RNA–Protein interactions for RNA: ENST00000575882.5

TOM1L1-221, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TOM1L1, Length 2,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-221ENST00000575882 KIF4AO95239 1232 aa18.87■□□□□ 0.61
TOM1L1-221ENST00000575882 STAT3P40763 770 aa18.87■□□□□ 0.61
TOM1L1-221ENST00000575882 USP11P51784 963 aa18.87■□□□□ 0.61
TOM1L1-221ENST00000575882 CASP5P51878 434 aa18.87■□□□□ 0.61
TOM1L1-221ENST00000575882 ERVK-9P63128 1117 aa18.87■□□□□ 0.61
TOM1L1-221ENST00000575882 ARSHQ5FYA8 562 aa18.87■□□□□ 0.61
TOM1L1-221ENST00000575882 C10orf76Q5T2E6 689 aa18.87■□□□□ 0.61
TOM1L1-221ENST00000575882 KCTD1Q719H9 257 aa18.87■□□□□ 0.61
TOM1L1-221ENST00000575882 EPN3Q9H201 632 aa18.87■□□□□ 0.61
TOM1L1-221ENST00000575882 ATF5Q9Y2D1 282 aaPredicted RBP18.87■□□□□ 0.61
TOM1L1-221ENST00000575882 CEP104O60308 925 aa18.87■□□□□ 0.61
TOM1L1-221ENST00000575882 MED24O75448 989 aa18.87■□□□□ 0.61
TOM1L1-221ENST00000575882 PTPROQ16827 1216 aa18.87■□□□□ 0.61
TOM1L1-221ENST00000575882 CEP85LQ5SZL2 805 aa18.87■□□□□ 0.61
TOM1L1-221ENST00000575882 EMC10Q5UCC4 262 aa18.87■□□□□ 0.61
TOM1L1-221ENST00000575882 DNAAF5Q86Y56 855 aa18.87■□□□□ 0.61
TOM1L1-221ENST00000575882 ISCUQ9H1K1 167 aa18.87■□□□□ 0.61
TOM1L1-221ENST00000575882 FRMD3A2A2Y4 597 aa18.86■□□□□ 0.61
TOM1L1-221ENST00000575882 POTEFA5A3E0 1075 aa18.86■□□□□ 0.61
TOM1L1-221ENST00000575882 HMGB1P1B2RPK0 211 aaPredicted RBP18.86■□□□□ 0.61
TOM1L1-221ENST00000575882 USP17L15C9J2P7 530 aa18.86■□□□□ 0.61
TOM1L1-221ENST00000575882 USP17L13C9JLJ4 530 aa18.86■□□□□ 0.61
TOM1L1-221ENST00000575882 USP17L11C9JVI0 530 aa18.86■□□□□ 0.61
TOM1L1-221ENST00000575882 USP17L18D6R9N7 530 aa18.86■□□□□ 0.61
TOM1L1-221ENST00000575882 USP17L22D6RA61 530 aa18.86■□□□□ 0.61
TOM1L1-221ENST00000575882 USP17L17D6RBQ6 530 aa18.86■□□□□ 0.61
TOM1L1-221ENST00000575882 USP17L19D6RCP7 530 aa18.86■□□□□ 0.61
TOM1L1-221ENST00000575882 USP17L20D6RJB6 530 aa18.86■□□□□ 0.61
TOM1L1-221ENST00000575882 POTEIP0CG38 1075 aa18.86■□□□□ 0.61
TOM1L1-221ENST00000575882 UCHL3P15374 230 aa18.86■□□□□ 0.61
TOM1L1-221ENST00000575882 SLC12A3P55017 1021 aa18.86■□□□□ 0.61
TOM1L1-221ENST00000575882 USP17L24Q0WX57 530 aa18.86■□□□□ 0.61
TOM1L1-221ENST00000575882 DPY19L2P1Q6NXN4 242 aa18.86■□□□□ 0.61
TOM1L1-221ENST00000575882 USP17L6PQ6QN14 398 aa18.86■□□□□ 0.61
TOM1L1-221ENST00000575882 POTEGQ6S5H5 508 aa18.86■□□□□ 0.61
TOM1L1-221ENST00000575882 POTEEQ6S8J3 1075 aa18.86■□□□□ 0.61
TOM1L1-221ENST00000575882 MMS22LQ6ZRQ5 1243 aa18.86■□□□□ 0.61
TOM1L1-221ENST00000575882 TBC1D22AQ8WUA7 517 aa18.86■□□□□ 0.61
TOM1L1-221ENST00000575882 NAP1L4Q99733 375 aaKnown RBP18.86■□□□□ 0.61
TOM1L1-221ENST00000575882 ATAD5Q96QE3 1844 aa18.86■□□□□ 0.61
TOM1L1-221ENST00000575882 PPP1R37O75864 691 aa18.85■□□□□ 0.61
TOM1L1-221ENST00000575882 GTF2A1P52655 376 aaPredicted RBP18.85■□□□□ 0.61
TOM1L1-221ENST00000575882 LRRC57Q8N9N7 239 aa18.85■□□□□ 0.61
TOM1L1-221ENST00000575882 C1orf131Q8NDD1 294 aaKnown RBP18.85■□□□□ 0.61
TOM1L1-221ENST00000575882 PBKQ96KB5 322 aa18.85■□□□□ 0.61
TOM1L1-221ENST00000575882 DHX36Q9H2U1 1008 aaKnown RBP18.85■□□□□ 0.61
TOM1L1-221ENST00000575882 KCNMB3Q9NPA1 279 aa18.85■□□□□ 0.61
TOM1L1-221ENST00000575882 PLCB1Q9NQ66 1216 aa18.85■□□□□ 0.61
TOM1L1-221ENST00000575882 ARMCX3Q9UH62 379 aaPredicted RBP18.85■□□□□ 0.61
TOM1L1-221ENST00000575882 SWAP70Q9UH65 585 aa18.85■□□□□ 0.61
TOM1L1-221ENST00000575882 NAGPAQ9UK23 515 aa18.85■□□□□ 0.61
TOM1L1-221ENST00000575882 AFPP02771 609 aaKnown RBP18.85■□□□□ 0.61
TOM1L1-221ENST00000575882 ECHS1P30084 290 aa18.85■□□□□ 0.61
TOM1L1-221ENST00000575882 PTGISQ16647 500 aa18.85■□□□□ 0.61
TOM1L1-221ENST00000575882 IFI16Q16666 785 aaKnown RBP18.85■□□□□ 0.61
TOM1L1-221ENST00000575882 SCFD2Q8WU76 684 aa18.85■□□□□ 0.61
TOM1L1-221ENST00000575882 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.85■□□□□ 0.61
TOM1L1-221ENST00000575882 BZW2Q9Y6E2 419 aaKnown RBP18.85■□□□□ 0.61
TOM1L1-221ENST00000575882 ARFGEF1Q9Y6D6 1849 aa18.85■□□□□ 0.61
TOM1L1-221ENST00000575882 ATXN2Q99700 1313 aaKnown RBP18.85■□□□□ 0.61
TOM1L1-221ENST00000575882 PITPNM2Q9BZ72 1349 aa18.85■□□□□ 0.61
TOM1L1-221ENST00000575882 MDH1P40925 334 aaKnown RBP18.84■□□□□ 0.61
TOM1L1-221ENST00000575882 ITGB3BPQ13352 177 aaPredicted RBP18.84■□□□□ 0.61
TOM1L1-221ENST00000575882 GPATCH4Q5T3I0 446 aaKnown RBP18.84■□□□□ 0.61
TOM1L1-221ENST00000575882 NAA35Q5VZE5 725 aa18.84■□□□□ 0.61
TOM1L1-221ENST00000575882 ALKBH5Q6P6C2 394 aaKnown RBP18.84■□□□□ 0.61
TOM1L1-221ENST00000575882 FRMD5Q7Z6J6 570 aa18.84■□□□□ 0.61
TOM1L1-221ENST00000575882 ACTRT1Q8TDG2 376 aa18.84■□□□□ 0.61
TOM1L1-221ENST00000575882 AP1M1Q9BXS5 423 aa18.84■□□□□ 0.61
TOM1L1-221ENST00000575882 DDX4Q9NQI0 724 aaKnown RBP18.84■□□□□ 0.61
TOM1L1-221ENST00000575882 GOLGA6L10A6NI86 522 aa18.84■□□□□ 0.61
TOM1L1-221ENST00000575882 KIAA0754O94854 1291 aa18.84■□□□□ 0.61
TOM1L1-221ENST00000575882 PON1P27169 355 aa18.84■□□□□ 0.61
TOM1L1-221ENST00000575882 CUL1Q13616 776 aa18.84■□□□□ 0.61
TOM1L1-221ENST00000575882 EXOC3L4Q17RC7 722 aa18.84■□□□□ 0.61
TOM1L1-221ENST00000575882 SPATS2Q86XZ4 545 aaKnown RBP18.84■□□□□ 0.61
TOM1L1-221ENST00000575882 RBM46Q8TBY0 533 aaKnown RBP18.84■□□□□ 0.61
TOM1L1-221ENST00000575882 CENPHQ9H3R5 247 aa18.84■□□□□ 0.61
TOM1L1-221ENST00000575882 TMBIM4Q9HC24 238 aa18.84■□□□□ 0.61
TOM1L1-221ENST00000575882 SERPINB13Q9UIV8 391 aa18.84■□□□□ 0.61
TOM1L1-221ENST00000575882 HSD17B3P37058 310 aa18.83■□□□□ 0.61
TOM1L1-221ENST00000575882 DCAF17Q5H9S7 520 aaPredicted RBP18.83■□□□□ 0.61
TOM1L1-221ENST00000575882 FBXW10Q5XX13 1052 aa18.83■□□□□ 0.61
TOM1L1-221ENST00000575882 PRR5LQ6MZQ0 368 aa18.83■□□□□ 0.61
TOM1L1-221ENST00000575882 DDX42Q86XP3 938 aaKnown RBP eCLIP18.83■□□□□ 0.61
TOM1L1-221ENST00000575882 SUGP1Q8IWZ8 645 aaKnown RBP18.83■□□□□ 0.61
TOM1L1-221ENST00000575882 EIF1ADQ8N9N8 165 aaKnown RBP18.83■□□□□ 0.61
TOM1L1-221ENST00000575882 PROCA1Q8NCQ7 364 aaPredicted RBP18.83■□□□□ 0.61
TOM1L1-221ENST00000575882 ZNF473Q8WTR7 871 aaKnown RBP18.83■□□□□ 0.61
TOM1L1-221ENST00000575882 ANO3Q9BYT9 981 aa18.83■□□□□ 0.61
TOM1L1-221ENST00000575882 POLLQ9UGP5 575 aa18.83■□□□□ 0.61
TOM1L1-221ENST00000575882 TRAF3IP3Q9Y228 551 aa18.83■□□□□ 0.61
TOM1L1-221ENST00000575882 FOCADQ5VW36 1801 aa18.83■□□□□ 0.61
TOM1L1-221ENST00000575882 F8W031 263 aaPredicted RBP18.83■□□□□ 0.6
TOM1L1-221ENST00000575882 PGRMC1O00264 195 aaKnown RBP18.83■□□□□ 0.6
TOM1L1-221ENST00000575882 MPHOSPH10O00566 681 aaKnown RBP18.83■□□□□ 0.6
TOM1L1-221ENST00000575882 HPDP32754 393 aaPredicted RBP18.83■□□□□ 0.6
TOM1L1-221ENST00000575882 SEC24CP53992 1094 aa18.83■□□□□ 0.6
TOM1L1-221ENST00000575882 GIT2Q14161 759 aa18.83■□□□□ 0.6
TOM1L1-221ENST00000575882 KNOP1Q1ED39 458 aaKnown RBP18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 160 ms