RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 IQCEQ6IPM2 695 aa21.11■□□□□ 0.97
PRKCSH-209ENST00000589838 OTOP1Q7RTM1 612 aa21.11■□□□□ 0.97
PRKCSH-209ENST00000589838 NIM1KQ8IY84 436 aa21.11■□□□□ 0.97
PRKCSH-209ENST00000589838 CYP2W1Q8TAV3 490 aa21.11■□□□□ 0.97
PRKCSH-209ENST00000589838 SLC5A5Q92911 643 aa21.11■□□□□ 0.97
PRKCSH-209ENST00000589838 ALS2CR12Q96Q35 445 aa21.11■□□□□ 0.97
PRKCSH-209ENST00000589838 BHMT2Q9H2M3 363 aa21.11■□□□□ 0.97
PRKCSH-209ENST00000589838 TFR2Q9UP52 801 aa21.11■□□□□ 0.97
PRKCSH-209ENST00000589838 MACROD2A1Z1Q3 448 aa21.11■□□□□ 0.97
PRKCSH-209ENST00000589838 CYP4A11Q02928 519 aa21.11■□□□□ 0.97
PRKCSH-209ENST00000589838 LONRF2Q1L5Z9 754 aa21.11■□□□□ 0.97
PRKCSH-209ENST00000589838 KRT26Q7Z3Y9 468 aa21.11■□□□□ 0.97
PRKCSH-209ENST00000589838 HSD17B14Q9BPX1 270 aa21.11■□□□□ 0.97
PRKCSH-209ENST00000589838 WDR11Q9BZH6 1224 aa21.11■□□□□ 0.97
PRKCSH-209ENST00000589838 METTL14Q9HCE5 456 aaKnown RBP21.11■□□□□ 0.97
PRKCSH-209ENST00000589838 ZNF277Q9NRM2 450 aaPredicted RBP21.11■□□□□ 0.97
PRKCSH-209ENST00000589838 TYW1Q9NV66 732 aaKnown RBP21.11■□□□□ 0.97
PRKCSH-209ENST00000589838 ARMCX3Q9UH62 379 aaPredicted RBP21.11■□□□□ 0.97
PRKCSH-209ENST00000589838 PSMD10O75832 226 aa21.1■□□□□ 0.97
PRKCSH-209ENST00000589838 TAL1P17542 331 aaPredicted RBP21.1■□□□□ 0.97
PRKCSH-209ENST00000589838 SETQ01105 290 aaPredicted RBP21.1■□□□□ 0.97
PRKCSH-209ENST00000589838 OLFML3Q9NRN5 406 aa21.1■□□□□ 0.97
PRKCSH-209ENST00000589838 SMCHD1A6NHR9 2005 aa21.1■□□□□ 0.97
PRKCSH-209ENST00000589838 EML1O00423 815 aa21.09■□□□□ 0.97
PRKCSH-209ENST00000589838 SLC16A3O15427 465 aaKnown RBP21.09■□□□□ 0.97
PRKCSH-209ENST00000589838 NOL4O94818 638 aa21.09■□□□□ 0.97
PRKCSH-209ENST00000589838 ASNSP08243 561 aa21.09■□□□□ 0.97
PRKCSH-209ENST00000589838 PRLRP16471 622 aa21.09■□□□□ 0.97
PRKCSH-209ENST00000589838 ERCC3P19447 782 aa21.09■□□□□ 0.97
PRKCSH-209ENST00000589838 PRELPP51888 382 aa21.09■□□□□ 0.97
PRKCSH-209ENST00000589838 KCNH2Q12809 1159 aa21.09■□□□□ 0.97
PRKCSH-209ENST00000589838 ASTE1Q2TB18 679 aaPredicted RBP21.09■□□□□ 0.97
PRKCSH-209ENST00000589838 CEP55Q53EZ4 464 aa21.09■□□□□ 0.97
PRKCSH-209ENST00000589838 CCDC155Q8N6L0 562 aa21.09■□□□□ 0.97
PRKCSH-209ENST00000589838 WDR18Q9BV38 432 aa21.09■□□□□ 0.97
PRKCSH-209ENST00000589838 FUT8Q9BYC5 575 aa21.09■□□□□ 0.97
PRKCSH-209ENST00000589838 NLRC4Q9NPP4 1024 aa21.09■□□□□ 0.97
PRKCSH-209ENST00000589838 HDAC6Q9UBN7 1215 aa21.09■□□□□ 0.97
PRKCSH-209ENST00000589838 RBAK-RBAKDNI3L0D1 243 aa21.09■□□□□ 0.97
PRKCSH-209ENST00000589838 EIF3DO15371 548 aaKnown RBP eCLIP21.09■□□□□ 0.97
PRKCSH-209ENST00000589838 GAS7O60861 476 aa21.09■□□□□ 0.97
PRKCSH-209ENST00000589838 FAM13AO94988 1023 aa21.09■□□□□ 0.97
PRKCSH-209ENST00000589838 RHOXF2BP0C7M4 288 aa21.09■□□□□ 0.97
PRKCSH-209ENST00000589838 POLR2FP61218 127 aaKnown RBP21.09■□□□□ 0.97
PRKCSH-209ENST00000589838 TDRD12Q587J7 1177 aaKnown RBP21.09■□□□□ 0.97
PRKCSH-209ENST00000589838 RINT1Q6NUQ1 792 aa21.09■□□□□ 0.97
PRKCSH-209ENST00000589838 RNF10Q8N5U6 811 aaKnown RBP21.09■□□□□ 0.97
PRKCSH-209ENST00000589838 RHOXF2Q9BQY4 288 aa21.09■□□□□ 0.97
PRKCSH-209ENST00000589838 TMEM39BQ9GZU3 492 aa21.09■□□□□ 0.97
PRKCSH-209ENST00000589838 DEFB129Q9H1M3 183 aa21.09■□□□□ 0.97
PRKCSH-209ENST00000589838 RGL1Q9NZL6 768 aa21.09■□□□□ 0.97
PRKCSH-209ENST00000589838 ZBTB12Q9Y330 459 aaPredicted RBP21.09■□□□□ 0.97
PRKCSH-209ENST00000589838 DUSP10Q9Y6W6 482 aa21.09■□□□□ 0.97
PRKCSH-209ENST00000589838 CASP5P51878 434 aa21.08■□□□□ 0.97
PRKCSH-209ENST00000589838 MAP3K10Q02779 954 aa21.08■□□□□ 0.97
PRKCSH-209ENST00000589838 HGSNATQ68CP4 663 aa21.08■□□□□ 0.97
PRKCSH-209ENST00000589838 WDR93Q6P2C0 686 aa21.08■□□□□ 0.97
PRKCSH-209ENST00000589838 HDXQ7Z353 690 aa21.08■□□□□ 0.97
PRKCSH-209ENST00000589838 LDHDQ86WU2 507 aa21.08■□□□□ 0.97
PRKCSH-209ENST00000589838 TPH2Q8IWU9 490 aa21.08■□□□□ 0.97
PRKCSH-209ENST00000589838 CAGE1Q8TC20 777 aa21.08■□□□□ 0.97
PRKCSH-209ENST00000589838 TBC1D5Q92609 795 aa21.08■□□□□ 0.97
PRKCSH-209ENST00000589838 NACC1Q96RE7 527 aa21.08■□□□□ 0.97
PRKCSH-209ENST00000589838 PNKPQ96T60 521 aa21.08■□□□□ 0.97
PRKCSH-209ENST00000589838 RUSC1Q9BVN2 902 aa21.08■□□□□ 0.97
PRKCSH-209ENST00000589838 PLCB1Q9NQ66 1216 aa21.08■□□□□ 0.97
PRKCSH-209ENST00000589838 JADE2Q9NQC1 790 aa21.08■□□□□ 0.97
PRKCSH-209ENST00000589838 AIPL1Q9NZN9 384 aa21.08■□□□□ 0.97
PRKCSH-209ENST00000589838 KCND2Q9NZV8 630 aa21.08■□□□□ 0.97
PRKCSH-209ENST00000589838 SEL1LQ9UBV2 794 aa21.08■□□□□ 0.97
PRKCSH-209ENST00000589838 LOXHD1Q8IVV2 1947 aa21.08■□□□□ 0.96
PRKCSH-209ENST00000589838 PRPF6O94906 941 aaKnown RBP21.07■□□□□ 0.96
PRKCSH-209ENST00000589838 SLITRK3O94933 977 aa21.07■□□□□ 0.96
PRKCSH-209ENST00000589838 AFPP02771 609 aaKnown RBP21.07■□□□□ 0.96
PRKCSH-209ENST00000589838 EPB41P11171 864 aaKnown RBP21.07■□□□□ 0.96
PRKCSH-209ENST00000589838 GPS2Q13227 327 aa21.07■□□□□ 0.96
PRKCSH-209ENST00000589838 STXBP4Q6ZWJ1 553 aa21.07■□□□□ 0.96
PRKCSH-209ENST00000589838 MSL3Q8N5Y2 521 aaKnown RBP21.07■□□□□ 0.96
PRKCSH-209ENST00000589838 DYDC2Q96IM9 177 aa21.07■□□□□ 0.96
PRKCSH-209ENST00000589838 GCNT3O95395 438 aa21.07■□□□□ 0.96
PRKCSH-209ENST00000589838 MYBP10242 640 aa21.07■□□□□ 0.96
PRKCSH-209ENST00000589838 XRCC5P13010 732 aaKnown RBP21.07■□□□□ 0.96
PRKCSH-209ENST00000589838 DPEP1P16444 411 aa21.07■□□□□ 0.96
PRKCSH-209ENST00000589838 USP14P54578 494 aa21.07■□□□□ 0.96
PRKCSH-209ENST00000589838 CTTNQ14247 550 aaKnown RBP21.07■□□□□ 0.96
PRKCSH-209ENST00000589838 EPHA7Q15375 998 aa21.07■□□□□ 0.96
PRKCSH-209ENST00000589838 TERF2Q15554 542 aa21.07■□□□□ 0.96
PRKCSH-209ENST00000589838 BEND6Q5SZJ8 279 aaPredicted RBP21.07■□□□□ 0.96
PRKCSH-209ENST00000589838 TEKT3Q9BXF9 490 aa21.07■□□□□ 0.96
PRKCSH-209ENST00000589838 SNX12Q9UMY4 172 aa21.07■□□□□ 0.96
PRKCSH-209ENST00000589838 UBE4BO95155 1302 aa21.06■□□□□ 0.96
PRKCSH-209ENST00000589838 TARSL2A2RTX5 802 aaKnown RBP21.06■□□□□ 0.96
PRKCSH-209ENST00000589838 SASH3O75995 380 aa21.06■□□□□ 0.96
PRKCSH-209ENST00000589838 TFRCP02786 760 aaKnown RBP21.06■□□□□ 0.96
PRKCSH-209ENST00000589838 NR3C1P04150 777 aa21.06■□□□□ 0.96
PRKCSH-209ENST00000589838 ZYXQ15942 572 aaKnown RBP21.06■□□□□ 0.96
PRKCSH-209ENST00000589838 NFIL3Q16649 462 aa21.06■□□□□ 0.96
PRKCSH-209ENST00000589838 CCDC70Q6NSX1 233 aa21.06■□□□□ 0.96
PRKCSH-209ENST00000589838 MIGA2Q7L4E1 593 aa21.06■□□□□ 0.96
PRKCSH-209ENST00000589838 NOA1Q8NC60 698 aaKnown RBP21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms