RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 ADORA1P30542 326 aa11.56□□□□□ -0.56
SEC22B-201ENST00000578049 SERPINB4P48594 390 aa11.56□□□□□ -0.56
SEC22B-201ENST00000578049 TFDP2Q14188 446 aa11.56□□□□□ -0.56
SEC22B-201ENST00000578049 HNRNPLLQ8WVV9 542 aaKnown RBP11.56□□□□□ -0.56
SEC22B-201ENST00000578049 TRAIPQ9BWF2 469 aa11.56□□□□□ -0.56
SEC22B-201ENST00000578049 XDHP47989 1333 aa11.56□□□□□ -0.56
SEC22B-201ENST00000578049 PARP9Q8IXQ6 854 aa11.56□□□□□ -0.56
SEC22B-201ENST00000578049 SPDL1Q96EA4 605 aa11.56□□□□□ -0.56
SEC22B-201ENST00000578049 ARID5BQ14865 1188 aa11.55□□□□□ -0.56
SEC22B-201ENST00000578049 SLC7A3Q8WY07 619 aa11.55□□□□□ -0.56
SEC22B-201ENST00000578049 CCDC138Q96M89 665 aa11.55□□□□□ -0.56
SEC22B-201ENST00000578049 KIAA1586Q9HCI6 787 aa11.55□□□□□ -0.56
SEC22B-201ENST00000578049 ARL4AP40617 200 aa11.55□□□□□ -0.56
SEC22B-201ENST00000578049 CYP4A11Q02928 519 aa11.55□□□□□ -0.56
SEC22B-201ENST00000578049 KAZNQ674X7 775 aa11.55□□□□□ -0.56
SEC22B-201ENST00000578049 APLFQ8IW19 511 aaPredicted RBP11.55□□□□□ -0.56
SEC22B-201ENST00000578049 HDAC11Q96DB2 347 aa11.55□□□□□ -0.56
SEC22B-201ENST00000578049 DHX36Q9H2U1 1008 aaKnown RBP11.55□□□□□ -0.56
SEC22B-201ENST00000578049 POLGP54098 1239 aaPredicted RBP11.55□□□□□ -0.56
SEC22B-201ENST00000578049 NBPF20Q3BBV1 942 aa11.55□□□□□ -0.56
SEC22B-201ENST00000578049 SGMS1Q86VZ5 419 aa11.55□□□□□ -0.56
SEC22B-201ENST00000578049 LRRC37BQ96QE4 947 aa11.55□□□□□ -0.56
SEC22B-201ENST00000578049 STRBPQ96SI9 672 aaKnown RBP11.55□□□□□ -0.56
SEC22B-201ENST00000578049 TRIM56Q9BRZ2 755 aaKnown RBP11.55□□□□□ -0.56
SEC22B-201ENST00000578049 YY1AP1Q9H869 796 aa11.55□□□□□ -0.56
SEC22B-201ENST00000578049 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.55□□□□□ -0.56
SEC22B-201ENST00000578049 GOLGA8HP0CJ92 632 aa11.55□□□□□ -0.56
SEC22B-201ENST00000578049 PLCB4Q15147 1175 aa11.55□□□□□ -0.56
SEC22B-201ENST00000578049 LRRC47Q8N1G4 583 aaKnown RBP11.55□□□□□ -0.56
SEC22B-201ENST00000578049 FRMD3A2A2Y4 597 aa11.55□□□□□ -0.56
SEC22B-201ENST00000578049 TESPA1A2RU30 521 aaPredicted RBP11.55□□□□□ -0.56
SEC22B-201ENST00000578049 PALMO75781 387 aa11.55□□□□□ -0.56
SEC22B-201ENST00000578049 HAUS5O94927 633 aa11.55□□□□□ -0.56
SEC22B-201ENST00000578049 POLD1P28340 1107 aa11.55□□□□□ -0.56
SEC22B-201ENST00000578049 SLCO1A2P46721 670 aa11.55□□□□□ -0.56
SEC22B-201ENST00000578049 TTBK2Q6IQ55 1244 aa11.55□□□□□ -0.56
SEC22B-201ENST00000578049 TRIML2Q8N7C3 387 aa11.55□□□□□ -0.56
SEC22B-201ENST00000578049 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.55□□□□□ -0.56
SEC22B-201ENST00000578049 PTPROQ16827 1216 aa11.54□□□□□ -0.56
SEC22B-201ENST00000578049 ELOA2Q8IYF1 753 aaPredicted RBP11.54□□□□□ -0.56
SEC22B-201ENST00000578049 ORAI2Q96SN7 254 aa11.54□□□□□ -0.56
SEC22B-201ENST00000578049 SEL1LQ9UBV2 794 aa11.54□□□□□ -0.56
SEC22B-201ENST00000578049 MED14O60244 1454 aa11.54□□□□□ -0.56
SEC22B-201ENST00000578049 H0YIN7 160 aa11.54□□□□□ -0.56
SEC22B-201ENST00000578049 H7C1W4 665 aa11.54□□□□□ -0.56
SEC22B-201ENST00000578049 APOEP02649 317 aa11.54□□□□□ -0.56
SEC22B-201ENST00000578049 GTF2IP78347 998 aa11.54□□□□□ -0.56
SEC22B-201ENST00000578049 ART3Q13508 389 aa11.54□□□□□ -0.56
SEC22B-201ENST00000578049 ANKRD36BP1Q96IX9 119 aa11.54□□□□□ -0.56
SEC22B-201ENST00000578049 PUS7LQ9H0K6 701 aaKnown RBP11.54□□□□□ -0.56
SEC22B-201ENST00000578049 KLC4Q9NSK0 619 aa11.54□□□□□ -0.56
SEC22B-201ENST00000578049 TMEM232C9JQI7 657 aa11.54□□□□□ -0.56
SEC22B-201ENST00000578049 SLC7A5Q01650 507 aa11.54□□□□□ -0.56
SEC22B-201ENST00000578049 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.54□□□□□ -0.56
SEC22B-201ENST00000578049 SLFN12LQ6IEE8 588 aa11.54□□□□□ -0.56
SEC22B-201ENST00000578049 PUS3Q9BZE2 481 aaKnown RBP11.54□□□□□ -0.56
SEC22B-201ENST00000578049 FOXP3Q9BZS1 431 aa11.54□□□□□ -0.56
SEC22B-201ENST00000578049 XAB2Q9HCS7 855 aaKnown RBP11.54□□□□□ -0.56
SEC22B-201ENST00000578049 LIMA1Q9UHB6 759 aaKnown RBP11.54□□□□□ -0.56
SEC22B-201ENST00000578049 CAPN11Q9UMQ6 739 aa11.54□□□□□ -0.56
SEC22B-201ENST00000578049 FRMPD2Q68DX3 1309 aaPredicted RBP11.54□□□□□ -0.56
SEC22B-201ENST00000578049 PMS2P54278 862 aa11.54□□□□□ -0.56
SEC22B-201ENST00000578049 GPC5P78333 572 aa11.54□□□□□ -0.56
SEC22B-201ENST00000578049 C3orf20Q8ND61 904 aa11.54□□□□□ -0.56
SEC22B-201ENST00000578049 MAGI3Q5TCQ9 1506 aa11.54□□□□□ -0.56
SEC22B-201ENST00000578049 ZRANB2O95218 330 aaKnown RBP eCLIP11.54□□□□□ -0.56
SEC22B-201ENST00000578049 DDIT3P35638 169 aa11.54□□□□□ -0.56
SEC22B-201ENST00000578049 LRRC41Q15345 812 aa11.54□□□□□ -0.56
SEC22B-201ENST00000578049 MOV10L1Q9BXT6 1211 aaKnown RBP11.54□□□□□ -0.56
SEC22B-201ENST00000578049 MLXIPQ9HAP2 919 aa11.54□□□□□ -0.56
SEC22B-201ENST00000578049 UBE2TQ9NPD8 197 aaPredicted RBP11.54□□□□□ -0.56
SEC22B-201ENST00000578049 TTLL3Q9Y4R7 772 aa11.54□□□□□ -0.56
SEC22B-201ENST00000578049 SSU72P8A0A1W2PR75 194 aa11.53□□□□□ -0.56
SEC22B-201ENST00000578049 RASA4BC9J798 803 aa11.53□□□□□ -0.56
SEC22B-201ENST00000578049 RASA4O43374 803 aa11.53□□□□□ -0.56
SEC22B-201ENST00000578049 ABCB5Q2M3G0 1257 aa11.53□□□□□ -0.56
SEC22B-201ENST00000578049 DHX40Q8IX18 779 aaKnown RBP11.53□□□□□ -0.56
SEC22B-201ENST00000578049 FLAD1Q8NFF5 587 aa11.53□□□□□ -0.56
SEC22B-201ENST00000578049 SLC5A4Q9NY91 659 aa11.53□□□□□ -0.56
SEC22B-201ENST00000578049 SERPINB13Q9UIV8 391 aa11.53□□□□□ -0.56
SEC22B-201ENST00000578049 MAGOHP61326 146 aaKnown RBP11.53□□□□□ -0.56
SEC22B-201ENST00000578049 IRX1P78414 480 aaPredicted RBP11.53□□□□□ -0.56
SEC22B-201ENST00000578049 IQCB1Q15051 598 aa11.53□□□□□ -0.56
SEC22B-201ENST00000578049 PFKFB3Q16875 520 aaPredicted RBP11.53□□□□□ -0.56
SEC22B-201ENST00000578049 SH3GL3Q99963 347 aa11.53□□□□□ -0.56
SEC22B-201ENST00000578049 ZNF577Q9BSK1 485 aa11.53□□□□□ -0.56
SEC22B-201ENST00000578049 PNMA6FA0A0J9YX94 578 aa11.53□□□□□ -0.56
SEC22B-201ENST00000578049 RASSF10A6NK89 507 aa11.53□□□□□ -0.56
SEC22B-201ENST00000578049 COPEO14579 308 aa11.53□□□□□ -0.56
SEC22B-201ENST00000578049 SLC26A4O43511 780 aa11.53□□□□□ -0.56
SEC22B-201ENST00000578049 LDHAP00338 332 aaKnown RBP11.53□□□□□ -0.56
SEC22B-201ENST00000578049 AGTP01019 485 aa11.53□□□□□ -0.56
SEC22B-201ENST00000578049 S100BP04271 92 aaPredicted RBP11.53□□□□□ -0.56
SEC22B-201ENST00000578049 MX2P20592 715 aa11.53□□□□□ -0.56
SEC22B-201ENST00000578049 BASP1P80723 227 aaKnown RBP11.53□□□□□ -0.56
SEC22B-201ENST00000578049 CAPRIN2Q6IMN6 1127 aaKnown RBP11.53□□□□□ -0.56
SEC22B-201ENST00000578049 SYDE1Q6ZW31 735 aaPredicted RBP11.53□□□□□ -0.56
SEC22B-201ENST00000578049 ANO5Q75V66 913 aa11.53□□□□□ -0.56
SEC22B-201ENST00000578049 MB21D2Q8IYB1 491 aaPredicted RBP11.53□□□□□ -0.56
SEC22B-201ENST00000578049 CATSPER1Q8NEC5 780 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 472 ms