RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Tbrg4Q91YM4 630 aaKnown RBP18.39■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Ces3aQ63880 571 aa18.38■□□□□ 0.53
Ctcf-201ENSMUST00000005841 GmipQ6PGG2 971 aa18.38■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Rint1Q8BZ36 792 aa18.38■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Pym1Q8CHP5 203 aaKnown RBP18.38■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Ces3bQ8VCU1 571 aa18.38■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Ears2Q9CXJ1 523 aa18.38■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Cfap57Q9D180 1249 aa18.38■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Gm5114W4VSN8 858 aa18.38■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Eftud2O08810 971 aaKnown RBP18.38■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Sept2P42208 361 aaKnown RBP18.38■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Epha7Q61772 998 aa18.38■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Krt9Q6RHW0 743 aa18.38■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Dennd2aQ8C4S8 1000 aa18.38■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Ssr1Q9CY50 286 aaKnown RBP18.38■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Patl2A2ARM1 529 aa18.38■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Tp53P02340 387 aa18.38■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Wfs1P56695 890 aa18.38■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Madcam1Q61826 405 aa18.38■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Prss23Q9D6X6 382 aa18.38■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Sept14Q9DA97 430 aa18.38■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Akr1c19G3X9Y6 323 aa18.37■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Rfpl4bJ3QPR6 266 aa18.37■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Gdap1O88741 358 aa18.37■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Abcb4P21440 1276 aa18.37■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Akr1b1P45376 316 aa18.37■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Znf652Q5DU09 608 aa18.37■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Bola2Q8BGS2 86 aa18.37■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Wasf2Q8BH43 497 aa18.37■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Eif2b5Q8CHW4 717 aa18.37■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Onecut3Q8K557 490 aa18.37■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Nsmce1Q9D720 266 aa18.37■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Tmem47Q9JJG6 181 aa18.37■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Znf394Q9Z1D9 521 aa18.37■□□□□ 0.53
Ctcf-201ENSMUST00000005841 FdxrQ61578 494 aa18.37■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Fmnl3Q6ZPF4 1028 aa18.37■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Q8BGC1 442 aa18.37■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Unc5bQ8K1S3 945 aa18.37■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Heg1E9Q7X6 1337 aa18.37■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Rgsl1H3BL40 1073 aa18.37■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Atp6v0a2P15920 856 aa18.37■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Actn1Q7TPR4 892 aaKnown RBP18.37■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Chn1Q91V57 459 aa18.37■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Abl1P00520 1123 aa18.36■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Cyb5d1Q5NCY3 228 aa18.36■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Psd2Q6P1I6 770 aa18.36■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Ccdc105Q9D4K7 499 aa18.36■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Stx8O88983 236 aa18.36■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Foxo6Q70KY4 559 aa18.36■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Efl1Q8C0D5 1127 aa18.36■□□□□ 0.53
Ctcf-201ENSMUST00000005841 SncbQ91ZZ3 133 aa18.36■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Ranbp17Q99NF8 1088 aa18.36■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Rabgef1Q9JM13 491 aa18.36■□□□□ 0.53
Ctcf-201ENSMUST00000005841 A0A286YCQ6 122 aa18.36■□□□□ 0.53
Ctcf-201ENSMUST00000005841 VimP20152 466 aaKnown RBP18.36■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Setd4P58467 439 aa18.36■□□□□ 0.53
Ctcf-201ENSMUST00000005841 KaznQ69ZS8 779 aa18.36■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Klhdc10Q6PAR0 439 aa18.36■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Nup133Q8R0G9 1155 aa18.36■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Ctage5Q8R311 779 aa18.36■□□□□ 0.53
Ctcf-201ENSMUST00000005841 EvplQ9D952 2035 aa18.35■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Cfap70D3YVL2 1141 aa18.35■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Parp2O88554 559 aa18.35■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Atp8a1P70704 1164 aa18.35■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Ehmt1Q5DW34 1296 aa18.35■□□□□ 0.53
Ctcf-201ENSMUST00000005841 E2f6O54917 272 aa18.35■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Xirp1O70373 1129 aa18.35■□□□□ 0.53
Ctcf-201ENSMUST00000005841 GnaqP21279 359 aa18.35■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Ephb2P54763 986 aa18.35■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Bzw2Q91VK1 419 aaKnown RBP18.35■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Lzts2Q91YU6 671 aa18.35■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Sf3b3Q921M3 1217 aaKnown RBP18.35■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Kcnh2O35219 1162 aa18.35■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Pgrmc1O55022 195 aa18.35■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Prl7d1P04769 244 aa18.35■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Ctnna2Q61301 953 aa18.35■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Chtf18Q8BIW9 969 aa18.35■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Ero1aQ8R180 464 aa18.35■□□□□ 0.53
Ctcf-201ENSMUST00000005841 TbcbQ9D1E6 244 aa18.35■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Mphosph6Q9D1Q1 161 aa18.35■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Mpp2Q9WV34 552 aa18.35■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Fer1l6E0CZ42 1862 aa18.35■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Srsf11E9Q6E5 511 aaKnown RBP18.34■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Gsg1l2M0QWL6 290 aa18.34■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Nsun7Q14AW5 724 aa18.34■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Ogfod1Q3U0K8 545 aa18.34■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Six1Q62231 284 aa18.34■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Psmd5Q8BJY1 504 aa18.34■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Azin2Q8BVM4 459 aa18.34■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Dr1Q91WV0 176 aa18.34■□□□□ 0.53
Ctcf-201ENSMUST00000005841 RnmtQ9D0L8 465 aaKnown RBP18.34■□□□□ 0.53
Ctcf-201ENSMUST00000005841 DgkiD3YWQ0 1071 aa18.34■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Ctnnal1O88327 731 aa18.34■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Dpcr1Q3TNW5 500 aa18.34■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Lca5Q80ST9 704 aa18.34■□□□□ 0.53
Ctcf-201ENSMUST00000005841 DlatQ8BMF4 642 aa18.34■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Rpa1Q8VEE4 623 aaKnown RBP18.34■□□□□ 0.53
Ctcf-201ENSMUST00000005841 Tsnaxip1Q99P25 704 aa18.34■□□□□ 0.53
Ctcf-201ENSMUST00000005841 IkbipQ9DBZ1 373 aa18.34■□□□□ 0.53
Ctcf-201ENSMUST00000005841 PlekQ9JHK5 350 aaKnown RBP18.34■□□□□ 0.53
Retrieved 100 of 22,080 RNA–protein pairs in 60.9 ms