RNA–Protein interactions for RNA: ENST00000639004.1

FAM49B-230, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 5 BASIC

Gene FAM49B, Length 837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-230ENST00000639004 FAM50AQ14320 339 aaKnown RBP8.49□□□□□ -1.05
FAM49B-230ENST00000639004 CATSPEREQ5SY80 951 aa8.49□□□□□ -1.05
FAM49B-230ENST00000639004 TEPPQ6URK8 271 aa8.49□□□□□ -1.05
FAM49B-230ENST00000639004 NECAB2Q7Z6G3 386 aa8.49□□□□□ -1.05
FAM49B-230ENST00000639004 LDHDQ86WU2 507 aa8.49□□□□□ -1.05
FAM49B-230ENST00000639004 CPA5Q8WXQ8 436 aa8.49□□□□□ -1.05
FAM49B-230ENST00000639004 TOMM22Q9NS69 142 aa8.49□□□□□ -1.05
FAM49B-230ENST00000639004 DDX56Q9NY93 547 aaKnown RBP8.49□□□□□ -1.05
FAM49B-230ENST00000639004 HSPBP1Q9NZL4 362 aa8.49□□□□□ -1.05
FAM49B-230ENST00000639004 RASSF10A6NK89 507 aa8.48□□□□□ -1.05
FAM49B-230ENST00000639004 FOXP2O15409 715 aa8.48□□□□□ -1.05
FAM49B-230ENST00000639004 NCAM1P13591 858 aa8.48□□□□□ -1.05
FAM49B-230ENST00000639004 PTX3P26022 381 aaPredicted RBP8.48□□□□□ -1.05
FAM49B-230ENST00000639004 CDR1P51861 262 aa8.48□□□□□ -1.05
FAM49B-230ENST00000639004 CR1LQ2VPA4 569 aa8.48□□□□□ -1.05
FAM49B-230ENST00000639004 PASD1Q8IV76 773 aa8.48□□□□□ -1.05
FAM49B-230ENST00000639004 FAM26EQ8N5C1 309 aa8.48□□□□□ -1.05
FAM49B-230ENST00000639004 SLC5A5Q92911 643 aa8.48□□□□□ -1.05
FAM49B-230ENST00000639004 SCYL1Q96KG9 808 aa8.48□□□□□ -1.05
FAM49B-230ENST00000639004 RNF38Q9H0F5 515 aa8.48□□□□□ -1.05
FAM49B-230ENST00000639004 SLC5A4Q9NY91 659 aa8.48□□□□□ -1.05
FAM49B-230ENST00000639004 PCDHA5Q9Y5H7 936 aa8.48□□□□□ -1.05
FAM49B-230ENST00000639004 TEX51A0A1B0GUA7 166 aa8.47□□□□□ -1.05
FAM49B-230ENST00000639004 ULK1O75385 1050 aa8.47□□□□□ -1.05
FAM49B-230ENST00000639004 CYP17A1P05093 508 aa8.47□□□□□ -1.05
FAM49B-230ENST00000639004 C8BP07358 591 aa8.47□□□□□ -1.05
FAM49B-230ENST00000639004 MMEP08473 750 aa8.47□□□□□ -1.05
FAM49B-230ENST00000639004 HSP90B1P14625 803 aaKnown RBP8.47□□□□□ -1.05
FAM49B-230ENST00000639004 MC3RP41968 323 aa8.47□□□□□ -1.05
FAM49B-230ENST00000639004 GUCY2FP51841 1108 aa8.47□□□□□ -1.05
FAM49B-230ENST00000639004 NCKAP1LP55160 1127 aa8.47□□□□□ -1.05
FAM49B-230ENST00000639004 HERVK_113P62684 666 aa8.47□□□□□ -1.05
FAM49B-230ENST00000639004 SMAD3P84022 425 aaKnown RBP8.47□□□□□ -1.05
FAM49B-230ENST00000639004 CACNB2Q08289 660 aaPredicted RBP8.47□□□□□ -1.05
FAM49B-230ENST00000639004 SMAD2Q15796 467 aaKnown RBP8.47□□□□□ -1.05
FAM49B-230ENST00000639004 ESRP1Q6NXG1 681 aaKnown RBP8.47□□□□□ -1.05
FAM49B-230ENST00000639004 PROSER1Q86XN7 944 aa8.47□□□□□ -1.05
FAM49B-230ENST00000639004 KRTAP1-3Q8IUG1 177 aa8.47□□□□□ -1.05
FAM49B-230ENST00000639004 COG1Q8WTW3 980 aa8.47□□□□□ -1.05
FAM49B-230ENST00000639004 ZMAT4Q9H898 229 aa8.47□□□□□ -1.05
FAM49B-230ENST00000639004 TYW1Q9NV66 732 aaKnown RBP8.47□□□□□ -1.05
FAM49B-230ENST00000639004 ATF2P15336 505 aa8.46□□□□□ -1.06
FAM49B-230ENST00000639004 FNTBP49356 437 aa8.46□□□□□ -1.06
FAM49B-230ENST00000639004 PHC1P78364 1004 aa8.46□□□□□ -1.06
FAM49B-230ENST00000639004 DBPQ10586 325 aaPredicted RBP8.46□□□□□ -1.06
FAM49B-230ENST00000639004 TERF2Q15554 542 aa8.46□□□□□ -1.06
FAM49B-230ENST00000639004 DDB1Q16531 1140 aa8.46□□□□□ -1.06
FAM49B-230ENST00000639004 BRDTQ58F21 947 aaPredicted RBP8.46□□□□□ -1.06
FAM49B-230ENST00000639004 CD276Q5ZPR3 534 aa8.46□□□□□ -1.06
FAM49B-230ENST00000639004 CD300LDQ6UXZ3 194 aa8.46□□□□□ -1.06
FAM49B-230ENST00000639004 HDGFL2Q7Z4V5 671 aaPredicted RBP8.46□□□□□ -1.06
FAM49B-230ENST00000639004 CLRN3Q8NCR9 226 aa8.46□□□□□ -1.06
FAM49B-230ENST00000639004 ASB15Q8WXK1 588 aa8.46□□□□□ -1.06
FAM49B-230ENST00000639004 SGPP1Q9BX95 441 aa8.46□□□□□ -1.06
FAM49B-230ENST00000639004 NGRNQ9NPE2 291 aaKnown RBP8.46□□□□□ -1.06
FAM49B-230ENST00000639004 WASHC2CQ9Y4E1 1318 aa8.46□□□□□ -1.06
FAM49B-230ENST00000639004 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.45□□□□□ -1.06
FAM49B-230ENST00000639004 SEMA7AO75326 666 aa8.45□□□□□ -1.06
FAM49B-230ENST00000639004 PRKD3O94806 890 aa8.45□□□□□ -1.06
FAM49B-230ENST00000639004 PDGFRBP09619 1106 aa8.45□□□□□ -1.06
FAM49B-230ENST00000639004 AOAHP28039 575 aa8.45□□□□□ -1.06
FAM49B-230ENST00000639004 THBS2P35442 1172 aa8.45□□□□□ -1.06
FAM49B-230ENST00000639004 EPHB3P54753 998 aa8.45□□□□□ -1.06
FAM49B-230ENST00000639004 NKX3-2P78367 333 aa8.45□□□□□ -1.06
FAM49B-230ENST00000639004 TARBP2Q15633 366 aaKnown RBP8.45□□□□□ -1.06
FAM49B-230ENST00000639004 GPR158Q5T848 1215 aa8.45□□□□□ -1.06
FAM49B-230ENST00000639004 BROXQ5VW32 411 aa8.45□□□□□ -1.06
FAM49B-230ENST00000639004 IQSEC1Q6DN90 963 aa8.45□□□□□ -1.06
FAM49B-230ENST00000639004 TMEM132EQ6IEE7 984 aa8.45□□□□□ -1.06
FAM49B-230ENST00000639004 FERMT3Q86UX7 667 aa8.45□□□□□ -1.06
FAM49B-230ENST00000639004 ZC3H18Q86VM9 953 aaKnown RBP8.45□□□□□ -1.06
FAM49B-230ENST00000639004 FBXO15Q8NCQ5 510 aaPredicted RBP8.45□□□□□ -1.06
FAM49B-230ENST00000639004 MZB1Q8WU39 189 aa8.45□□□□□ -1.06
FAM49B-230ENST00000639004 DDX11Q96FC9 970 aa8.45□□□□□ -1.06
FAM49B-230ENST00000639004 C16orf92Q96LL3 132 aa8.45□□□□□ -1.06
FAM49B-230ENST00000639004 TRIM8Q9BZR9 551 aa8.45□□□□□ -1.06
FAM49B-230ENST00000639004 GCM1Q9NP62 436 aa8.45□□□□□ -1.06
FAM49B-230ENST00000639004 BTBD7Q9P203 1132 aa8.45□□□□□ -1.06
FAM49B-230ENST00000639004 RBPJLQ9UBG7 517 aa8.45□□□□□ -1.06
FAM49B-230ENST00000639004 WASF3Q9UPY6 502 aa8.45□□□□□ -1.06
FAM49B-230ENST00000639004 KATNA1O75449 491 aa8.44□□□□□ -1.06
FAM49B-230ENST00000639004 PFKLP17858 780 aa8.44□□□□□ -1.06
FAM49B-230ENST00000639004 IGFBP6P24592 240 aaPredicted RBP8.44□□□□□ -1.06
FAM49B-230ENST00000639004 SESN3P58005 492 aa8.44□□□□□ -1.06
FAM49B-230ENST00000639004 EPHA7Q15375 998 aa8.44□□□□□ -1.06
FAM49B-230ENST00000639004 MCTP1Q6DN14 999 aa8.44□□□□□ -1.06
FAM49B-230ENST00000639004 IGDCC3Q8IVU1 814 aa8.44□□□□□ -1.06
FAM49B-230ENST00000639004 ZNF610Q8N9Z0 462 aa8.44□□□□□ -1.06
FAM49B-230ENST00000639004 GBP4Q96PP9 640 aa8.44□□□□□ -1.06
FAM49B-230ENST00000639004 PUS7LQ9H0K6 701 aaKnown RBP8.44□□□□□ -1.06
FAM49B-230ENST00000639004 MS4A5Q9H3V2 200 aa8.44□□□□□ -1.06
FAM49B-230ENST00000639004 VTA1Q9NP79 307 aa8.44□□□□□ -1.06
FAM49B-230ENST00000639004 RAB11FIP3O75154 756 aa8.43□□□□□ -1.06
FAM49B-230ENST00000639004 LSP1P33241 339 aa8.43□□□□□ -1.06
FAM49B-230ENST00000639004 MTMR1Q13613 665 aa8.43□□□□□ -1.06
FAM49B-230ENST00000639004 LRRC32Q14392 662 aa8.43□□□□□ -1.06
FAM49B-230ENST00000639004 LIPIQ6XZB0 460 aa8.43□□□□□ -1.06
FAM49B-230ENST00000639004 B3GNT8Q7Z7M8 397 aa8.43□□□□□ -1.06
FAM49B-230ENST00000639004 RTN4RL1Q86UN2 441 aaPredicted RBP8.43□□□□□ -1.06
FAM49B-230ENST00000639004 ZZZ3Q8IYH5 903 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms