RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 SH3GLB2Q9NR46 395 aa11.84□□□□□ -0.51
SDF2-208ENST00000589788 TMEM260Q9NX78 707 aa11.84□□□□□ -0.51
SDF2-208ENST00000589788 TRIM43BA6NCK2 446 aa11.83□□□□□ -0.52
SDF2-208ENST00000589788 NOP56O00567 594 aaKnown RBP11.83□□□□□ -0.52
SDF2-208ENST00000589788 KIAA0355O15063 1070 aa11.83□□□□□ -0.52
SDF2-208ENST00000589788 ZNF76P36508 570 aa11.83□□□□□ -0.52
SDF2-208ENST00000589788 NLRP5P59047 1200 aa11.83□□□□□ -0.52
SDF2-208ENST00000589788 SP2Q02086 613 aa11.83□□□□□ -0.52
SDF2-208ENST00000589788 SCRN1Q12765 414 aa11.83□□□□□ -0.52
SDF2-208ENST00000589788 MTMR1Q13613 665 aa11.83□□□□□ -0.52
SDF2-208ENST00000589788 NBPF20Q3BBV1 942 aa11.83□□□□□ -0.52
SDF2-208ENST00000589788 HABP4Q5JVS0 413 aaKnown RBP11.83□□□□□ -0.52
SDF2-208ENST00000589788 FAM126BQ8IXS8 530 aa11.83□□□□□ -0.52
SDF2-208ENST00000589788 REXO1Q8N1G1 1221 aaKnown RBP11.83□□□□□ -0.52
SDF2-208ENST00000589788 SLC43A3Q8NBI5 491 aa11.83□□□□□ -0.52
SDF2-208ENST00000589788 GIMAP8Q8ND71 665 aaPredicted RBP11.83□□□□□ -0.52
SDF2-208ENST00000589788 TRIM43Q96BQ3 446 aaPredicted RBP11.83□□□□□ -0.52
SDF2-208ENST00000589788 GDF15Q99988 308 aa11.83□□□□□ -0.52
SDF2-208ENST00000589788 USB1Q9BQ65 265 aaKnown RBP11.83□□□□□ -0.52
SDF2-208ENST00000589788 C22orf23Q9BZE7 217 aa11.83□□□□□ -0.52
SDF2-208ENST00000589788 VPS54Q9P1Q0 977 aa11.83□□□□□ -0.52
SDF2-208ENST00000589788 PCDH10Q9P2E7 1040 aa11.83□□□□□ -0.52
SDF2-208ENST00000589788 LTBP2Q14767 1821 aa11.83□□□□□ -0.52
SDF2-208ENST00000589788 GRIN2DO15399 1336 aa11.82□□□□□ -0.52
SDF2-208ENST00000589788 SCN10AQ9Y5Y9 1956 aa11.82□□□□□ -0.52
SDF2-208ENST00000589788 DOCK5Q9H7D0 1870 aa11.82□□□□□ -0.52
SDF2-208ENST00000589788 PPFIA4O75335 1185 aa11.82□□□□□ -0.52
SDF2-208ENST00000589788 ITGB5P18084 799 aa11.82□□□□□ -0.52
SDF2-208ENST00000589788 BMP8BP34820 402 aa11.82□□□□□ -0.52
SDF2-208ENST00000589788 SEMA3FQ13275 785 aa11.82□□□□□ -0.52
SDF2-208ENST00000589788 NFRKBQ6P4R8 1299 aa11.82□□□□□ -0.52
SDF2-208ENST00000589788 METTL7BQ6UX53 244 aa11.82□□□□□ -0.52
SDF2-208ENST00000589788 LYPD8Q6UX82 237 aa11.82□□□□□ -0.52
SDF2-208ENST00000589788 CYFIP1Q7L576 1253 aa11.82□□□□□ -0.52
SDF2-208ENST00000589788 BADQ92934 168 aa11.82□□□□□ -0.52
SDF2-208ENST00000589788 SENP7Q9BQF6 1050 aa11.82□□□□□ -0.52
SDF2-208ENST00000589788 KATNAL1Q9BW62 490 aa11.82□□□□□ -0.52
SDF2-208ENST00000589788 TRPV6Q9H1D0 765 aa11.82□□□□□ -0.52
SDF2-208ENST00000589788 JADE2Q9NQC1 790 aa11.82□□□□□ -0.52
SDF2-208ENST00000589788 UBIAD1Q9Y5Z9 338 aa11.82□□□□□ -0.52
SDF2-208ENST00000589788 A0A1W2PPC1 479 aa11.81□□□□□ -0.52
SDF2-208ENST00000589788 MAFGO15525 162 aa11.81□□□□□ -0.52
SDF2-208ENST00000589788 B4GALT4O60513 344 aa11.81□□□□□ -0.52
SDF2-208ENST00000589788 CD4P01730 458 aa11.81□□□□□ -0.52
SDF2-208ENST00000589788 SUPT20HL2P0C7V6 817 aa11.81□□□□□ -0.52
SDF2-208ENST00000589788 ZNF286BP0CG31 522 aa11.81□□□□□ -0.52
SDF2-208ENST00000589788 XBP1P17861 261 aa11.81□□□□□ -0.52
SDF2-208ENST00000589788 SREBF1P36956 1147 aa11.81□□□□□ -0.52
SDF2-208ENST00000589788 ARHGAP4P98171 946 aa11.81□□□□□ -0.52
SDF2-208ENST00000589788 SP4Q02446 784 aa11.81□□□□□ -0.52
SDF2-208ENST00000589788 PTPN11Q06124 597 aaPredicted RBP11.81□□□□□ -0.52
SDF2-208ENST00000589788 NR6A1Q15406 480 aa11.81□□□□□ -0.52
SDF2-208ENST00000589788 ME3Q16798 604 aa11.81□□□□□ -0.52
SDF2-208ENST00000589788 HSDL1Q3SXM5 330 aa11.81□□□□□ -0.52
SDF2-208ENST00000589788 FAM177A1Q8N128 213 aaPredicted RBP11.81□□□□□ -0.52
SDF2-208ENST00000589788 NECAB1Q8N987 351 aa11.81□□□□□ -0.52
SDF2-208ENST00000589788 MXRA8Q9BRK3 442 aa11.81□□□□□ -0.52
SDF2-208ENST00000589788 PRO3102Q9H379 93 aa11.81□□□□□ -0.52
SDF2-208ENST00000589788 PKD2L1Q9P0L9 805 aa11.81□□□□□ -0.52
SDF2-208ENST00000589788 TBX21Q9UL17 535 aa11.81□□□□□ -0.52
SDF2-208ENST00000589788 STK36Q9NRP7 1315 aa11.81□□□□□ -0.52
SDF2-208ENST00000589788 TRIOBPQ9H2D6 2365 aa11.8□□□□□ -0.52
SDF2-208ENST00000589788 POTEMA6NI47 508 aa11.8□□□□□ -0.52
SDF2-208ENST00000589788 NR1I2O75469 434 aa11.8□□□□□ -0.52
SDF2-208ENST00000589788 TIMP1P01033 207 aa11.8□□□□□ -0.52
SDF2-208ENST00000589788 HOXD8P13378 290 aaPredicted RBP11.8□□□□□ -0.52
SDF2-208ENST00000589788 RBM25P49756 843 aaKnown RBP11.8□□□□□ -0.52
SDF2-208ENST00000589788 CEP55Q53EZ4 464 aa11.8□□□□□ -0.52
SDF2-208ENST00000589788 C7orf31Q8N865 590 aa11.8□□□□□ -0.52
SDF2-208ENST00000589788 ADAMTS19Q8TE59 1207 aa11.8□□□□□ -0.52
SDF2-208ENST00000589788 PPP1R13LQ8WUF5 828 aa11.8□□□□□ -0.52
SDF2-208ENST00000589788 WASF1Q92558 559 aa11.8□□□□□ -0.52
SDF2-208ENST00000589788 KAT2BQ92831 832 aa11.8□□□□□ -0.52
SDF2-208ENST00000589788 GTF3C6Q969F1 213 aa11.8□□□□□ -0.52
SDF2-208ENST00000589788 TBC1D32Q96NH3 1257 aa11.8□□□□□ -0.52
SDF2-208ENST00000589788 AIFM3Q96NN9 605 aa11.8□□□□□ -0.52
SDF2-208ENST00000589788 ALG1Q9BT22 464 aa11.8□□□□□ -0.52
SDF2-208ENST00000589788 HIPK3Q9H422 1215 aa11.8□□□□□ -0.52
SDF2-208ENST00000589788 BCAS3Q9H6U6 928 aa11.8□□□□□ -0.52
SDF2-208ENST00000589788 KCNH7Q9NS40 1196 aa11.8□□□□□ -0.52
SDF2-208ENST00000589788 ORC3Q9UBD5 711 aaPredicted RBP11.8□□□□□ -0.52
SDF2-208ENST00000589788 PCDHA4Q9UN74 947 aa11.8□□□□□ -0.52
SDF2-208ENST00000589788 LIMCH1Q9UPQ0 1083 aa11.8□□□□□ -0.52
SDF2-208ENST00000589788 NOD1Q9Y239 953 aa11.8□□□□□ -0.52
SDF2-208ENST00000589788 ATP9AO75110 1047 aa11.79□□□□□ -0.52
SDF2-208ENST00000589788 LARGE1O95461 756 aa11.79□□□□□ -0.52
SDF2-208ENST00000589788 F2P00734 622 aa11.79□□□□□ -0.52
SDF2-208ENST00000589788 LGALS2P05162 132 aa11.79□□□□□ -0.52
SDF2-208ENST00000589788 KCNA2P16389 499 aa11.79□□□□□ -0.52
SDF2-208ENST00000589788 ITGB8P26012 769 aa11.79□□□□□ -0.52
SDF2-208ENST00000589788 FPGSQ05932 587 aa11.79□□□□□ -0.52
SDF2-208ENST00000589788 KIAA0753Q2KHM9 967 aa11.79□□□□□ -0.52
SDF2-208ENST00000589788 GALNT17Q6IS24 598 aa11.79□□□□□ -0.52
SDF2-208ENST00000589788 NIPA1Q7RTP0 329 aa11.79□□□□□ -0.52
SDF2-208ENST00000589788 TDHQ8IZJ6 230 aa11.79□□□□□ -0.52
SDF2-208ENST00000589788 TMEM199Q8N511 208 aa11.79□□□□□ -0.52
SDF2-208ENST00000589788 CYP2W1Q8TAV3 490 aa11.79□□□□□ -0.52
SDF2-208ENST00000589788 RASGRP4Q8TDF6 673 aa11.79□□□□□ -0.52
SDF2-208ENST00000589788 GLMNQ92990 594 aa11.79□□□□□ -0.52
SDF2-208ENST00000589788 GPR20Q99678 358 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms