RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 TRPC6Q9Y210 931 aa14.51□□□□□ -0.09
PHGDH-218ENST00000641491 ZSWIM8A7E2V4 1837 aa14.5□□□□□ -0.09
PHGDH-218ENST00000641491 SZT2Q5T011 3432 aa14.5□□□□□ -0.09
PHGDH-218ENST00000641491 DLL1O00548 723 aa14.5□□□□□ -0.09
PHGDH-218ENST00000641491 CCL5P13501 91 aa14.5□□□□□ -0.09
PHGDH-218ENST00000641491 CMA1P23946 247 aa14.5□□□□□ -0.09
PHGDH-218ENST00000641491 SYKP43405 635 aa14.5□□□□□ -0.09
PHGDH-218ENST00000641491 QARSP47897 775 aaKnown RBP14.5□□□□□ -0.09
PHGDH-218ENST00000641491 SLC26A2P50443 739 aa14.5□□□□□ -0.09
PHGDH-218ENST00000641491 SP2Q02086 613 aa14.5□□□□□ -0.09
PHGDH-218ENST00000641491 ARHGAP1Q07960 439 aa14.5□□□□□ -0.09
PHGDH-218ENST00000641491 GNASQ5JWF2 1037 aa14.5□□□□□ -0.09
PHGDH-218ENST00000641491 GJC2Q5T442 439 aaPredicted RBP14.5□□□□□ -0.09
PHGDH-218ENST00000641491 MAP3K21Q5TCX8 1036 aa14.5□□□□□ -0.09
PHGDH-218ENST00000641491 SWSAP1Q6NVH7 229 aa14.5□□□□□ -0.09
PHGDH-218ENST00000641491 IQUBQ8NA54 791 aa14.5□□□□□ -0.09
PHGDH-218ENST00000641491 BANK1Q8NDB2 785 aa14.5□□□□□ -0.09
PHGDH-218ENST00000641491 SYAP1Q96A49 352 aaPredicted RBP14.5□□□□□ -0.09
PHGDH-218ENST00000641491 GPR20Q99678 358 aa14.5□□□□□ -0.09
PHGDH-218ENST00000641491 LXNQ9BS40 222 aa14.5□□□□□ -0.09
PHGDH-218ENST00000641491 LRRC27Q9C0I9 530 aa14.5□□□□□ -0.09
PHGDH-218ENST00000641491 DNM3Q9UQ16 869 aa14.5□□□□□ -0.09
PHGDH-218ENST00000641491 ZNFX1Q9P2E3 1918 aaKnown RBP14.49□□□□□ -0.09
PHGDH-218ENST00000641491 SYNRGQ9UMZ2 1314 aa14.49□□□□□ -0.09
PHGDH-218ENST00000641491 DHX15O43143 795 aaKnown RBP14.49□□□□□ -0.09
PHGDH-218ENST00000641491 EDIL3O43854 480 aa14.49□□□□□ -0.09
PHGDH-218ENST00000641491 PPFIA4O75335 1185 aa14.49□□□□□ -0.09
PHGDH-218ENST00000641491 SSBP05455 408 aaKnown RBP eCLIP14.49□□□□□ -0.09
PHGDH-218ENST00000641491 KRT18P05783 430 aaKnown RBP14.49□□□□□ -0.09
PHGDH-218ENST00000641491 MMP3P08254 477 aa14.49□□□□□ -0.09
PHGDH-218ENST00000641491 MUTP22033 750 aa14.49□□□□□ -0.09
PHGDH-218ENST00000641491 MCM4P33991 863 aa14.49□□□□□ -0.09
PHGDH-218ENST00000641491 STAT5BP51692 787 aa14.49□□□□□ -0.09
PHGDH-218ENST00000641491 RESP18Q5W5W9 173 aa14.49□□□□□ -0.09
PHGDH-218ENST00000641491 TRMT1LQ7Z2T5 733 aaKnown RBP14.49□□□□□ -0.09
PHGDH-218ENST00000641491 KCTD17Q8N5Z5 321 aa14.49□□□□□ -0.09
PHGDH-218ENST00000641491 TRPV1Q8NER1 839 aa14.49□□□□□ -0.09
PHGDH-218ENST00000641491 LENG1Q96BZ8 264 aaPredicted RBP14.49□□□□□ -0.09
PHGDH-218ENST00000641491 DYDC2Q96IM9 177 aa14.49□□□□□ -0.09
PHGDH-218ENST00000641491 NACC1Q96RE7 527 aa14.49□□□□□ -0.09
PHGDH-218ENST00000641491 POLR3CQ9BUI4 534 aaPredicted RBP14.49□□□□□ -0.09
PHGDH-218ENST00000641491 UNC93B1Q9H1C4 597 aa14.49□□□□□ -0.09
PHGDH-218ENST00000641491 NRBP2Q9NSY0 501 aa14.49□□□□□ -0.09
PHGDH-218ENST00000641491 BMP2KQ9NSY1 1161 aaPredicted RBP14.49□□□□□ -0.09
PHGDH-218ENST00000641491 ERAP1Q9NZ08 941 aa14.49□□□□□ -0.09
PHGDH-218ENST00000641491 SEPT9Q9UHD8 586 aaPredicted RBP14.49□□□□□ -0.09
PHGDH-218ENST00000641491 USP25Q9UHP3 1055 aa14.49□□□□□ -0.09
PHGDH-218ENST00000641491 KCNH3Q9ULD8 1083 aa14.49□□□□□ -0.09
PHGDH-218ENST00000641491 GNEQ9Y223 722 aaKnown RBP14.49□□□□□ -0.09
PHGDH-218ENST00000641491 LCTP09848 1927 aa14.49□□□□□ -0.09
PHGDH-218ENST00000641491 ARHGEF35A5YM69 484 aa14.48□□□□□ -0.09
PHGDH-218ENST00000641491 CCNE2O96020 404 aa14.48□□□□□ -0.09
PHGDH-218ENST00000641491 PGK1P00558 417 aa14.48□□□□□ -0.09
PHGDH-218ENST00000641491 TFRCP02786 760 aaKnown RBP14.48□□□□□ -0.09
PHGDH-218ENST00000641491 PFKFB1P16118 471 aa14.48□□□□□ -0.09
PHGDH-218ENST00000641491 RPA1P27694 616 aa14.48□□□□□ -0.09
PHGDH-218ENST00000641491 GJA9P57773 515 aa14.48□□□□□ -0.09
PHGDH-218ENST00000641491 AMPD3Q01432 767 aa14.48□□□□□ -0.09
PHGDH-218ENST00000641491 CTTNQ14247 550 aaKnown RBP14.48□□□□□ -0.09
PHGDH-218ENST00000641491 KARSQ15046 597 aaKnown RBP14.48□□□□□ -0.09
PHGDH-218ENST00000641491 HSDL1Q3SXM5 330 aa14.48□□□□□ -0.09
PHGDH-218ENST00000641491 PDILTQ8N807 584 aa14.48□□□□□ -0.09
PHGDH-218ENST00000641491 DHX58Q96C10 678 aa14.48□□□□□ -0.09
PHGDH-218ENST00000641491 EPSTI1Q96J88 318 aa14.48□□□□□ -0.09
PHGDH-218ENST00000641491 ZNF333Q96JL9 665 aa14.48□□□□□ -0.09
PHGDH-218ENST00000641491 DEFB118Q96PH6 123 aa14.48□□□□□ -0.09
PHGDH-218ENST00000641491 CCSER1Q9C0I3 900 aa14.48□□□□□ -0.09
PHGDH-218ENST00000641491 CUEDC2Q9H467 287 aa14.48□□□□□ -0.09
PHGDH-218ENST00000641491 MAGEF1Q9HAY2 307 aa14.48□□□□□ -0.09
PHGDH-218ENST00000641491 DDX19AQ9NUU7 478 aaKnown RBP14.48□□□□□ -0.09
PHGDH-218ENST00000641491 STK17AQ9UEE5 414 aa14.48□□□□□ -0.09
PHGDH-218ENST00000641491 KIAA1024Q9UPX6 916 aa14.48□□□□□ -0.09
PHGDH-218ENST00000641491 MYH15Q9Y2K3 1946 aa14.48□□□□□ -0.09
PHGDH-218ENST00000641491 EMSYQ7Z589 1322 aa14.47□□□□□ -0.09
PHGDH-218ENST00000641491 LRRC37A2A6NM11 1700 aa14.47□□□□□ -0.09
PHGDH-218ENST00000641491 A0A1B0GVL5 298 aa14.47□□□□□ -0.09
PHGDH-218ENST00000641491 POTEB3A0JP26 581 aa14.47□□□□□ -0.09
PHGDH-218ENST00000641491 PP2D1A8MPX8 630 aa14.47□□□□□ -0.09
PHGDH-218ENST00000641491 EML1O00423 815 aa14.47□□□□□ -0.09
PHGDH-218ENST00000641491 POLR2DO15514 142 aaKnown RBP14.47□□□□□ -0.09
PHGDH-218ENST00000641491 CABYRO75952 493 aa14.47□□□□□ -0.09
PHGDH-218ENST00000641491 LGALS2P05162 132 aa14.47□□□□□ -0.09
PHGDH-218ENST00000641491 ZNF286BP0CG31 522 aa14.47□□□□□ -0.09
PHGDH-218ENST00000641491 CAPN2P17655 700 aa14.47□□□□□ -0.09
PHGDH-218ENST00000641491 MARK3P27448 753 aa14.47□□□□□ -0.09
PHGDH-218ENST00000641491 CDC25AP30304 524 aa14.47□□□□□ -0.09
PHGDH-218ENST00000641491 BEX3Q00994 111 aa14.47□□□□□ -0.09
PHGDH-218ENST00000641491 PRKCEQ02156 737 aa14.47□□□□□ -0.09
PHGDH-218ENST00000641491 FAM160A1Q05DH4 1040 aa14.47□□□□□ -0.09
PHGDH-218ENST00000641491 SKOR2Q2VWA4 1001 aaPredicted RBP14.47□□□□□ -0.09
PHGDH-218ENST00000641491 KANK3Q6NY19 840 aa14.47□□□□□ -0.09
PHGDH-218ENST00000641491 POTEBQ6S5H4 581 aa14.47□□□□□ -0.09
PHGDH-218ENST00000641491 ABHD15Q6UXT9 468 aa14.47□□□□□ -0.09
PHGDH-218ENST00000641491 PLPPR4Q7Z2D5 763 aa14.47□□□□□ -0.09
PHGDH-218ENST00000641491 EXOC8Q8IYI6 725 aa14.47□□□□□ -0.09
PHGDH-218ENST00000641491 CNNM3Q8NE01 707 aa14.47□□□□□ -0.09
PHGDH-218ENST00000641491 CCDC47Q96A33 483 aaKnown RBP14.47□□□□□ -0.09
PHGDH-218ENST00000641491 PLIN2Q99541 437 aa14.47□□□□□ -0.09
PHGDH-218ENST00000641491 MTG1Q9BT17 334 aaPredicted RBP14.47□□□□□ -0.09
PHGDH-218ENST00000641491 MOXD2PA6NHM9 499 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms