RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 CMTR2Q8IYT2 770 aaKnown RBP11.29□□□□□ -0.6
PHGDH-212ENST00000641247 MICAL1Q8TDZ2 1067 aa11.29□□□□□ -0.6
PHGDH-212ENST00000641247 USP26Q9BXU7 913 aa11.29□□□□□ -0.6
PHGDH-212ENST00000641247 DNAH14Q0VDD8 3507 aa11.29□□□□□ -0.6
PHGDH-212ENST00000641247 RALGAPA2Q2PPJ7 1873 aa11.29□□□□□ -0.6
PHGDH-212ENST00000641247 ZFHX4Q86UP3 3567 aa11.29□□□□□ -0.6
PHGDH-212ENST00000641247 FSCN2O14926 492 aa11.28□□□□□ -0.6
PHGDH-212ENST00000641247 ASGR2P07307 311 aa11.28□□□□□ -0.6
PHGDH-212ENST00000641247 TGFB3P10600 412 aa11.28□□□□□ -0.6
PHGDH-212ENST00000641247 TECP42680 631 aa11.28□□□□□ -0.6
PHGDH-212ENST00000641247 APOBRQ0VD83 1088 aa11.28□□□□□ -0.6
PHGDH-212ENST00000641247 SLC35G1Q2M3R5 365 aa11.28□□□□□ -0.6
PHGDH-212ENST00000641247 CWF19L1Q69YN2 538 aaKnown RBP11.28□□□□□ -0.6
PHGDH-212ENST00000641247 ASTLQ6HA08 431 aaPredicted RBP11.28□□□□□ -0.6
PHGDH-212ENST00000641247 KCNV1Q6PIU1 500 aa11.28□□□□□ -0.6
PHGDH-212ENST00000641247 ZBTB33Q86T24 672 aa11.28□□□□□ -0.6
PHGDH-212ENST00000641247 STAG2Q8N3U4 1231 aa11.28□□□□□ -0.6
PHGDH-212ENST00000641247 DNAJB3Q8WWF6 145 aa11.28□□□□□ -0.6
PHGDH-212ENST00000641247 PPP2R3CQ969Q6 453 aa11.28□□□□□ -0.6
PHGDH-212ENST00000641247 CNTNAP3BQ96NU0 1288 aa11.28□□□□□ -0.6
PHGDH-212ENST00000641247 NEK1Q96PY6 1258 aa11.28□□□□□ -0.6
PHGDH-212ENST00000641247 CNTNAP3Q9BZ76 1288 aa11.28□□□□□ -0.6
PHGDH-212ENST00000641247 CDY2AQ9Y6F7 541 aa11.28□□□□□ -0.6
PHGDH-212ENST00000641247 RIF1Q5UIP0 2472 aaKnown RBP11.28□□□□□ -0.6
PHGDH-212ENST00000641247 SPATA31C2B4DYI2 1134 aa11.27□□□□□ -0.61
PHGDH-212ENST00000641247 GNAT1P11488 350 aa11.27□□□□□ -0.61
PHGDH-212ENST00000641247 NPR3P17342 541 aa11.27□□□□□ -0.61
PHGDH-212ENST00000641247 LLGL2Q6P1M3 1020 aa11.27□□□□□ -0.61
PHGDH-212ENST00000641247 FAM227BQ96M60 508 aa11.27□□□□□ -0.61
PHGDH-212ENST00000641247 TMX1Q9H3N1 280 aa11.27□□□□□ -0.61
PHGDH-212ENST00000641247 RWDD1Q9H446 243 aaPredicted RBP11.27□□□□□ -0.61
PHGDH-212ENST00000641247 POMKQ9H5K3 350 aa11.27□□□□□ -0.61
PHGDH-212ENST00000641247 RTEL1Q9NZ71 1219 aa11.27□□□□□ -0.61
PHGDH-212ENST00000641247 SORCS3Q9UPU3 1222 aa11.27□□□□□ -0.61
PHGDH-212ENST00000641247 NEDD4P46934 1319 aa11.27□□□□□ -0.61
PHGDH-212ENST00000641247 HIDE1A8MVS5 230 aa11.26□□□□□ -0.61
PHGDH-212ENST00000641247 IGHDP01880 384 aa11.26□□□□□ -0.61
PHGDH-212ENST00000641247 WEE2P0C1S8 567 aa11.26□□□□□ -0.61
PHGDH-212ENST00000641247 HDAC1Q13547 482 aaPredicted RBP11.26□□□□□ -0.61
PHGDH-212ENST00000641247 FAM102BQ5T8I3 360 aa11.26□□□□□ -0.61
PHGDH-212ENST00000641247 KANK3Q6NY19 840 aa11.26□□□□□ -0.61
PHGDH-212ENST00000641247 METTL7BQ6UX53 244 aa11.26□□□□□ -0.61
PHGDH-212ENST00000641247 TSHZ1Q6ZSZ6 1077 aa11.26□□□□□ -0.61
PHGDH-212ENST00000641247 DGLUCYQ7Z3D6 616 aa11.26□□□□□ -0.61
PHGDH-212ENST00000641247 ZNF589Q86UQ0 364 aaPredicted RBP11.26□□□□□ -0.61
PHGDH-212ENST00000641247 DGKHQ86XP1 1220 aa11.26□□□□□ -0.61
PHGDH-212ENST00000641247 NPAS4Q8IUM7 802 aa11.26□□□□□ -0.61
PHGDH-212ENST00000641247 UBALD2Q8IYN6 164 aa11.26□□□□□ -0.61
PHGDH-212ENST00000641247 PNMA1Q8ND90 353 aa11.26□□□□□ -0.61
PHGDH-212ENST00000641247 TTC41PQ6P2S7 1318 aa11.26□□□□□ -0.61
PHGDH-212ENST00000641247 NRCAMQ92823 1304 aa11.26□□□□□ -0.61
PHGDH-212ENST00000641247 KIAA1217Q5T5P2 1943 aa11.25□□□□□ -0.61
PHGDH-212ENST00000641247 FAM186AA6NE01 2351 aa11.25□□□□□ -0.61
PHGDH-212ENST00000641247 A0A0D9SFI3 127 aa11.25□□□□□ -0.61
PHGDH-212ENST00000641247 MBLAC1A4D2B0 266 aaPredicted RBP11.25□□□□□ -0.61
PHGDH-212ENST00000641247 NOP56O00567 594 aaKnown RBP11.25□□□□□ -0.61
PHGDH-212ENST00000641247 FGF18O76093 207 aa11.25□□□□□ -0.61
PHGDH-212ENST00000641247 IBSPP21815 317 aaPredicted RBP11.25□□□□□ -0.61
PHGDH-212ENST00000641247 SP4Q02446 784 aa11.25□□□□□ -0.61
PHGDH-212ENST00000641247 TMEM62Q0P6H9 643 aa11.25□□□□□ -0.61
PHGDH-212ENST00000641247 MTMR3Q13615 1198 aa11.25□□□□□ -0.61
PHGDH-212ENST00000641247 GLIPR1L2Q4G1C9 344 aa11.25□□□□□ -0.61
PHGDH-212ENST00000641247 MFSD6Q6ZSS7 791 aa11.25□□□□□ -0.61
PHGDH-212ENST00000641247 FCHSD1Q86WN1 690 aa11.25□□□□□ -0.61
PHGDH-212ENST00000641247 KIAA2013Q8IYS2 634 aa11.25□□□□□ -0.61
PHGDH-212ENST00000641247 MTMR8Q96EF0 704 aa11.25□□□□□ -0.61
PHGDH-212ENST00000641247 GPATCH3Q96I76 525 aa11.25□□□□□ -0.61
PHGDH-212ENST00000641247 AMNQ9BXJ7 453 aa11.25□□□□□ -0.61
PHGDH-212ENST00000641247 LIMD1Q9UGP4 676 aa11.25□□□□□ -0.61
PHGDH-212ENST00000641247 PADI3Q9ULW8 664 aa11.25□□□□□ -0.61
PHGDH-212ENST00000641247 CCDC171Q6TFL3 1326 aa11.25□□□□□ -0.61
PHGDH-212ENST00000641247 GVINP1Q7Z2Y8 2422 aa11.25□□□□□ -0.61
PHGDH-212ENST00000641247 GSTTP1A0A1W2PQM5 241 aa11.24□□□□□ -0.61
PHGDH-212ENST00000641247 DHX16O60231 1041 aaKnown RBP11.24□□□□□ -0.61
PHGDH-212ENST00000641247 MGEA5O60502 916 aa11.24□□□□□ -0.61
PHGDH-212ENST00000641247 ATP9AO75110 1047 aa11.24□□□□□ -0.61
PHGDH-212ENST00000641247 MARK3P27448 753 aa11.24□□□□□ -0.61
PHGDH-212ENST00000641247 CCND2P30279 289 aa11.24□□□□□ -0.61
PHGDH-212ENST00000641247 CLCN5P51795 746 aa11.24□□□□□ -0.61
PHGDH-212ENST00000641247 ANGPT1Q15389 498 aa11.24□□□□□ -0.61
PHGDH-212ENST00000641247 GRIK4Q16099 956 aa11.24□□□□□ -0.61
PHGDH-212ENST00000641247 TMEM266Q2M3C6 531 aa11.24□□□□□ -0.61
PHGDH-212ENST00000641247 PLPP4Q5VZY2 271 aa11.24□□□□□ -0.61
PHGDH-212ENST00000641247 TAF2Q6P1X5 1199 aa11.24□□□□□ -0.61
PHGDH-212ENST00000641247 INPP4AQ96PE3 977 aaPredicted RBP11.24□□□□□ -0.61
PHGDH-212ENST00000641247 CDCA3Q99618 268 aaPredicted RBP11.24□□□□□ -0.61
PHGDH-212ENST00000641247 CWH43Q9H720 699 aa11.24□□□□□ -0.61
PHGDH-212ENST00000641247 HELLSQ9NRZ9 838 aa11.24□□□□□ -0.61
PHGDH-212ENST00000641247 TYW1Q9NV66 732 aaKnown RBP11.24□□□□□ -0.61
PHGDH-212ENST00000641247 TMEM260Q9NX78 707 aa11.24□□□□□ -0.61
PHGDH-212ENST00000641247 PCDHA1Q9Y5I3 950 aa11.24□□□□□ -0.61
PHGDH-212ENST00000641247 SALL3Q9BXA9 1300 aa11.24□□□□□ -0.61
PHGDH-212ENST00000641247 TTC3P53804 2025 aa11.23□□□□□ -0.61
PHGDH-212ENST00000641247 PARP1P09874 1014 aaKnown RBP11.23□□□□□ -0.61
PHGDH-212ENST00000641247 SCG2P13521 617 aa11.23□□□□□ -0.61
PHGDH-212ENST00000641247 MRPS6P82932 125 aaKnown RBP11.23□□□□□ -0.61
PHGDH-212ENST00000641247 UBE3AQ05086 875 aa11.23□□□□□ -0.61
PHGDH-212ENST00000641247 PPFIA1Q13136 1202 aa11.23□□□□□ -0.61
PHGDH-212ENST00000641247 NEDD9Q14511 834 aa11.23□□□□□ -0.61
PHGDH-212ENST00000641247 ASPRV1Q53RT3 343 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms