RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 CAPN15O75808 1086 aa16.31■□□□□ 0.2
NPLOC4-218ENST00000574964 MARCKSP29966 332 aaPredicted RBP16.31■□□□□ 0.2
NPLOC4-218ENST00000574964 MNX1P50219 401 aaPredicted RBP16.31■□□□□ 0.2
NPLOC4-218ENST00000574964 FXR2P51116 673 aaKnown RBP eCLIP16.31■□□□□ 0.2
NPLOC4-218ENST00000574964 ATN1P54259 1190 aaPredicted RBP16.31■□□□□ 0.2
NPLOC4-218ENST00000574964 PSMC6P62333 389 aa16.31■□□□□ 0.2
NPLOC4-218ENST00000574964 KRT85P78386 507 aa16.31■□□□□ 0.2
NPLOC4-218ENST00000574964 MFSD10Q14728 455 aa16.31■□□□□ 0.2
NPLOC4-218ENST00000574964 KIAA0753Q2KHM9 967 aa16.31■□□□□ 0.2
NPLOC4-218ENST00000574964 FAM47CQ5HY64 1035 aa16.31■□□□□ 0.2
NPLOC4-218ENST00000574964 PDXDC2PQ6P474 469 aa16.31■□□□□ 0.2
NPLOC4-218ENST00000574964 B3GNT9Q6UX72 402 aa16.31■□□□□ 0.2
NPLOC4-218ENST00000574964 CCDC60Q8IWA6 550 aaPredicted RBP16.31■□□□□ 0.2
NPLOC4-218ENST00000574964 TNPO1Q92973 898 aaKnown RBP16.31■□□□□ 0.2
NPLOC4-218ENST00000574964 C16orf70Q9BSU1 422 aa16.31■□□□□ 0.2
NPLOC4-218ENST00000574964 LRWD1Q9UFC0 647 aa16.31■□□□□ 0.2
NPLOC4-218ENST00000574964 F2P00734 622 aa16.3■□□□□ 0.2
NPLOC4-218ENST00000574964 MARK3P27448 753 aa16.3■□□□□ 0.2
NPLOC4-218ENST00000574964 NASPP49321 788 aaPredicted RBP16.3■□□□□ 0.2
NPLOC4-218ENST00000574964 ITGA7Q13683 1181 aa16.3■□□□□ 0.2
NPLOC4-218ENST00000574964 PDIA5Q14554 519 aa16.3■□□□□ 0.2
NPLOC4-218ENST00000574964 SLC39A14Q15043 492 aa16.3■□□□□ 0.2
NPLOC4-218ENST00000574964 PTPAQ15257 358 aa16.3■□□□□ 0.2
NPLOC4-218ENST00000574964 PLPPR4Q7Z2D5 763 aa16.3■□□□□ 0.2
NPLOC4-218ENST00000574964 TRMT1LQ7Z2T5 733 aaKnown RBP16.3■□□□□ 0.2
NPLOC4-218ENST00000574964 KAT2BQ92831 832 aa16.3■□□□□ 0.2
NPLOC4-218ENST00000574964 ATP6V0A1Q93050 837 aa16.3■□□□□ 0.2
NPLOC4-218ENST00000574964 STK24Q9Y6E0 443 aa16.3■□□□□ 0.2
NPLOC4-218ENST00000574964 LOXHD1Q8IVV2 1947 aa16.29■□□□□ 0.2
NPLOC4-218ENST00000574964 IGKV6D-21A0A0A0MT36 114 aa16.29■□□□□ 0.2
NPLOC4-218ENST00000574964 SPTLC2O15270 562 aa16.29■□□□□ 0.2
NPLOC4-218ENST00000574964 YEATS4O95619 227 aa16.29■□□□□ 0.2
NPLOC4-218ENST00000574964 P4HBP07237 508 aaKnown RBP16.29■□□□□ 0.2
NPLOC4-218ENST00000574964 COL6A1P12109 1028 aa16.29■□□□□ 0.2
NPLOC4-218ENST00000574964 SLC26A2P50443 739 aa16.29■□□□□ 0.2
NPLOC4-218ENST00000574964 CYP4A11Q02928 519 aa16.29■□□□□ 0.2
NPLOC4-218ENST00000574964 SPIRE1Q08AE8 756 aa16.29■□□□□ 0.2
NPLOC4-218ENST00000574964 NBPF20Q3BBV1 942 aa16.29■□□□□ 0.2
NPLOC4-218ENST00000574964 HAUS3Q68CZ6 603 aa16.29■□□□□ 0.2
NPLOC4-218ENST00000574964 SLC39A5Q6ZMH5 540 aa16.29■□□□□ 0.2
NPLOC4-218ENST00000574964 C7orf31Q8N865 590 aa16.29■□□□□ 0.2
NPLOC4-218ENST00000574964 LINC00301Q8NCQ3 95 aa16.29■□□□□ 0.2
NPLOC4-218ENST00000574964 BANK1Q8NDB2 785 aa16.29■□□□□ 0.2
NPLOC4-218ENST00000574964 NEK9Q8TD19 979 aa16.29■□□□□ 0.2
NPLOC4-218ENST00000574964 AFAP1L1Q8TED9 768 aa16.29■□□□□ 0.2
NPLOC4-218ENST00000574964 DYDC2Q96IM9 177 aa16.29■□□□□ 0.2
NPLOC4-218ENST00000574964 PCYT2Q99447 389 aa16.29■□□□□ 0.2
NPLOC4-218ENST00000574964 EIF2AK1Q9BQI3 630 aaKnown RBP16.29■□□□□ 0.2
NPLOC4-218ENST00000574964 SEZ6LQ9BYH1 1024 aa16.29■□□□□ 0.2
NPLOC4-218ENST00000574964 TRPC6Q9Y210 931 aa16.29■□□□□ 0.2
NPLOC4-218ENST00000574964 ARVCFO00192 962 aa16.28■□□□□ 0.2
NPLOC4-218ENST00000574964 QARSP47897 775 aaKnown RBP16.28■□□□□ 0.2
NPLOC4-218ENST00000574964 PSMC5P62195 406 aa16.28■□□□□ 0.2
NPLOC4-218ENST00000574964 CTTNQ14247 550 aaKnown RBP16.28■□□□□ 0.2
NPLOC4-218ENST00000574964 KRT79Q5XKE5 535 aa16.28■□□□□ 0.2
NPLOC4-218ENST00000574964 TPH2Q8IWU9 490 aa16.28■□□□□ 0.2
NPLOC4-218ENST00000574964 PPP1R13LQ8WUF5 828 aa16.28■□□□□ 0.2
NPLOC4-218ENST00000574964 FAM167AQ96KS9 214 aa16.28■□□□□ 0.2
NPLOC4-218ENST00000574964 SPATA32Q96LK8 384 aa16.28■□□□□ 0.2
NPLOC4-218ENST00000574964 HTATIP2Q9BUP3 242 aa16.28■□□□□ 0.2
NPLOC4-218ENST00000574964 NRBP2Q9NSY0 501 aa16.28■□□□□ 0.2
NPLOC4-218ENST00000574964 RGL1Q9NZL6 768 aa16.28■□□□□ 0.2
NPLOC4-218ENST00000574964 MAFBQ9Y5Q3 323 aaPredicted RBP16.28■□□□□ 0.2
NPLOC4-218ENST00000574964 ALPK3Q96L96 1907 aa16.27■□□□□ 0.2
NPLOC4-218ENST00000574964 MROH7Q68CQ1 1323 aa16.27■□□□□ 0.2
NPLOC4-218ENST00000574964 IGSF9BQ9UPX0 1349 aa16.27■□□□□ 0.2
NPLOC4-218ENST00000574964 POTEB3A0JP26 581 aa16.27■□□□□ 0.2
NPLOC4-218ENST00000574964 HAS3O00219 553 aa16.27■□□□□ 0.2
NPLOC4-218ENST00000574964 LONP1P36776 959 aaKnown RBP16.27■□□□□ 0.2
NPLOC4-218ENST00000574964 CCT6AP40227 531 aaKnown RBP16.27■□□□□ 0.2
NPLOC4-218ENST00000574964 PLCB4Q15147 1175 aa16.27■□□□□ 0.2
NPLOC4-218ENST00000574964 ZRSR1Q15695 479 aaKnown RBP16.27■□□□□ 0.2
NPLOC4-218ENST00000574964 IL17AQ16552 155 aa16.27■□□□□ 0.2
NPLOC4-218ENST00000574964 NFRKBQ6P4R8 1299 aa16.27■□□□□ 0.2
NPLOC4-218ENST00000574964 POTEBQ6S5H4 581 aa16.27■□□□□ 0.2
NPLOC4-218ENST00000574964 IGSF22Q8N9C0 903 aa16.27■□□□□ 0.2
NPLOC4-218ENST00000574964 KRI1Q8N9T8 703 aaKnown RBP16.27■□□□□ 0.2
NPLOC4-218ENST00000574964 RASSF8Q8NHQ8 419 aa16.27■□□□□ 0.2
NPLOC4-218ENST00000574964 KCNG4Q8TDN1 519 aa16.27■□□□□ 0.2
NPLOC4-218ENST00000574964 SNX29Q8TEQ0 813 aa16.27■□□□□ 0.2
NPLOC4-218ENST00000574964 AK8Q96MA6 479 aa16.27■□□□□ 0.2
NPLOC4-218ENST00000574964 LXNQ9BS40 222 aa16.27■□□□□ 0.2
NPLOC4-218ENST00000574964 RNPEPQ9H4A4 650 aa16.27■□□□□ 0.2
NPLOC4-218ENST00000574964 ZSWIM4Q9H7M6 989 aa16.27■□□□□ 0.2
NPLOC4-218ENST00000574964 HDAC6Q9UBN7 1215 aa16.27■□□□□ 0.2
NPLOC4-218ENST00000574964 NOD1Q9Y239 953 aa16.27■□□□□ 0.2
NPLOC4-218ENST00000574964 ATP11BQ9Y2G3 1177 aa16.27■□□□□ 0.2
NPLOC4-218ENST00000574964 SRPRBQ9Y5M8 271 aaKnown RBP16.27■□□□□ 0.2
NPLOC4-218ENST00000574964 DDX11L8A8MPP1 907 aa16.26■□□□□ 0.19
NPLOC4-218ENST00000574964 TLR3O15455 904 aaKnown RBP16.26■□□□□ 0.19
NPLOC4-218ENST00000574964 HBP1O60381 514 aa16.26■□□□□ 0.19
NPLOC4-218ENST00000574964 PPP6R2O75170 966 aa16.26■□□□□ 0.19
NPLOC4-218ENST00000574964 OATP04181 439 aa16.26■□□□□ 0.19
NPLOC4-218ENST00000574964 SMIM10L2AP0DMW4 78 aa16.26■□□□□ 0.19
NPLOC4-218ENST00000574964 SMIM10L2BP0DMW5 78 aa16.26■□□□□ 0.19
NPLOC4-218ENST00000574964 GNAT1P11488 350 aa16.26■□□□□ 0.19
NPLOC4-218ENST00000574964 UBA7P41226 1012 aa16.26■□□□□ 0.19
NPLOC4-218ENST00000574964 ME1P48163 572 aa16.26■□□□□ 0.19
NPLOC4-218ENST00000574964 RTP1P59025 263 aa16.26■□□□□ 0.19
NPLOC4-218ENST00000574964 PRKCEQ02156 737 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms