RNA–Protein interactions for RNA: ENST00000594814.5

LRIT3-202, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRIT3, Length 3,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-202ENST00000594814 ZNF34Q8IZ26 560 aa4.79□□□□□ -1.64
LRIT3-202ENST00000594814 ARL6IP6Q8N6S5 226 aa4.79□□□□□ -1.64
LRIT3-202ENST00000594814 OPTNQ96CV9 577 aa4.79□□□□□ -1.64
LRIT3-202ENST00000594814 EDC3Q96F86 508 aaKnown RBP4.79□□□□□ -1.64
LRIT3-202ENST00000594814 RBM17Q96I25 401 aaKnown RBP4.79□□□□□ -1.64
LRIT3-202ENST00000594814 ATP6V1G3Q96LB4 118 aa4.79□□□□□ -1.64
LRIT3-202ENST00000594814 CCT8L2Q96SF2 557 aa4.79□□□□□ -1.64
LRIT3-202ENST00000594814 NTPCRQ9BSD7 190 aaKnown RBP4.79□□□□□ -1.64
LRIT3-202ENST00000594814 FAM129AQ9BZQ8 928 aa4.79□□□□□ -1.64
LRIT3-202ENST00000594814 KANSL2Q9H9L4 492 aa4.79□□□□□ -1.64
LRIT3-202ENST00000594814 SEC31BQ9NQW1 1179 aa4.79□□□□□ -1.64
LRIT3-202ENST00000594814 EXOC1Q9NV70 894 aa4.79□□□□□ -1.64
LRIT3-202ENST00000594814 SAR1BQ9Y6B6 198 aa4.79□□□□□ -1.64
LRIT3-202ENST00000594814 TAF1LQ8IZX4 1826 aa4.79□□□□□ -1.64
LRIT3-202ENST00000594814 GOLGA8AA7E2F4 631 aa4.79□□□□□ -1.64
LRIT3-202ENST00000594814 PPIP5K2O43314 1243 aa4.79□□□□□ -1.64
LRIT3-202ENST00000594814 TRAPPC3O43617 180 aa4.79□□□□□ -1.64
LRIT3-202ENST00000594814 ZBED4O75132 1171 aa4.79□□□□□ -1.64
LRIT3-202ENST00000594814 ALDH1L1O75891 902 aa4.79□□□□□ -1.64
LRIT3-202ENST00000594814 APBB3O95704 486 aa4.79□□□□□ -1.64
LRIT3-202ENST00000594814 ATP4AP20648 1035 aa4.79□□□□□ -1.64
LRIT3-202ENST00000594814 RPL13P26373 211 aaKnown RBP4.79□□□□□ -1.64
LRIT3-202ENST00000594814 SCTRP47872 440 aa4.79□□□□□ -1.64
LRIT3-202ENST00000594814 PHEXP78562 749 aa4.79□□□□□ -1.64
LRIT3-202ENST00000594814 TCIRG1Q13488 830 aa4.79□□□□□ -1.64
LRIT3-202ENST00000594814 MTX1Q13505 466 aa4.79□□□□□ -1.64
LRIT3-202ENST00000594814 KCNB1Q14721 858 aa4.79□□□□□ -1.64
LRIT3-202ENST00000594814 TAF11Q15544 211 aa4.79□□□□□ -1.64
LRIT3-202ENST00000594814 CLUL1Q15846 466 aa4.79□□□□□ -1.64
LRIT3-202ENST00000594814 ATG9AQ7Z3C6 839 aa4.79□□□□□ -1.64
LRIT3-202ENST00000594814 PASD1Q8IV76 773 aa4.79□□□□□ -1.64
LRIT3-202ENST00000594814 ITPKCQ96DU7 683 aa4.79□□□□□ -1.64
LRIT3-202ENST00000594814 ZNF274Q96GC6 653 aaPredicted RBP4.79□□□□□ -1.64
LRIT3-202ENST00000594814 CLIC6Q96NY7 704 aa4.79□□□□□ -1.64
LRIT3-202ENST00000594814 PLVAPQ9BX97 442 aa4.79□□□□□ -1.64
LRIT3-202ENST00000594814 STMN4Q9H169 189 aaPredicted RBP4.79□□□□□ -1.64
LRIT3-202ENST00000594814 CCDC87Q9NVE4 849 aa4.79□□□□□ -1.64
LRIT3-202ENST00000594814 CCNL1Q9UK58 526 aaPredicted RBP4.79□□□□□ -1.64
LRIT3-202ENST00000594814 IPPQ9Y573 584 aa4.79□□□□□ -1.64
LRIT3-202ENST00000594814 C9IYK1 514 aa4.78□□□□□ -1.64
LRIT3-202ENST00000594814 GNPATO15228 680 aa4.78□□□□□ -1.64
LRIT3-202ENST00000594814 N4BP1O75113 896 aaKnown RBP4.78□□□□□ -1.64
LRIT3-202ENST00000594814 TROVE2P10155 538 aaKnown RBP eCLIP4.78□□□□□ -1.64
LRIT3-202ENST00000594814 BCRP11274 1271 aa4.78□□□□□ -1.64
LRIT3-202ENST00000594814 NR1D1P20393 614 aa4.78□□□□□ -1.64
LRIT3-202ENST00000594814 PBX1P40424 430 aa4.78□□□□□ -1.64
LRIT3-202ENST00000594814 UBA7P41226 1012 aa4.78□□□□□ -1.64
LRIT3-202ENST00000594814 ECE1P42892 770 aa4.78□□□□□ -1.64
LRIT3-202ENST00000594814 CDKN1CP49918 316 aaPredicted RBP4.78□□□□□ -1.64
LRIT3-202ENST00000594814 LACTBP83111 547 aaPredicted RBP4.78□□□□□ -1.64
LRIT3-202ENST00000594814 NR1I3Q14994 352 aa4.78□□□□□ -1.64
LRIT3-202ENST00000594814 LMBR1LQ6UX01 489 aa4.78□□□□□ -1.64
LRIT3-202ENST00000594814 LURAP1LQ8IV03 231 aa4.78□□□□□ -1.64
LRIT3-202ENST00000594814 MYOCDQ8IZQ8 938 aa4.78□□□□□ -1.64
LRIT3-202ENST00000594814 PPP1R14CQ8TAE6 165 aa4.78□□□□□ -1.64
LRIT3-202ENST00000594814 PIP4K2CQ8TBX8 421 aa4.78□□□□□ -1.64
LRIT3-202ENST00000594814 PI4K2BQ8TCG2 481 aa4.78□□□□□ -1.64
LRIT3-202ENST00000594814 NSMCE1Q8WV22 266 aa4.78□□□□□ -1.64
LRIT3-202ENST00000594814 ZNF653Q96CK0 615 aa4.78□□□□□ -1.64
LRIT3-202ENST00000594814 LRRC45Q96CN5 670 aa4.78□□□□□ -1.64
LRIT3-202ENST00000594814 CYFIP2Q96F07 1278 aa4.78□□□□□ -1.64
LRIT3-202ENST00000594814 C8orf76Q96K31 380 aa4.78□□□□□ -1.64
LRIT3-202ENST00000594814 OLFM3Q96PB7 478 aa4.78□□□□□ -1.64
LRIT3-202ENST00000594814 KRT23Q9C075 422 aa4.78□□□□□ -1.64
LRIT3-202ENST00000594814 NDST4Q9H3R1 872 aa4.78□□□□□ -1.64
LRIT3-202ENST00000594814 PLCB1Q9NQ66 1216 aa4.78□□□□□ -1.64
LRIT3-202ENST00000594814 PNMA8BQ9ULN7 279 aaPredicted RBP4.78□□□□□ -1.64
LRIT3-202ENST00000594814 HPSEQ9Y251 543 aa4.78□□□□□ -1.64
LRIT3-202ENST00000594814 COMMD3-BMI1R4GMX3 469 aa4.78□□□□□ -1.64
LRIT3-202ENST00000594814 MED23Q9ULK4 1368 aa4.78□□□□□ -1.64
LRIT3-202ENST00000594814 SALL1Q9NSC2 1324 aa4.78□□□□□ -1.64
LRIT3-202ENST00000594814 SPTLC2O15270 562 aa4.78□□□□□ -1.64
LRIT3-202ENST00000594814 FANCGO15287 622 aa4.78□□□□□ -1.64
LRIT3-202ENST00000594814 KRT86O43790 486 aa4.78□□□□□ -1.64
LRIT3-202ENST00000594814 MFAP3LO75121 409 aa4.78□□□□□ -1.64
LRIT3-202ENST00000594814 SLC34A2O95436 690 aa4.78□□□□□ -1.64
LRIT3-202ENST00000594814 UBTFL1P0CB47 393 aaPredicted RBP4.78□□□□□ -1.64
LRIT3-202ENST00000594814 MARSP56192 900 aaKnown RBP4.78□□□□□ -1.64
LRIT3-202ENST00000594814 ATP11AP98196 1134 aa4.78□□□□□ -1.64
LRIT3-202ENST00000594814 PARP6Q2NL67 630 aa4.78□□□□□ -1.64
LRIT3-202ENST00000594814 ZMYM1Q5SVZ6 1142 aa4.78□□□□□ -1.64
LRIT3-202ENST00000594814 UNC5DQ6UXZ4 953 aa4.78□□□□□ -1.64
LRIT3-202ENST00000594814 ZNF579Q8NAF0 562 aaKnown RBP4.78□□□□□ -1.64
LRIT3-202ENST00000594814 CCT6BQ92526 530 aa4.78□□□□□ -1.64
LRIT3-202ENST00000594814 EAF2Q96CJ1 260 aaPredicted RBP4.78□□□□□ -1.64
LRIT3-202ENST00000594814 IRX2Q9BZI1 471 aaPredicted RBP4.78□□□□□ -1.64
LRIT3-202ENST00000594814 EPB41L1Q9H4G0 881 aa4.78□□□□□ -1.64
LRIT3-202ENST00000594814 GREM2Q9H772 168 aa4.78□□□□□ -1.64
LRIT3-202ENST00000594814 PCDH18Q9HCL0 1135 aa4.78□□□□□ -1.64
LRIT3-202ENST00000594814 DKK3Q9UBP4 350 aa4.78□□□□□ -1.64
LRIT3-202ENST00000594814 NUP98P52948 1817 aa4.78□□□□□ -1.64
LRIT3-202ENST00000594814 CEP350Q5VT06 3117 aa4.78□□□□□ -1.64
LRIT3-202ENST00000594814 AFDNP55196 1824 aaKnown RBP4.78□□□□□ -1.64
LRIT3-202ENST00000594814 BPNT1O95861 308 aa4.78□□□□□ -1.64
LRIT3-202ENST00000594814 TPP2P29144 1249 aaPredicted RBP4.78□□□□□ -1.64
LRIT3-202ENST00000594814 GJA8P48165 433 aa4.78□□□□□ -1.64
LRIT3-202ENST00000594814 PDE4BQ07343 736 aa4.78□□□□□ -1.64
LRIT3-202ENST00000594814 CUL1Q13616 776 aa4.78□□□□□ -1.64
LRIT3-202ENST00000594814 KPNB1Q14974 876 aaKnown RBP4.78□□□□□ -1.64
LRIT3-202ENST00000594814 CLPPQ16740 277 aaPredicted RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms