261058 DTX3Q8N9I9 347 aa6.15□□□□□ -1.43
CCDC54-201ENST00000261058 COG1Q8WTW3 980 aa6.15□□□□□ -1.43
CCDC54-201ENST00000261058 GBP4Q96PP9 640 aa6.15□□□□□ -1.43
CCDC54-201ENST00000261058 YIPF4Q9BSR8 244 aa6.15□□□□□ -1.43
CCDC54-201ENST00000261058 ASPSCR1Q9BZE9 553 aa6.15□□□□□ -1.43
CCDC54-201ENST00000261058 VTA1Q9NP79 307 aa6.15□□□□□ -1.43
CCDC54-201ENST00000261058 USP36Q9P275 1121 aaKnown RBP6.15□□□□□ -1.43
CCDC54-201ENST00000261058 KRT1P04264 644 aa6.14□□□□□ -1.43
CCDC54-201ENST00000261058 MED14OSP0DP75 135 aa6.14□□□□□ -1.43
CCDC54-201ENST00000261058 PFKLP17858 780 aa6.14□□□□□ -1.43
CCDC54-201ENST00000261058 GLDCP23378 1020 aa6.14□□□□□ -1.43
CCDC54-201ENST00000261058 CD40P25942 277 aa6.14□□□□□ -1.43
CCDC54-201ENST00000261058 NCKAP1LP55160 1127 aa6.14□□□□□ -1.43
CCDC54-201ENST00000261058 ADCY1Q08828 1119 aa6.14□□□□□ -1.43
CCDC54-201ENST00000261058 INAVAQ3KP66 663 aa6.14□□□□□ -1.43
CCDC54-201ENST00000261058 PLEKHG6Q3KR16 790 aa6.14□□□□□ -1.43
CCDC54-201ENST00000261058 CD300LDQ6UXZ3 194 aa6.14□□□□□ -1.43
CCDC54-201ENST00000261058 FERMT3Q86UX7 667 aa6.14□□□□□ -1.43
CCDC54-201ENST00000261058 CILP2Q8IUL8 1156 aa6.14□□□□□ -1.43
CCDC54-201ENST00000261058 CNTD1Q8N815 330 aa6.14□□□□□ -1.43
CCDC54-201ENST00000261058 LINC00482Q8N8I6 264 aa6.14□□□□□ -1.43
CCDC54-201ENST00000261058 SMARCC2Q8TAQ2 1214 aa6.14□□□□□ -1.43
CCDC54-201ENST00000261058 IGDCC4Q8TDY8 1250 aa6.14□□□□□ -1.43
CCDC54-201ENST00000261058 SGPP1Q9BX95 441 aa6.14□□□□□ -1.43
CCDC54-201ENST00000261058 ZDHHC5Q9C0B5 715 aa6.14□□□□□ -1.43
CCDC54-201ENST00000261058 IRF2BPLQ9H1B7 796 aa6.14□□□□□ -1.43
CCDC54-201ENST00000261058 RBPJLQ9UBG7 517 aa6.14□□□□□ -1.43
CCDC54-201ENST00000261058 RAB11FIP3O75154 756 aa6.13□□□□□ -1.43
CCDC54-201ENST00000261058 KATNA1O75449 491 aa6.13□□□□□ -1.43
CCDC54-201ENST00000261058 ENO2P09104 434 aaPredicted RBP6.13□□□□□ -1.43
CCDC54-201ENST00000261058 CYP2C8P10632 490 aa6.13□□□□□ -1.43
CCDC54-201ENST00000261058 PTGS1P23219 599 aa6.13□□□□□ -1.43
CCDC54-201ENST00000261058 MC4RP32245 332 aa6.13□□□□□ -1.43
CCDC54-201ENST00000261058 ITGA1P56199 1179 aa6.13□□□□□ -1.43
CCDC54-201ENST00000261058 DLG4P78352 724 aa6.13□□□□□ -1.43
CCDC54-201ENST00000261058 HTRA3P83110 453 aa6.13□□□□□ -1.43
CCDC54-201ENST00000261058 ADAM9Q13443 819 aa6.13□□□□□ -1.43
CCDC54-201ENST00000261058 IQSEC1Q6DN90 963 aa6.13□□□□□ -1.43
CCDC54-201ENST00000261058 CBARPQ8N350 705 aaPredicted RBP6.13□□□□□ -1.43
CCDC54-201ENST00000261058 ZNF496Q96IT1 587 aaPredicted RBP6.13□□□□□ -1.43
CCDC54-201ENST00000261058 TMEM209Q96SK2 561 aa6.13□□□□□ -1.43
CCDC54-201ENST00000261058 FOXB1Q99853 325 aa6.13□□□□□ -1.43
CCDC54-201ENST00000261058 GORASP1Q9BQQ3 440 aa6.13□□□□□ -1.43
CCDC54-201ENST00000261058 MS4A5Q9H3V2 200 aa6.13□□□□□ -1.43
CCDC54-201ENST00000261058 DLL4Q9NR61 685 aa6.13□□□□□ -1.43
CCDC54-201ENST00000261058 MAFO75444 373 aaPredicted RBP6.12□□□□□ -1.43
CCDC54-201ENST00000261058 PRLP01236 227 aa6.12□□□□□ -1.43
CCDC54-201ENST00000261058 PFKPQ01813 784 aa6.12□□□□□ -1.43
CCDC54-201ENST00000261058 ALDH6A1Q02252 535 aaKnown RBP6.12□□□□□ -1.43
CCDC54-201ENST00000261058 FAM50AQ14320 339 aaKnown RBP6.12□□□□□ -1.43
CCDC54-201ENST00000261058 SYDE2Q5VT97 1194 aa6.12□□□□□ -1.43
CCDC54-201ENST00000261058 VASNQ6EMK4 673 aa6.12□□□□□ -1.43
CCDC54-201ENST00000261058 HDGFL2Q7Z4V5 671 aaPredicted RBP6.12□□□□□ -1.43
CCDC54-201ENST00000261058 TMEFF1Q8IYR6 380 aa6.12□□□□□ -1.43
CCDC54-201ENST00000261058 RTF1Q92541 710 aaKnown RBP6.12□□□□□ -1.43
CCDC54-201ENST00000261058 ORAI2Q96SN7 254 aa6.12□□□□□ -1.43
CCDC54-201ENST00000261058 SYT3Q9BQG1 590 aa6.12□□□□□ -1.43
CCDC54-201ENST00000261058 AMNQ9BXJ7 453 aa6.12□□□□□ -1.43
CCDC54-201ENST00000261058 ETV2O00321 342 aaPredicted RBP6.11□□□□□ -1.43
CCDC54-201ENST00000261058 NFIBO00712 420 aa6.11□□□□□ -1.43
CCDC54-201ENST00000261058 GABRDO14764 452 aa6.11□□□□□ -1.43
CCDC54-201ENST00000261058 TMEM253P0C7T8 217 aa6.11□□□□□ -1.43
CCDC54-201ENST00000261058 FOXO4P98177 505 aa6.11□□□□□ -1.43
CCDC54-201ENST00000261058 RTP5Q14D33 572 aa6.11□□□□□ -1.43
CCDC54-201ENST00000261058 STILQ15468 1287 aa6.11□□□□□ -1.43
CCDC54-201ENST00000261058 SKIDA1Q1XH10 827 aa6.11□□□□□ -1.43
CCDC54-201ENST00000261058 FRMD7Q6ZUT3 714 aa6.11□□□□□ -1.43
CCDC54-201ENST00000261058 KANSL1Q7Z3B3 1105 aa6.11□□□□□ -1.43
CCDC54-201ENST00000261058 PHYKPLQ8IUZ5 450 aa6.11□□□□□ -1.43
CCDC54-201ENST00000261058 E2F7Q96AV8 911 aa6.11□□□□□ -1.43
CCDC54-201ENST00000261058 DDX11Q96FC9 970 aa6.11□□□□□ -1.43
CCDC54-201ENST00000261058 MAML3Q96JK9 1138 aa6.11□□□□□ -1.43
CCDC54-201ENST00000261058 C11orf84Q9BUA3 381 aaPredicted RBP6.11□□□□□ -1.43
CCDC54-201ENST00000261058 EPB41L4AQ9HCS5 686 aaPredicted RBP6.11□□□□□ -1.43
CCDC54-201ENST00000261058 SLC39A2Q9NP94 309 aa6.11□□□□□ -1.43
CCDC54-201ENST00000261058 INCENPQ9NQS7 918 aa6.11□□□□□ -1.43
CCDC54-201ENST00000261058 TOPORSQ9NS56 1045 aaPredicted RBP6.11□□□□□ -1.43
CCDC54-201ENST00000261058 GALNT8Q9NY28 637 aa6.11□□□□□ -1.43
CCDC54-201ENST00000261058 ARHGAP28Q9P2N2 729 aa6.11□□□□□ -1.43
CCDC54-201ENST00000261058 IL18BPO95998 194 aa6.1□□□□□ -1.43
CCDC54-201ENST00000261058 HMGB1P09429 215 aaKnown RBP6.1□□□□□ -1.43
CCDC54-201ENST00000261058 CAP1Q01518 475 aa6.1□□□□□ -1.43
CCDC54-201ENST00000261058 PDCD1Q15116 288 aa6.1□□□□□ -1.43
CCDC54-201ENST00000261058 TMEM132EQ6IEE7 984 aa6.1□□□□□ -1.43
CCDC54-201ENST00000261058 HIPK4Q8NE63 616 aa6.1□□□□□ -1.43
CCDC54-201ENST00000261058 BHLHE22Q8NFJ8 381 aaPredicted RBP6.1□□□□□ -1.43
CCDC54-201ENST00000261058 LMBR1Q8WVP7 490 aa6.1□□□□□ -1.43
CCDC54-201ENST00000261058 AHCYL2Q96HN2 611 aaKnown RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms