RNA–Protein interactions for RNA: ENST00000586499.5

TPM4-204, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-204ENST00000586499 NKX2-4Q9H2Z4 354 aa21.64■■□□□ 1.05
TPM4-204ENST00000586499 ZNF576Q9H609 170 aa21.64■■□□□ 1.05
TPM4-204ENST00000586499 AZI2Q9H6S1 392 aa21.64■■□□□ 1.05
TPM4-204ENST00000586499 GBF1Q92538 1859 aa21.63■■□□□ 1.05
TPM4-204ENST00000586499 STAT5BP51692 787 aa21.63■■□□□ 1.05
TPM4-204ENST00000586499 IGBP1P78318 339 aa21.63■■□□□ 1.05
TPM4-204ENST00000586499 GRIN2CQ14957 1233 aa21.63■■□□□ 1.05
TPM4-204ENST00000586499 MARCH8Q5T0T0 291 aa21.63■■□□□ 1.05
TPM4-204ENST00000586499 ABHD15Q6UXT9 468 aa21.63■■□□□ 1.05
TPM4-204ENST00000586499 MYLIPQ8WY64 445 aa21.63■■□□□ 1.05
TPM4-204ENST00000586499 MSRAQ9UJ68 235 aa21.63■■□□□ 1.05
TPM4-204ENST00000586499 CHD9Q3L8U1 2897 aa21.62■■□□□ 1.05
TPM4-204ENST00000586499 STK36Q9NRP7 1315 aa21.62■■□□□ 1.05
TPM4-204ENST00000586499 TMEM265A0A087WTH1 108 aa21.62■■□□□ 1.05
TPM4-204ENST00000586499 PARNO95453 639 aaKnown RBP21.62■■□□□ 1.05
TPM4-204ENST00000586499 FDPSP14324 419 aaKnown RBP21.62■■□□□ 1.05
TPM4-204ENST00000586499 INSRRP14616 1297 aa21.62■■□□□ 1.05
TPM4-204ENST00000586499 USP11P51784 963 aa21.62■■□□□ 1.05
TPM4-204ENST00000586499 SETQ01105 290 aaPredicted RBP21.62■■□□□ 1.05
TPM4-204ENST00000586499 PLCB4Q15147 1175 aa21.62■■□□□ 1.05
TPM4-204ENST00000586499 CNKSR3Q6P9H4 555 aa21.62■■□□□ 1.05
TPM4-204ENST00000586499 TMCO2Q7Z6W1 182 aaPredicted RBP21.62■■□□□ 1.05
TPM4-204ENST00000586499 DAGLBQ8NCG7 672 aa21.62■■□□□ 1.05
TPM4-204ENST00000586499 ORC3Q9UBD5 711 aaPredicted RBP21.62■■□□□ 1.05
TPM4-204ENST00000586499 IGKV6D-21A0A0A0MT36 114 aa21.61■■□□□ 1.05
TPM4-204ENST00000586499 RAB30Q15771 203 aa21.61■■□□□ 1.05
TPM4-204ENST00000586499 PLPPR4Q7Z2D5 763 aa21.61■■□□□ 1.05
TPM4-204ENST00000586499 TRAPPC12Q8WVT3 735 aa21.61■■□□□ 1.05
TPM4-204ENST00000586499 GTF3C6Q969F1 213 aa21.61■■□□□ 1.05
TPM4-204ENST00000586499 GJA10Q969M2 543 aa21.61■■□□□ 1.05
TPM4-204ENST00000586499 PHF20Q9BVI0 1012 aa21.61■■□□□ 1.05
TPM4-204ENST00000586499 TBC1D22BQ9NU19 505 aa21.61■■□□□ 1.05
TPM4-204ENST00000586499 TUBE1Q9UJT0 475 aa21.61■■□□□ 1.05
TPM4-204ENST00000586499 TRPC6Q9Y210 931 aa21.61■■□□□ 1.05
TPM4-204ENST00000586499 KAT6AQ92794 2004 aa21.61■■□□□ 1.05
TPM4-204ENST00000586499 BACH1O14867 736 aa21.6■■□□□ 1.05
TPM4-204ENST00000586499 MSH4O15457 936 aa21.6■■□□□ 1.05
TPM4-204ENST00000586499 BAIAP3O94812 1187 aa21.6■■□□□ 1.05
TPM4-204ENST00000586499 WDR5P61964 334 aaKnown RBP21.6■■□□□ 1.05
TPM4-204ENST00000586499 GALNT17Q6IS24 598 aa21.6■■□□□ 1.05
TPM4-204ENST00000586499 SWSAP1Q6NVH7 229 aa21.6■■□□□ 1.05
TPM4-204ENST00000586499 CCDC60Q8IWA6 550 aaPredicted RBP21.6■■□□□ 1.05
TPM4-204ENST00000586499 DBF4BQ8NFT6 615 aa21.6■■□□□ 1.05
TPM4-204ENST00000586499 MBLAC1A4D2B0 266 aaPredicted RBP21.59■■□□□ 1.05
TPM4-204ENST00000586499 TDP2O95551 362 aa21.59■■□□□ 1.05
TPM4-204ENST00000586499 DEFB103AP81534 67 aa21.59■■□□□ 1.05
TPM4-204ENST00000586499 MIS18BP1Q6P0N0 1132 aa21.59■■□□□ 1.05
TPM4-204ENST00000586499 NSUN7Q8NE18 718 aaKnown RBP21.59■■□□□ 1.05
TPM4-204ENST00000586499 OXER1Q8TDS5 423 aa21.59■■□□□ 1.05
TPM4-204ENST00000586499 DNAJB3Q8WWF6 145 aa21.59■■□□□ 1.05
TPM4-204ENST00000586499 SLC9A7Q96T83 725 aa21.59■■□□□ 1.05
TPM4-204ENST00000586499 KIF2CQ99661 725 aa21.59■■□□□ 1.05
TPM4-204ENST00000586499 PCDHA11Q9Y5I1 949 aa21.59■■□□□ 1.05
TPM4-204ENST00000586499 EYSQ5T1H1 3165 aa21.58■■□□□ 1.05
TPM4-204ENST00000586499 POTEB3A0JP26 581 aa21.58■■□□□ 1.05
TPM4-204ENST00000586499 JAK2O60674 1132 aa21.58■■□□□ 1.05
TPM4-204ENST00000586499 CHRNA1P02708 482 aa21.58■■□□□ 1.05
TPM4-204ENST00000586499 ATP4AP20648 1035 aa21.58■■□□□ 1.05
TPM4-204ENST00000586499 KCNJ6P48051 423 aa21.58■■□□□ 1.05
TPM4-204ENST00000586499 ST3GAL1Q11201 340 aa21.58■■□□□ 1.05
TPM4-204ENST00000586499 INF2Q27J81 1249 aa21.58■■□□□ 1.05
TPM4-204ENST00000586499 PLEKHG4Q58EX7 1191 aa21.58■■□□□ 1.05
TPM4-204ENST00000586499 ZNF746Q6NUN9 644 aaPredicted RBP21.58■■□□□ 1.05
TPM4-204ENST00000586499 POTEBQ6S5H4 581 aa21.58■■□□□ 1.05
TPM4-204ENST00000586499 HERC6Q8IVU3 1022 aa21.58■■□□□ 1.05
TPM4-204ENST00000586499 FAM177A1Q8N128 213 aaPredicted RBP21.58■■□□□ 1.05
TPM4-204ENST00000586499 PHOSPHO2Q8TCD6 241 aa21.58■■□□□ 1.05
TPM4-204ENST00000586499 C22orf23Q9BZE7 217 aa21.58■■□□□ 1.05
TPM4-204ENST00000586499 SLC28A3Q9HAS3 691 aa21.58■■□□□ 1.05
TPM4-204ENST00000586499 ZNF302Q9NR11 478 aa21.58■■□□□ 1.05
TPM4-204ENST00000586499 PTPRSQ13332 1948 aa21.57■■□□□ 1.04
TPM4-204ENST00000586499 ABHD14A-ACY1A0A1B0GW23 586 aa21.57■■□□□ 1.04
TPM4-204ENST00000586499 RRN3P2A6NIE6 340 aa21.57■■□□□ 1.04
TPM4-204ENST00000586499 CAND2O75155 1236 aa21.57■■□□□ 1.04
TPM4-204ENST00000586499 IKBKEQ14164 716 aa21.57■■□□□ 1.04
TPM4-204ENST00000586499 NONOQ15233 471 aaKnown RBP eCLIP21.57■■□□□ 1.042e-8■■■■■ 32.1
TPM4-204ENST00000586499 FAM26DQ5JW98 314 aa21.57■■□□□ 1.04
TPM4-204ENST00000586499 FAM160B1Q5W0V3 765 aa21.57■■□□□ 1.04
TPM4-204ENST00000586499 TAF2Q6P1X5 1199 aa21.57■■□□□ 1.04
TPM4-204ENST00000586499 PDXDC2PQ6P474 469 aa21.57■■□□□ 1.04
TPM4-204ENST00000586499 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.57■■□□□ 1.046e-8■□□□□ 9.1
TPM4-204ENST00000586499 TRMT1LQ7Z2T5 733 aaKnown RBP21.57■■□□□ 1.04
TPM4-204ENST00000586499 KRT25Q7Z3Z0 450 aa21.57■■□□□ 1.04
TPM4-204ENST00000586499 SLC5A5Q92911 643 aa21.57■■□□□ 1.04
TPM4-204ENST00000586499 FAM49AQ9H0Q0 323 aaPredicted RBP21.57■■□□□ 1.04
TPM4-204ENST00000586499 PRDM12Q9H4Q4 367 aa21.57■■□□□ 1.04
TPM4-204ENST00000586499 CYP3A7-CYP3A51PA0A087WV96 503 aa21.56■■□□□ 1.04
TPM4-204ENST00000586499 CA3P07451 260 aa21.56■■□□□ 1.04
TPM4-204ENST00000586499 XBP1P17861 261 aa21.56■■□□□ 1.04
TPM4-204ENST00000586499 CYP3A7P24462 503 aa21.56■■□□□ 1.04
TPM4-204ENST00000586499 FOSBP53539 338 aa21.56■■□□□ 1.04
TPM4-204ENST00000586499 KRT76Q01546 638 aa21.56■■□□□ 1.04
TPM4-204ENST00000586499 Q4G0T1 1027 aa21.56■■□□□ 1.04
TPM4-204ENST00000586499 EARS2Q5JPH6 523 aaKnown RBP21.56■■□□□ 1.04
TPM4-204ENST00000586499 RPAINQ86UA6 219 aa21.56■■□□□ 1.04
TPM4-204ENST00000586499 SAMM50Q9Y512 469 aa21.56■■□□□ 1.04
TPM4-204ENST00000586499 PCDHA10Q9Y5I2 948 aa21.56■■□□□ 1.04
TPM4-204ENST00000586499 CCDC194A0A1B0GVG4 234 aa21.55■■□□□ 1.04
TPM4-204ENST00000586499 CHMP2AO43633 222 aa21.55■■□□□ 1.04
TPM4-204ENST00000586499 GAS7O60861 476 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms