RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 TSR3Q9UJK0 312 aaKnown RBP14.24□□□□□ -0.13
COL1A1-201ENST00000225964 TPX2Q9ULW0 747 aaKnown RBP14.24□□□□□ -0.13
COL1A1-201ENST00000225964 GCC2Q8IWJ2 1684 aa14.24□□□□□ -0.13
COL1A1-201ENST00000225964 ABCB11O95342 1321 aa14.24□□□□□ -0.13
COL1A1-201ENST00000225964 ACCSLQ4AC99 568 aa14.24□□□□□ -0.13
COL1A1-201ENST00000225964 GIMAP8Q8ND71 665 aaPredicted RBP14.24□□□□□ -0.13
COL1A1-201ENST00000225964 PPP1R13BQ96KQ4 1090 aa14.24□□□□□ -0.13
COL1A1-201ENST00000225964 WRNIP1Q96S55 665 aa14.24□□□□□ -0.13
COL1A1-201ENST00000225964 ZHX2Q9Y6X8 837 aa14.24□□□□□ -0.13
COL1A1-201ENST00000225964 RGS12O14924 1447 aa14.24□□□□□ -0.13
COL1A1-201ENST00000225964 SH2B2O14492 632 aaPredicted RBP14.23□□□□□ -0.13
COL1A1-201ENST00000225964 SNX2O60749 519 aa14.23□□□□□ -0.13
COL1A1-201ENST00000225964 SRRM1Q8IYB3 904 aaKnown RBP14.23□□□□□ -0.13
COL1A1-201ENST00000225964 FSD1LQ9BXM9 530 aa14.23□□□□□ -0.13
COL1A1-201ENST00000225964 ZMYND10O75800 440 aa14.23□□□□□ -0.13
COL1A1-201ENST00000225964 SERPING1P05155 500 aa14.23□□□□□ -0.13
COL1A1-201ENST00000225964 CDC25AP30304 524 aa14.23□□□□□ -0.13
COL1A1-201ENST00000225964 JAK3P52333 1124 aa14.23□□□□□ -0.13
COL1A1-201ENST00000225964 TNFAIP2Q03169 654 aa14.23□□□□□ -0.13
COL1A1-201ENST00000225964 ANO4Q32M45 955 aa14.23□□□□□ -0.13
COL1A1-201ENST00000225964 GPR108Q9NPR9 543 aa14.23□□□□□ -0.13
COL1A1-201ENST00000225964 FAF1Q9UNN5 650 aaPredicted RBP14.23□□□□□ -0.13
COL1A1-201ENST00000225964 DCAF4L1Q3SXM0 396 aa14.23□□□□□ -0.13
COL1A1-201ENST00000225964 ZNF394Q53GI3 561 aa14.23□□□□□ -0.13
COL1A1-201ENST00000225964 COPRSQ9NQ92 184 aa14.23□□□□□ -0.13
COL1A1-201ENST00000225964 PTPRTO14522 1441 aa14.23□□□□□ -0.13
COL1A1-201ENST00000225964 CFLARO15519 480 aa14.23□□□□□ -0.13
COL1A1-201ENST00000225964 ECE2O60344 883 aa14.23□□□□□ -0.13
COL1A1-201ENST00000225964 PSMD2Q13200 908 aa14.23□□□□□ -0.13
COL1A1-201ENST00000225964 DCAF4Q8WV16 495 aa14.23□□□□□ -0.13
COL1A1-201ENST00000225964 MYO5CQ9NQX4 1742 aa14.23□□□□□ -0.13
COL1A1-201ENST00000225964 PGRMC1O00264 195 aaKnown RBP14.23□□□□□ -0.13
COL1A1-201ENST00000225964 TAC1P20366 129 aa14.23□□□□□ -0.13
COL1A1-201ENST00000225964 SLCO1A2P46721 670 aa14.23□□□□□ -0.13
COL1A1-201ENST00000225964 GPC3P51654 580 aa14.23□□□□□ -0.13
COL1A1-201ENST00000225964 MXD4Q14582 209 aaPredicted RBP14.23□□□□□ -0.13
COL1A1-201ENST00000225964 ADCK5Q3MIX3 580 aa14.23□□□□□ -0.13
COL1A1-201ENST00000225964 ATG16L1Q676U5 607 aa14.23□□□□□ -0.13
COL1A1-201ENST00000225964 PI16Q6UXB8 463 aa14.23□□□□□ -0.13
COL1A1-201ENST00000225964 PIGOQ8TEQ8 1089 aa14.23□□□□□ -0.13
COL1A1-201ENST00000225964 SUFUQ9UMX1 484 aa14.23□□□□□ -0.13
COL1A1-201ENST00000225964 NR5A1Q13285 461 aa14.23□□□□□ -0.13
COL1A1-201ENST00000225964 ALCAMQ13740 583 aa14.23□□□□□ -0.13
COL1A1-201ENST00000225964 ZNF667Q5HYK9 610 aa14.23□□□□□ -0.13
COL1A1-201ENST00000225964 TRMT10CQ7L0Y3 403 aaKnown RBP14.23□□□□□ -0.13
COL1A1-201ENST00000225964 FBXO18Q8NFZ0 1043 aa14.23□□□□□ -0.13
COL1A1-201ENST00000225964 BCAS4Q8TDM0 211 aa14.23□□□□□ -0.13
COL1A1-201ENST00000225964 PZPP20742 1482 aa14.22□□□□□ -0.13
COL1A1-201ENST00000225964 LDHAP00338 332 aaKnown RBP14.22□□□□□ -0.13
COL1A1-201ENST00000225964 OCRLQ01968 901 aa14.22□□□□□ -0.13
COL1A1-201ENST00000225964 TMEM179Q6ZVK1 233 aa14.22□□□□□ -0.13
COL1A1-201ENST00000225964 BZW1Q7L1Q6 419 aaKnown RBP14.22□□□□□ -0.13
COL1A1-201ENST00000225964 NHEJ1Q9H9Q4 299 aaPredicted RBP14.22□□□□□ -0.13
COL1A1-201ENST00000225964 NGRNQ9NPE2 291 aaKnown RBP14.22□□□□□ -0.13
COL1A1-201ENST00000225964 RNF181Q9P0P0 153 aa14.22□□□□□ -0.13
COL1A1-201ENST00000225964 PCDHA6Q9UN73 950 aa14.22□□□□□ -0.13
COL1A1-201ENST00000225964 PCDHA8Q9Y5H6 950 aa14.22□□□□□ -0.13
COL1A1-201ENST00000225964 NNMTP40261 264 aa14.22□□□□□ -0.13
COL1A1-201ENST00000225964 FKBP3Q00688 224 aaKnown RBP14.22□□□□□ -0.13
COL1A1-201ENST00000225964 SLC39A14Q15043 492 aa14.22□□□□□ -0.13
COL1A1-201ENST00000225964 BBS9Q3SYG4 887 aa14.22□□□□□ -0.13
COL1A1-201ENST00000225964 YAF2Q8IY57 180 aa14.22□□□□□ -0.13
COL1A1-201ENST00000225964 CCDC197Q8NCU1 140 aa14.22□□□□□ -0.13
COL1A1-201ENST00000225964 H3BRJ5 948 aa14.22□□□□□ -0.13
COL1A1-201ENST00000225964 SASH1O94885 1247 aa14.22□□□□□ -0.13
COL1A1-201ENST00000225964 PHKA2P46019 1235 aa14.22□□□□□ -0.13
COL1A1-201ENST00000225964 PPP6R3Q5H9R7 873 aaPredicted RBP14.22□□□□□ -0.13
COL1A1-201ENST00000225964 MFSD14CQ5VZR4 134 aa14.22□□□□□ -0.13
COL1A1-201ENST00000225964 PASD1Q8IV76 773 aa14.22□□□□□ -0.13
COL1A1-201ENST00000225964 TRIM59Q8IWR1 403 aa14.22□□□□□ -0.13
COL1A1-201ENST00000225964 HOXC10Q9NYD6 342 aa14.22□□□□□ -0.13
COL1A1-201ENST00000225964 RWDD2AQ9UIY3 292 aa14.22□□□□□ -0.13
COL1A1-201ENST00000225964 FEM1BQ9UK73 627 aa14.22□□□□□ -0.13
COL1A1-201ENST00000225964 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.22□□□□□ -0.13
COL1A1-201ENST00000225964 F5H423 210 aaPredicted RBP14.22□□□□□ -0.13
COL1A1-201ENST00000225964 PER1O15534 1290 aaPredicted RBP14.22□□□□□ -0.13
COL1A1-201ENST00000225964 EEF1B2P24534 225 aaKnown RBP14.22□□□□□ -0.13
COL1A1-201ENST00000225964 ZNF568Q3ZCX4 644 aa14.22□□□□□ -0.13
COL1A1-201ENST00000225964 SUSD4Q5VX71 490 aa14.22□□□□□ -0.13
COL1A1-201ENST00000225964 SMAP1Q8IYB5 467 aaPredicted RBP14.22□□□□□ -0.13
COL1A1-201ENST00000225964 MAML1Q92585 1016 aa14.22□□□□□ -0.13
COL1A1-201ENST00000225964 SARS2Q9NP81 518 aaKnown RBP14.22□□□□□ -0.13
COL1A1-201ENST00000225964 PCDHA5Q9Y5H7 936 aa14.22□□□□□ -0.13
COL1A1-201ENST00000225964 CREB3O43889 395 aa14.22□□□□□ -0.13
COL1A1-201ENST00000225964 HUS1O60921 280 aa14.22□□□□□ -0.13
COL1A1-201ENST00000225964 SEPT2Q15019 361 aa14.22□□□□□ -0.13
COL1A1-201ENST00000225964 ZSCAN26Q16670 478 aa14.22□□□□□ -0.13
COL1A1-201ENST00000225964 GLE1Q53GS7 698 aaKnown RBP14.22□□□□□ -0.13
COL1A1-201ENST00000225964 NCLNQ969V3 563 aa14.22□□□□□ -0.13
COL1A1-201ENST00000225964 PBKQ96KB5 322 aa14.22□□□□□ -0.13
COL1A1-201ENST00000225964 SYNDIG1Q9H7V2 258 aa14.22□□□□□ -0.13
COL1A1-201ENST00000225964 PCDHA13Q9Y5I0 950 aa14.22□□□□□ -0.13
COL1A1-201ENST00000225964 PRPF3O43395 683 aaKnown RBP14.21□□□□□ -0.13
COL1A1-201ENST00000225964 TRPA1O75762 1119 aa14.21□□□□□ -0.13
COL1A1-201ENST00000225964 KCNA1Q09470 495 aa14.21□□□□□ -0.13
COL1A1-201ENST00000225964 IMPG1Q17R60 797 aa14.21□□□□□ -0.13
COL1A1-201ENST00000225964 SNRNP48Q6IEG0 339 aaKnown RBP14.21□□□□□ -0.13
COL1A1-201ENST00000225964 LCA5Q86VQ0 697 aa14.21□□□□□ -0.13
COL1A1-201ENST00000225964 BEST2Q8NFU1 509 aa14.21□□□□□ -0.13
COL1A1-201ENST00000225964 PALLDQ8WX93 1383 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms