RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 ZNF622Q969S3 477 aaKnown RBP eCLIP18.52■□□□□ 0.566e-13■□□□□ 9.9
PRKCSH-205ENST00000587327 INPP4AQ96PE3 977 aaPredicted RBP18.52■□□□□ 0.56
PRKCSH-205ENST00000587327 FRMD3A2A2Y4 597 aa18.51■□□□□ 0.55
PRKCSH-205ENST00000587327 SLC26A4O43511 780 aa18.51■□□□□ 0.55
PRKCSH-205ENST00000587327 CLSTN1O94985 981 aa18.51■□□□□ 0.55
PRKCSH-205ENST00000587327 EPS15P42566 896 aa18.51■□□□□ 0.55
PRKCSH-205ENST00000587327 DNA2P51530 1060 aa18.51■□□□□ 0.55
PRKCSH-205ENST00000587327 SKOR1P84550 965 aa18.51■□□□□ 0.55
PRKCSH-205ENST00000587327 KCNH2Q12809 1159 aa18.51■□□□□ 0.55
PRKCSH-205ENST00000587327 PAK2Q13177 524 aa18.51■□□□□ 0.55
PRKCSH-205ENST00000587327 ASIC2Q16515 512 aa18.51■□□□□ 0.55
PRKCSH-205ENST00000587327 ARSHQ5FYA8 562 aa18.51■□□□□ 0.55
PRKCSH-205ENST00000587327 KCTD1Q719H9 257 aa18.51■□□□□ 0.55
PRKCSH-205ENST00000587327 PACSIN1Q9BY11 444 aa18.51■□□□□ 0.55
PRKCSH-205ENST00000587327 KCNMB3Q9NPA1 279 aa18.51■□□□□ 0.55
PRKCSH-205ENST00000587327 SLX4Q8IY92 1834 aa18.51■□□□□ 0.55
PRKCSH-205ENST00000587327 ZSCAN5CA6NGD5 496 aaPredicted RBP18.51■□□□□ 0.55
PRKCSH-205ENST00000587327 A6NNZ2 444 aa18.51■□□□□ 0.55
PRKCSH-205ENST00000587327 G3V3G9 751 aa18.51■□□□□ 0.55
PRKCSH-205ENST00000587327 CETN3O15182 167 aa18.51■□□□□ 0.55
PRKCSH-205ENST00000587327 FAM153BP0C7A2 387 aa18.51■□□□□ 0.55
PRKCSH-205ENST00000587327 CRKP46108 304 aa18.51■□□□□ 0.55
PRKCSH-205ENST00000587327 CCT5P48643 541 aa18.51■□□□□ 0.55
PRKCSH-205ENST00000587327 USP11P51784 963 aa18.51■□□□□ 0.55
PRKCSH-205ENST00000587327 GNGT1P63211 74 aa18.51■□□□□ 0.55
PRKCSH-205ENST00000587327 TUBB8Q3ZCM7 444 aa18.51■□□□□ 0.55
PRKCSH-205ENST00000587327 FAM153CQ494X1 144 aa18.51■□□□□ 0.55
PRKCSH-205ENST00000587327 DCAF8Q5TAQ9 597 aa18.51■□□□□ 0.55
PRKCSH-205ENST00000587327 ZNF772Q68DY9 489 aaPredicted RBP18.51■□□□□ 0.55
PRKCSH-205ENST00000587327 EFCAB13Q8IY85 973 aa18.51■□□□□ 0.55
PRKCSH-205ENST00000587327 BCAS4Q8TDM0 211 aa18.51■□□□□ 0.55
PRKCSH-205ENST00000587327 PPM1EQ8WY54 764 aa18.51■□□□□ 0.55
PRKCSH-205ENST00000587327 IFT81Q8WYA0 676 aa18.51■□□□□ 0.55
PRKCSH-205ENST00000587327 UIMC1Q96RL1 719 aa18.51■□□□□ 0.55
PRKCSH-205ENST00000587327 TMX4Q9H1E5 349 aaPredicted RBP18.51■□□□□ 0.55
PRKCSH-205ENST00000587327 EHD4Q9H223 541 aa18.51■□□□□ 0.55
PRKCSH-205ENST00000587327 FAM153AQ9UHL3 310 aa18.51■□□□□ 0.55
PRKCSH-205ENST00000587327 PACSIN2Q9UNF0 486 aaPredicted RBP18.51■□□□□ 0.55
PRKCSH-205ENST00000587327 PITPNM2Q9BZ72 1349 aa18.5■□□□□ 0.55
PRKCSH-205ENST00000587327 ESYT3A0FGR9 886 aa18.5■□□□□ 0.55
PRKCSH-205ENST00000587327 BTNL10A8MVZ5 291 aa18.5■□□□□ 0.55
PRKCSH-205ENST00000587327 USP17L15C9J2P7 530 aa18.5■□□□□ 0.55
PRKCSH-205ENST00000587327 USP17L13C9JLJ4 530 aa18.5■□□□□ 0.55
PRKCSH-205ENST00000587327 USP17L11C9JVI0 530 aa18.5■□□□□ 0.55
PRKCSH-205ENST00000587327 USP17L18D6R9N7 530 aa18.5■□□□□ 0.55
PRKCSH-205ENST00000587327 USP17L22D6RA61 530 aa18.5■□□□□ 0.55
PRKCSH-205ENST00000587327 USP17L17D6RBQ6 530 aa18.5■□□□□ 0.55
PRKCSH-205ENST00000587327 USP17L19D6RCP7 530 aa18.5■□□□□ 0.55
PRKCSH-205ENST00000587327 USP17L20D6RJB6 530 aa18.5■□□□□ 0.55
PRKCSH-205ENST00000587327 SLC12A3P55017 1021 aa18.5■□□□□ 0.55
PRKCSH-205ENST00000587327 USP17L24Q0WX57 530 aa18.5■□□□□ 0.55
PRKCSH-205ENST00000587327 ENOX2Q16206 610 aaKnown RBP18.5■□□□□ 0.55
PRKCSH-205ENST00000587327 CDC37Q16543 378 aaPredicted RBP18.5■□□□□ 0.55
PRKCSH-205ENST00000587327 USP17L6PQ6QN14 398 aa18.5■□□□□ 0.55
PRKCSH-205ENST00000587327 PODNQ7Z5L7 613 aa18.5■□□□□ 0.55
PRKCSH-205ENST00000587327 MREGQ8N565 214 aa18.5■□□□□ 0.55
PRKCSH-205ENST00000587327 KRT12Q99456 494 aa18.5■□□□□ 0.55
PRKCSH-205ENST00000587327 FAM107BQ9H098 131 aa18.5■□□□□ 0.55
PRKCSH-205ENST00000587327 GLT8D2Q9H1C3 349 aa18.5■□□□□ 0.55
PRKCSH-205ENST00000587327 CYP3A7-CYP3A51PA0A087WV96 503 aa18.49■□□□□ 0.55
PRKCSH-205ENST00000587327 EBAG9O00559 213 aa18.49■□□□□ 0.55
PRKCSH-205ENST00000587327 KRT14P02533 472 aa18.49■□□□□ 0.55
PRKCSH-205ENST00000587327 SLURP2P0DP57 97 aa18.49■□□□□ 0.55
PRKCSH-205ENST00000587327 CYP3A7P24462 503 aa18.49■□□□□ 0.55
PRKCSH-205ENST00000587327 C10orf76Q5T2E6 689 aa18.49■□□□□ 0.55
PRKCSH-205ENST00000587327 CCDC43Q96MW1 224 aaKnown RBP18.49■□□□□ 0.55
PRKCSH-205ENST00000587327 PCDHAC2Q9Y5I4 1007 aa18.49■□□□□ 0.55
PRKCSH-205ENST00000587327 ATAD5Q96QE3 1844 aa18.49■□□□□ 0.55
PRKCSH-205ENST00000587327 RGPD3A6NKT7 1758 aaPredicted RBP18.49■□□□□ 0.55
PRKCSH-205ENST00000587327 RGPD4Q7Z3J3 1758 aa18.49■□□□□ 0.55
PRKCSH-205ENST00000587327 MED24O75448 989 aa18.49■□□□□ 0.55
PRKCSH-205ENST00000587327 KRT18P05783 430 aaKnown RBP18.49■□□□□ 0.55
PRKCSH-205ENST00000587327 NR2F2P24468 414 aa18.49■□□□□ 0.55
PRKCSH-205ENST00000587327 PTK2Q05397 1052 aa18.49■□□□□ 0.55
PRKCSH-205ENST00000587327 CFAP58Q5T655 872 aa18.49■□□□□ 0.55
PRKCSH-205ENST00000587327 IRF2BP2Q7Z5L9 587 aa18.49■□□□□ 0.55
PRKCSH-205ENST00000587327 ZFPM1Q8IX07 1006 aa18.49■□□□□ 0.55
PRKCSH-205ENST00000587327 USP38Q8NB14 1042 aa18.49■□□□□ 0.55
PRKCSH-205ENST00000587327 ZDHHC15Q96MV8 337 aa18.49■□□□□ 0.55
PRKCSH-205ENST00000587327 DNAJC18Q9H819 358 aa18.49■□□□□ 0.55
PRKCSH-205ENST00000587327 MYH4Q9Y623 1939 aa18.49■□□□□ 0.55
PRKCSH-205ENST00000587327 ZNF233A6NK53 670 aa18.48■□□□□ 0.55
PRKCSH-205ENST00000587327 CES2O00748 559 aa18.48■□□□□ 0.55
PRKCSH-205ENST00000587327 STAT3P40763 770 aa18.48■□□□□ 0.55
PRKCSH-205ENST00000587327 DPY19L2P1Q6NXN4 242 aa18.48■□□□□ 0.55
PRKCSH-205ENST00000587327 FRMD5Q7Z6J6 570 aa18.48■□□□□ 0.55
PRKCSH-205ENST00000587327 SLFN12Q8IYM2 578 aa18.48■□□□□ 0.55
PRKCSH-205ENST00000587327 DHX36Q9H2U1 1008 aaKnown RBP18.48■□□□□ 0.55
PRKCSH-205ENST00000587327 ZHX3Q9H4I2 956 aa18.48■□□□□ 0.55
PRKCSH-205ENST00000587327 PLCB1Q9NQ66 1216 aa18.48■□□□□ 0.55
PRKCSH-205ENST00000587327 TMEM59LQ9UK28 342 aa18.48■□□□□ 0.55
PRKCSH-205ENST00000587327 TRAF3IP3Q9Y228 551 aa18.48■□□□□ 0.55
PRKCSH-205ENST00000587327 SHTN1A0MZ66 631 aa18.48■□□□□ 0.55
PRKCSH-205ENST00000587327 HLA-DOAP06340 250 aa18.48■□□□□ 0.55
PRKCSH-205ENST00000587327 CASP5P51878 434 aa18.48■□□□□ 0.55
PRKCSH-205ENST00000587327 RNASE9P60153 205 aaKnown RBP18.48■□□□□ 0.55
PRKCSH-205ENST00000587327 TTC19Q6DKK2 380 aaPredicted RBP18.48■□□□□ 0.55
PRKCSH-205ENST00000587327 STYK1Q6J9G0 422 aa18.48■□□□□ 0.55
PRKCSH-205ENST00000587327 KIAA0825Q8IV33 1275 aa18.48■□□□□ 0.55
PRKCSH-205ENST00000587327 WHAMMQ8TF30 809 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms