RNA–Protein interactions for RNA: ENST00000576582.5

CALCOCO2-228, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-228ENST00000576582 UTP14CQ5TAP6 766 aaKnown RBP12.33□□□□□ -0.44
CALCOCO2-228ENST00000576582 PCNX4Q63HM2 1172 aa12.33□□□□□ -0.44
CALCOCO2-228ENST00000576582 TRIM67Q6ZTA4 783 aa12.33□□□□□ -0.44
CALCOCO2-228ENST00000576582 NLRX1Q86UT6 975 aa12.33□□□□□ -0.44
CALCOCO2-228ENST00000576582 TRIM50Q86XT4 487 aa12.33□□□□□ -0.44
CALCOCO2-228ENST00000576582 EFHBQ8N7U6 833 aa12.33□□□□□ -0.44
CALCOCO2-228ENST00000576582 PBXIP1Q96AQ6 731 aa12.33□□□□□ -0.44
CALCOCO2-228ENST00000576582 MSLNLQ96KJ4 702 aa12.33□□□□□ -0.44
CALCOCO2-228ENST00000576582 FTHL17Q9BXU8 183 aa12.33□□□□□ -0.44
CALCOCO2-228ENST00000576582 SQORQ9Y6N5 450 aa12.33□□□□□ -0.44
CALCOCO2-228ENST00000576582 TECTAO75443 2155 aa12.33□□□□□ -0.44
CALCOCO2-228ENST00000576582 NLRC5Q86WI3 1866 aa12.32□□□□□ -0.44
CALCOCO2-228ENST00000576582 C5orf42Q9H799 3197 aa12.32□□□□□ -0.44
CALCOCO2-228ENST00000576582 MBLAC1A4D2B0 266 aaPredicted RBP12.32□□□□□ -0.44
CALCOCO2-228ENST00000576582 TBX10O75333 385 aa12.32□□□□□ -0.44
CALCOCO2-228ENST00000576582 NDUFV1P49821 464 aa12.32□□□□□ -0.44
CALCOCO2-228ENST00000576582 MGAT3Q09327 533 aa12.32□□□□□ -0.44
CALCOCO2-228ENST00000576582 FBXO47Q5MNV8 452 aa12.32□□□□□ -0.44
CALCOCO2-228ENST00000576582 TSHZ1Q6ZSZ6 1077 aa12.32□□□□□ -0.44
CALCOCO2-228ENST00000576582 CYB5R4Q7L1T6 521 aa12.32□□□□□ -0.44
CALCOCO2-228ENST00000576582 CMTR2Q8IYT2 770 aaKnown RBP12.32□□□□□ -0.44
CALCOCO2-228ENST00000576582 SPPL3Q8TCT6 385 aa12.32□□□□□ -0.44
CALCOCO2-228ENST00000576582 SEPT1Q8WYJ6 367 aa12.32□□□□□ -0.44
CALCOCO2-228ENST00000576582 TNPO1Q92973 898 aaKnown RBP12.32□□□□□ -0.44
CALCOCO2-228ENST00000576582 CDHR1Q96JP9 859 aa12.32□□□□□ -0.44
CALCOCO2-228ENST00000576582 IL25Q9H293 177 aa12.32□□□□□ -0.44
CALCOCO2-228ENST00000576582 ALG13Q9NP73 1137 aaKnown RBP12.32□□□□□ -0.44
CALCOCO2-228ENST00000576582 ERAP1Q9NZ08 941 aa12.32□□□□□ -0.44
CALCOCO2-228ENST00000576582 ZDBF2Q9HCK1 2354 aa12.32□□□□□ -0.44
CALCOCO2-228ENST00000576582 ZFHX2Q9C0A1 2572 aaPredicted RBP12.31□□□□□ -0.44
CALCOCO2-228ENST00000576582 ERICH2A1L162 156 aa12.31□□□□□ -0.44
CALCOCO2-228ENST00000576582 TMEM221A6NGB7 291 aa12.31□□□□□ -0.44
CALCOCO2-228ENST00000576582 LOC730098B7Z3J9 87 aa12.31□□□□□ -0.44
CALCOCO2-228ENST00000576582 M0R296 226 aa12.31□□□□□ -0.44
CALCOCO2-228ENST00000576582 PIK3CDO00329 1044 aa12.31□□□□□ -0.44
CALCOCO2-228ENST00000576582 CYTH3O43739 400 aa12.31□□□□□ -0.44
CALCOCO2-228ENST00000576582 ST18O60284 1047 aa12.31□□□□□ -0.44
CALCOCO2-228ENST00000576582 IGHDP01880 384 aa12.31□□□□□ -0.44
CALCOCO2-228ENST00000576582 STAG3L1P0CL83 205 aa12.31□□□□□ -0.44
CALCOCO2-228ENST00000576582 GTF2F1P35269 517 aaKnown RBP eCLIP12.31□□□□□ -0.44
CALCOCO2-228ENST00000576582 TCF7P36402 384 aaPredicted RBP12.31□□□□□ -0.44
CALCOCO2-228ENST00000576582 ZXDAP98168 799 aa12.31□□□□□ -0.44
CALCOCO2-228ENST00000576582 TROAPQ12815 778 aa12.31□□□□□ -0.44
CALCOCO2-228ENST00000576582 PPFIA1Q13136 1202 aa12.31□□□□□ -0.44
CALCOCO2-228ENST00000576582 CBX2Q14781 532 aaPredicted RBP12.31□□□□□ -0.44
CALCOCO2-228ENST00000576582 IER5Q5VY09 327 aa12.31□□□□□ -0.44
CALCOCO2-228ENST00000576582 RUFY4Q6ZNE9 571 aa12.31□□□□□ -0.44
CALCOCO2-228ENST00000576582 SUGP1Q8IWZ8 645 aaKnown RBP12.31□□□□□ -0.44
CALCOCO2-228ENST00000576582 CRIPAKQ8N1N5 446 aa12.31□□□□□ -0.44
CALCOCO2-228ENST00000576582 SMRP1Q8NCR6 262 aa12.31□□□□□ -0.44
CALCOCO2-228ENST00000576582 SMARCC2Q8TAQ2 1214 aa12.31□□□□□ -0.44
CALCOCO2-228ENST00000576582 CUL5Q93034 780 aa12.31□□□□□ -0.44
CALCOCO2-228ENST00000576582 IRF2BPLQ9H1B7 796 aa12.31□□□□□ -0.44
CALCOCO2-228ENST00000576582 CLEC1BQ9P126 229 aa12.31□□□□□ -0.44
CALCOCO2-228ENST00000576582 TUBE1Q9UJT0 475 aa12.31□□□□□ -0.44
CALCOCO2-228ENST00000576582 TTC3P53804 2025 aa12.31□□□□□ -0.44
CALCOCO2-228ENST00000576582 CACNA1HO95180 2353 aa12.3□□□□□ -0.44
CALCOCO2-228ENST00000576582 KAT6AQ92794 2004 aa12.3□□□□□ -0.44
CALCOCO2-228ENST00000576582 FSD2A1L4K1 749 aa12.3□□□□□ -0.44
CALCOCO2-228ENST00000576582 RRN3P2A6NIE6 340 aa12.3□□□□□ -0.44
CALCOCO2-228ENST00000576582 IFIT3O14879 490 aaKnown RBP12.3□□□□□ -0.44
CALCOCO2-228ENST00000576582 LINC01565O15544 149 aa12.3□□□□□ -0.44
CALCOCO2-228ENST00000576582 ITGB1P05556 798 aa12.3□□□□□ -0.44
CALCOCO2-228ENST00000576582 SMARCA1P28370 1054 aa12.3□□□□□ -0.44
CALCOCO2-228ENST00000576582 SP4Q02446 784 aa12.3□□□□□ -0.44
CALCOCO2-228ENST00000576582 SART3Q15020 963 aaKnown RBP12.3□□□□□ -0.44
CALCOCO2-228ENST00000576582 GRIK4Q16099 956 aa12.3□□□□□ -0.44
CALCOCO2-228ENST00000576582 NPAS4Q8IUM7 802 aa12.3□□□□□ -0.44
CALCOCO2-228ENST00000576582 FBXL6Q8N531 539 aa12.3□□□□□ -0.44
CALCOCO2-228ENST00000576582 PRSS33Q8NF86 280 aa12.3□□□□□ -0.44
CALCOCO2-228ENST00000576582 DNAJB3Q8WWF6 145 aa12.3□□□□□ -0.44
CALCOCO2-228ENST00000576582 GPRASP2Q96D09 838 aa12.3□□□□□ -0.44
CALCOCO2-228ENST00000576582 SNX27Q96L92 541 aa12.3□□□□□ -0.44
CALCOCO2-228ENST00000576582 SMARCAD1Q9H4L7 1026 aa12.3□□□□□ -0.44
CALCOCO2-228ENST00000576582 CDY2AQ9Y6F7 541 aa12.3□□□□□ -0.44
CALCOCO2-228ENST00000576582 MRPL42Q9Y6G3 142 aaKnown RBP12.3□□□□□ -0.44
CALCOCO2-228ENST00000576582 GSTTP1A0A1W2PQM5 241 aa12.29□□□□□ -0.44
CALCOCO2-228ENST00000576582 M0QZ92 97 aa12.29□□□□□ -0.44
CALCOCO2-228ENST00000576582 MAFGO15525 162 aa12.29□□□□□ -0.44
CALCOCO2-228ENST00000576582 CYP21A2P08686 494 aa12.29□□□□□ -0.44
CALCOCO2-228ENST00000576582 DNAJB1P25685 340 aa12.29□□□□□ -0.44
CALCOCO2-228ENST00000576582 MRPS6P82932 125 aaKnown RBP12.29□□□□□ -0.44
CALCOCO2-228ENST00000576582 MARCH8Q5T0T0 291 aa12.29□□□□□ -0.44
CALCOCO2-228ENST00000576582 IER5LQ5T953 404 aa12.29□□□□□ -0.44
CALCOCO2-228ENST00000576582 CATIPQ7Z7H3 387 aa12.29□□□□□ -0.44
CALCOCO2-228ENST00000576582 RTN4RL1Q86UN2 441 aaPredicted RBP12.29□□□□□ -0.44
CALCOCO2-228ENST00000576582 KLHL23Q8NBE8 558 aa12.29□□□□□ -0.44
CALCOCO2-228ENST00000576582 GLG1Q92896 1179 aa12.29□□□□□ -0.44
CALCOCO2-228ENST00000576582 MAP3K14Q99558 947 aa12.29□□□□□ -0.44
CALCOCO2-228ENST00000576582 PHF7Q9BWX1 381 aaPredicted RBP12.29□□□□□ -0.44
CALCOCO2-228ENST00000576582 AGO3Q9H9G7 860 aaKnown RBP12.29□□□□□ -0.44
CALCOCO2-228ENST00000576582 TELO2Q9Y4R8 837 aa12.29□□□□□ -0.44
CALCOCO2-228ENST00000576582 U3KPZ7 1027 aaPredicted RBP12.29□□□□□ -0.44
CALCOCO2-228ENST00000576582 MEIS2O14770 477 aa12.28□□□□□ -0.44
CALCOCO2-228ENST00000576582 ATP9AO75110 1047 aa12.28□□□□□ -0.44
CALCOCO2-228ENST00000576582 KCNA2P16389 499 aa12.28□□□□□ -0.44
CALCOCO2-228ENST00000576582 ATF7P17544 494 aaPredicted RBP12.28□□□□□ -0.44
CALCOCO2-228ENST00000576582 CD52P31358 61 aa12.28□□□□□ -0.44
CALCOCO2-228ENST00000576582 NRIP1P48552 1158 aa12.28□□□□□ -0.44
CALCOCO2-228ENST00000576582 UBE3AQ05086 875 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms