RNA–Protein interactions for RNA: ENSMUST00000139443.7

Hmgb1-208, Transcript of High mobility group protein B1, mousemouse

TSL 2 BASIC

Gene Hmgb1, Length 923 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-208ENSMUST00000139443 Rnaseh1O70338 285 aa17.31■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 CebpaP53566 359 aa17.31■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 LyarQ08288 388 aaKnown RBP17.31■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 March9Q3TZ87 348 aa17.31■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Ppp2r5cQ60996 524 aa17.31■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Cypt4Q6P925 153 aa17.31■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Dalrd3Q6PJN8 538 aa17.31■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Atp6v0d2Q80SY3 350 aa17.31■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Bbs9Q811G0 885 aa17.31■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Trim47Q8C0E3 641 aa17.31■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Vwa1Q8R2Z5 415 aa17.31■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 NptxrQ99J85 493 aa17.31■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Clp1Q99LI9 425 aa17.31■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Themis3Q9CU24 569 aa17.31■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 CenpsQ9D084 142 aa17.31■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Pus10Q9D3U0 527 aa17.31■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Stxbp4Q9WV89 557 aa17.31■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Eif2ak1Q9Z2R9 619 aa17.31■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Gm5737A0A140LI11 423 aa17.3■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Gm3095E9Q058 166 aa17.3■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Tnfaip1O70479 316 aa17.3■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Apba3O88888 571 aa17.3■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Aldh2P47738 519 aaKnown RBP17.3■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 PklrP53657 574 aa17.3■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Atp6v1dP57746 247 aa17.3■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Psmc5P62196 406 aa17.3■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Echdc2Q3TLP5 296 aa17.3■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Celf4Q7TSY6 486 aa17.3■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Sun2Q8BJS4 731 aa17.3■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Mettl24Q8CCB5 363 aa17.3■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 GlyctkQ8QZY2 523 aa17.3■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Eml3Q8VC03 897 aa17.3■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Cep57l1Q8VDS7 400 aa17.3■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Pcdhb12Q91Y07 789 aa17.3■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Clstn3Q99JH7 956 aa17.3■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 ZwintQ9CQU5 252 aa17.3■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Q9CYI0 393 aa17.3■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Capns2Q9D7J7 247 aa17.3■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Slc15a2Q9ES07 729 aa17.3■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Zfp213E9QAW0 468 aa17.29■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Vmn2r55G3UWZ4 781 aa17.29■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Gm3164L7N2B9 238 aa17.29■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Gm3264L7N2C5 238 aa17.29■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Vmn2r53L7N473 806 aa17.29■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 UgcgO88693 394 aa17.29■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Clcn3P51791 818 aa17.29■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 CgnP59242 1191 aa17.29■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Dph1Q5NCQ5 438 aa17.29■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 ScapQ6GQT6 1276 aa17.29■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Dusp11Q6NXK5 321 aaKnown RBP17.29■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Drc7Q6V3W6 876 aa17.29■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Hook2Q7TMK6 716 aa17.29■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Slc17a8Q8BFU8 601 aa17.29■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Pnma1Q8C1C8 353 aa17.29■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Nemp2Q8CB65 421 aa17.29■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Cntn6Q9JMB8 1028 aa17.29■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Akt3Q9WUA6 479 aa17.29■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Rgs2O08849 211 aa17.28■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Clec11aO88200 328 aa17.28■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Dnm2P39054 870 aaKnown RBP17.28■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Fam198aQ3UY90 562 aa17.28■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Trpc6Q61143 930 aa17.28■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Tgoln2Q62314 363 aa17.28■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 ChpfQ6IQX7 774 aa17.28■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Glis1Q8K1M4 789 aa17.28■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Trim29Q8R2Q0 587 aa17.28■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 FcrlaQ920A9 352 aa17.28■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Apobec3Q99J72 440 aaKnown RBP17.28■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Smc3Q9CW03 1217 aaKnown RBP17.28■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 VasnQ9CZT5 673 aa17.28■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Wfdc1Q9ESH5 211 aa17.28■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Kank3Q9Z1P7 791 aa17.28■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Cyp4a29A0A087WPC3 509 aa17.27■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Ptchd4B9EKX1 904 aa17.27■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Elmsan1E9Q2I4 1089 aaKnown RBP17.27■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Gfpt1P47856 697 aa17.27■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Bpifa6Q0VGU8 367 aa17.27■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 DSCC1Q14AI0 399 aa17.27■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Ddx19aQ61655 478 aaKnown RBP17.27■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Epha7Q61772 998 aa17.27■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Defa-rs10Q64263 91 aa17.27■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Ccdc82Q6PG04 518 aa17.27■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Znf445Q8R2V3 986 aa17.27■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Sucla2Q9Z2I9 463 aa17.27■□□□□ 0.36
Hmgb1-208ENSMUST00000139443 Gm4924A0A1B0GR71 966 aa17.26■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 SafbD3YXK2 937 aaKnown RBP17.26■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Gm8909G3UXE9 396 aa17.26■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Bcat1P24288 386 aa17.26■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Mark2Q05512 776 aa17.26■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Kmt5aQ2YDW7 349 aa17.26■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Trappc10Q3TLI0 1259 aa17.26■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Plppr4Q7TME0 766 aa17.26■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Map3k11Q80XI6 850 aa17.26■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Me3Q8BMF3 604 aa17.26■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 4931406P16RikQ8C5X1 1059 aa17.26■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Adgrg3Q8R0T6 542 aa17.26■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Atg13Q91YI1 516 aa17.26■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Cwh43Q91YL7 699 aa17.26■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Rpn1Q91YQ5 608 aaKnown RBP17.26■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Bloc1s2Q9CWG9 143 aa17.26■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 25 ms