RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 PLCB4Q15147 1175 aa22.67■■□□□ 1.22
SSBP4-210ENST00000601444 MFSD5Q6N075 450 aa22.67■■□□□ 1.22
SSBP4-210ENST00000601444 B3GNT9Q6UX72 402 aa22.67■■□□□ 1.22
SSBP4-210ENST00000601444 PLPPR4Q7Z2D5 763 aa22.67■■□□□ 1.22
SSBP4-210ENST00000601444 SMAP1Q8IYB5 467 aaPredicted RBP22.67■■□□□ 1.22
SSBP4-210ENST00000601444 NAP1L4Q99733 375 aaKnown RBP22.67■■□□□ 1.22
SSBP4-210ENST00000601444 UBE2OQ9C0C9 1292 aaKnown RBP22.67■■□□□ 1.22
SSBP4-210ENST00000601444 ZNF302Q9NR11 478 aa22.67■■□□□ 1.22
SSBP4-210ENST00000601444 DISC1Q9NRI5 854 aa22.67■■□□□ 1.22
SSBP4-210ENST00000601444 PCDHA10Q9Y5I2 948 aa22.67■■□□□ 1.22
SSBP4-210ENST00000601444 CEP290O15078 2479 aa22.66■■□□□ 1.22
SSBP4-210ENST00000601444 LARP1BQ659C4 914 aaKnown RBP22.66■■□□□ 1.22
SSBP4-210ENST00000601444 MCTP1Q6DN14 999 aa22.66■■□□□ 1.22
SSBP4-210ENST00000601444 LMBR1Q8WVP7 490 aa22.66■■□□□ 1.22
SSBP4-210ENST00000601444 ATP6V0A1Q93050 837 aa22.66■■□□□ 1.22
SSBP4-210ENST00000601444 ZBTB10Q96DT7 871 aa22.66■■□□□ 1.22
SSBP4-210ENST00000601444 SCLYQ96I15 445 aa22.66■■□□□ 1.22
SSBP4-210ENST00000601444 TCEAL9Q9UHQ7 104 aa22.66■■□□□ 1.22
SSBP4-210ENST00000601444 WDR64B1ANS9 1081 aa22.65■■□□□ 1.22
SSBP4-210ENST00000601444 H3BQV1 296 aa22.65■■□□□ 1.22
SSBP4-210ENST00000601444 PSAPP07602 524 aa22.65■■□□□ 1.22
SSBP4-210ENST00000601444 CSF2RAP15509 400 aa22.65■■□□□ 1.22
SSBP4-210ENST00000601444 MCM7P33993 719 aa22.65■■□□□ 1.22
SSBP4-210ENST00000601444 BMP8BP34820 402 aa22.65■■□□□ 1.22
SSBP4-210ENST00000601444 ADAM17P78536 824 aa22.65■■□□□ 1.22
SSBP4-210ENST00000601444 NBR1Q14596 966 aa22.65■■□□□ 1.22
SSBP4-210ENST00000601444 PDXDC2PQ6P474 469 aa22.65■■□□□ 1.22
SSBP4-210ENST00000601444 TRMT1LQ7Z2T5 733 aaKnown RBP22.65■■□□□ 1.22
SSBP4-210ENST00000601444 AFAP1L1Q8TED9 768 aa22.65■■□□□ 1.22
SSBP4-210ENST00000601444 FAM20AQ96MK3 541 aa22.65■■□□□ 1.22
SSBP4-210ENST00000601444 GABBR1Q9UBS5 961 aa22.65■■□□□ 1.22
SSBP4-210ENST00000601444 VAV3Q9UKW4 847 aa22.65■■□□□ 1.22
SSBP4-210ENST00000601444 RANBP2P49792 3224 aaKnown RBP22.65■■□□□ 1.22
SSBP4-210ENST00000601444 NRCAMQ92823 1304 aa22.64■■□□□ 1.22
SSBP4-210ENST00000601444 EML1O00423 815 aa22.64■■□□□ 1.21
SSBP4-210ENST00000601444 TBX3O15119 743 aa22.64■■□□□ 1.21
SSBP4-210ENST00000601444 INSRRP14616 1297 aa22.64■■□□□ 1.21
SSBP4-210ENST00000601444 TOB1P50616 345 aaPredicted RBP22.64■■□□□ 1.21
SSBP4-210ENST00000601444 IGBP1P78318 339 aa22.64■■□□□ 1.21
SSBP4-210ENST00000601444 FPGSQ05932 587 aa22.64■■□□□ 1.21
SSBP4-210ENST00000601444 PPFIA1Q13136 1202 aa22.64■■□□□ 1.21
SSBP4-210ENST00000601444 PTK7Q13308 1070 aa22.64■■□□□ 1.21
SSBP4-210ENST00000601444 ZNF174Q15697 407 aa22.64■■□□□ 1.21
SSBP4-210ENST00000601444 GRIK4Q16099 956 aa22.64■■□□□ 1.21
SSBP4-210ENST00000601444 UGCGQ16739 394 aa22.64■■□□□ 1.21
SSBP4-210ENST00000601444 FAM160B1Q5W0V3 765 aa22.64■■□□□ 1.21
SSBP4-210ENST00000601444 MIER3Q7Z3K6 550 aa22.64■■□□□ 1.21
SSBP4-210ENST00000601444 TRAPPC12Q8WVT3 735 aa22.64■■□□□ 1.21
SSBP4-210ENST00000601444 TMEM60Q9H2L4 133 aa22.64■■□□□ 1.21
SSBP4-210ENST00000601444 TRPC6Q9Y210 931 aa22.64■■□□□ 1.21
SSBP4-210ENST00000601444 MAFBQ9Y5Q3 323 aaPredicted RBP22.64■■□□□ 1.21
SSBP4-210ENST00000601444 POTEB3A0JP26 581 aa22.63■■□□□ 1.21
SSBP4-210ENST00000601444 MARCH6O60337 910 aa22.63■■□□□ 1.21
SSBP4-210ENST00000601444 NEMFO60524 1076 aa22.63■■□□□ 1.21
SSBP4-210ENST00000601444 CALCRLQ16602 461 aa22.63■■□□□ 1.21
SSBP4-210ENST00000601444 TRIM71Q2Q1W2 868 aaKnown RBP22.63■■□□□ 1.21
SSBP4-210ENST00000601444 MARCH8Q5T0T0 291 aa22.63■■□□□ 1.21
SSBP4-210ENST00000601444 POTEBQ6S5H4 581 aa22.63■■□□□ 1.21
SSBP4-210ENST00000601444 C16orf59Q7L2K0 433 aa22.63■■□□□ 1.21
SSBP4-210ENST00000601444 SERINC5Q86VE9 423 aa22.63■■□□□ 1.21
SSBP4-210ENST00000601444 TMEM199Q8N511 208 aa22.63■■□□□ 1.21
SSBP4-210ENST00000601444 INTS4Q96HW7 963 aaKnown RBP22.63■■□□□ 1.21
SSBP4-210ENST00000601444 ACRP10323 421 aa22.62■■□□□ 1.21
SSBP4-210ENST00000601444 SFNP31947 248 aa22.62■■□□□ 1.21
SSBP4-210ENST00000601444 JAK3P52333 1124 aa22.62■■□□□ 1.21
SSBP4-210ENST00000601444 PPP2R5CQ13362 524 aa22.62■■□□□ 1.21
SSBP4-210ENST00000601444 TTC38Q5R3I4 469 aa22.62■■□□□ 1.21
SSBP4-210ENST00000601444 C9orf50Q5SZB4 431 aa22.62■■□□□ 1.21
SSBP4-210ENST00000601444 RUFY4Q6ZNE9 571 aa22.62■■□□□ 1.21
SSBP4-210ENST00000601444 HSCBQ8IWL3 235 aa22.62■■□□□ 1.21
SSBP4-210ENST00000601444 VWCEQ96DN2 955 aa22.62■■□□□ 1.21
SSBP4-210ENST00000601444 MTMR9Q96QG7 549 aa22.62■■□□□ 1.21
SSBP4-210ENST00000601444 PITPNM1O00562 1244 aa22.61■■□□□ 1.21
SSBP4-210ENST00000601444 ZNF862O60290 1169 aa22.61■■□□□ 1.21
SSBP4-210ENST00000601444 BAG4O95429 457 aaKnown RBP22.61■■□□□ 1.21
SSBP4-210ENST00000601444 IQCF3P0C7M6 154 aa22.61■■□□□ 1.21
SSBP4-210ENST00000601444 GNAT1P11488 350 aa22.61■■□□□ 1.21
SSBP4-210ENST00000601444 CKBP12277 381 aa22.61■■□□□ 1.21
SSBP4-210ENST00000601444 SLC26A2P50443 739 aa22.61■■□□□ 1.21
SSBP4-210ENST00000601444 SPIRE1Q08AE8 756 aa22.61■■□□□ 1.21
SSBP4-210ENST00000601444 BFSP2Q13515 415 aa22.61■■□□□ 1.21
SSBP4-210ENST00000601444 CKAP2LQ8IYA6 745 aa22.61■■□□□ 1.21
SSBP4-210ENST00000601444 SLFN12Q8IYM2 578 aa22.61■■□□□ 1.21
SSBP4-210ENST00000601444 ATP8B4Q8TF62 1192 aa22.61■■□□□ 1.21
SSBP4-210ENST00000601444 IGSF9BQ9UPX0 1349 aa22.6■■□□□ 1.21
SSBP4-210ENST00000601444 TXKP42681 527 aa22.6■■□□□ 1.21
SSBP4-210ENST00000601444 SHHQ15465 462 aa22.6■■□□□ 1.21
SSBP4-210ENST00000601444 ZNF618Q5T7W0 954 aa22.6■■□□□ 1.21
SSBP4-210ENST00000601444 RETREG2Q8NC44 543 aa22.6■■□□□ 1.21
SSBP4-210ENST00000601444 BANK1Q8NDB2 785 aa22.6■■□□□ 1.21
SSBP4-210ENST00000601444 RDM1Q8NG50 284 aa22.6■■□□□ 1.21
SSBP4-210ENST00000601444 CAGE1Q8TC20 777 aa22.6■■□□□ 1.21
SSBP4-210ENST00000601444 NOL7Q9UMY1 257 aaKnown RBP22.6■■□□□ 1.21
SSBP4-210ENST00000601444 PCDHA12Q9UN75 941 aa22.6■■□□□ 1.21
SSBP4-210ENST00000601444 PCDHB6Q9Y5E3 794 aa22.6■■□□□ 1.21
SSBP4-210ENST00000601444 TRIP12Q14669 1992 aaPredicted RBP22.59■■□□□ 1.21
SSBP4-210ENST00000601444 MBLAC1A4D2B0 266 aaPredicted RBP22.59■■□□□ 1.21
SSBP4-210ENST00000601444 ZBTB42B2RXF5 422 aa22.59■■□□□ 1.21
SSBP4-210ENST00000601444 HBP1O60381 514 aa22.59■■□□□ 1.21
SSBP4-210ENST00000601444 THPOP40225 353 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 344.2 ms