RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 ZNF839A8K0R7 811 aa5.06□□□□□ -1.6
HDGFL3-202ENST00000562702 CYP27B1O15528 508 aa5.06□□□□□ -1.6
HDGFL3-202ENST00000562702 GFRA1P56159 465 aa5.06□□□□□ -1.6
HDGFL3-202ENST00000562702 GNL2Q13823 731 aaKnown RBP5.06□□□□□ -1.6
HDGFL3-202ENST00000562702 RNF151Q2KHN1 245 aa5.06□□□□□ -1.6
HDGFL3-202ENST00000562702 CD276Q5ZPR3 534 aa5.06□□□□□ -1.6
HDGFL3-202ENST00000562702 LARP4BQ92615 738 aaKnown RBP5.06□□□□□ -1.6
HDGFL3-202ENST00000562702 SEC16BQ96JE7 1060 aa5.06□□□□□ -1.6
HDGFL3-202ENST00000562702 TACO1Q9BSH4 297 aaKnown RBP5.06□□□□□ -1.6
HDGFL3-202ENST00000562702 JAM3Q9BX67 310 aa5.06□□□□□ -1.6
HDGFL3-202ENST00000562702 PLA2G12BQ9BX93 195 aa5.06□□□□□ -1.6
HDGFL3-202ENST00000562702 ACBD3Q9H3P7 528 aa5.06□□□□□ -1.6
HDGFL3-202ENST00000562702 PUF60Q9UHX1 559 aaKnown RBP5.06□□□□□ -1.6
HDGFL3-202ENST00000562702 PTPN22Q9Y2R2 807 aa5.06□□□□□ -1.6
HDGFL3-202ENST00000562702 DMRT1Q9Y5R6 373 aa5.06□□□□□ -1.6
HDGFL3-202ENST00000562702 ESYT3A0FGR9 886 aa5.05□□□□□ -1.6
HDGFL3-202ENST00000562702 TBX1O43435 398 aa5.05□□□□□ -1.6
HDGFL3-202ENST00000562702 GNAT1P11488 350 aa5.05□□□□□ -1.6
HDGFL3-202ENST00000562702 ATXN1P54253 815 aaKnown RBP5.05□□□□□ -1.6
HDGFL3-202ENST00000562702 RRADP55042 308 aa5.05□□□□□ -1.6
HDGFL3-202ENST00000562702 OTOP3Q7RTS5 596 aa5.05□□□□□ -1.6
HDGFL3-202ENST00000562702 SGMS1Q86VZ5 419 aa5.05□□□□□ -1.6
HDGFL3-202ENST00000562702 ZNF808Q8N4W9 903 aaPredicted RBP5.05□□□□□ -1.6
HDGFL3-202ENST00000562702 TMEM145Q8NBT3 493 aa5.05□□□□□ -1.6
HDGFL3-202ENST00000562702 MICAL1Q8TDZ2 1067 aa5.05□□□□□ -1.6
HDGFL3-202ENST00000562702 KCTD13Q8WZ19 329 aa5.05□□□□□ -1.6
HDGFL3-202ENST00000562702 ZNF703Q9H7S9 590 aaPredicted RBP5.05□□□□□ -1.6
HDGFL3-202ENST00000562702 CAPN10Q9HC96 672 aa5.05□□□□□ -1.6
HDGFL3-202ENST00000562702 GPR27Q9NS67 375 aa5.05□□□□□ -1.6
HDGFL3-202ENST00000562702 GIT1Q9Y2X7 761 aa5.05□□□□□ -1.6
HDGFL3-202ENST00000562702 NPFFR2Q9Y5X5 522 aa5.05□□□□□ -1.6
HDGFL3-202ENST00000562702 TMEM191CA6NGB0 347 aa5.04□□□□□ -1.6
HDGFL3-202ENST00000562702 AGRPO00253 132 aa5.04□□□□□ -1.6
HDGFL3-202ENST00000562702 ARHGAP6O43182 974 aa5.04□□□□□ -1.6
HDGFL3-202ENST00000562702 TOP3AQ13472 1001 aaPredicted RBP5.04□□□□□ -1.6
HDGFL3-202ENST00000562702 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.04□□□□□ -1.6
HDGFL3-202ENST00000562702 VPS37DQ86XT2 251 aa5.04□□□□□ -1.6
HDGFL3-202ENST00000562702 THEMISQ8N1K5 641 aaPredicted RBP5.04□□□□□ -1.6
HDGFL3-202ENST00000562702 UHMK1Q8TAS1 419 aaKnown RBP5.04□□□□□ -1.6
HDGFL3-202ENST00000562702 VOPP1Q96AW1 172 aa5.04□□□□□ -1.6
HDGFL3-202ENST00000562702 ANAPC16Q96DE5 110 aa5.04□□□□□ -1.6
HDGFL3-202ENST00000562702 CLIP3Q96DZ5 547 aa5.04□□□□□ -1.6
HDGFL3-202ENST00000562702 PDGFDQ9GZP0 370 aaPredicted RBP5.04□□□□□ -1.6
HDGFL3-202ENST00000562702 NELFAQ9H3P2 528 aa5.04□□□□□ -1.6
HDGFL3-202ENST00000562702 TLR9Q9NR96 1032 aa5.04□□□□□ -1.6
HDGFL3-202ENST00000562702 FBXO10Q9UK96 956 aa5.04□□□□□ -1.6
HDGFL3-202ENST00000562702 PEX11BO96011 259 aa5.03□□□□□ -1.6
HDGFL3-202ENST00000562702 ETV4P43268 484 aa5.03□□□□□ -1.6
HDGFL3-202ENST00000562702 NFYCQ13952 458 aa5.03□□□□□ -1.6
HDGFL3-202ENST00000562702 SF1Q15637 639 aaKnown RBP5.03□□□□□ -1.6
HDGFL3-202ENST00000562702 WDR72Q3MJ13 1102 aa5.03□□□□□ -1.6
HDGFL3-202ENST00000562702 RSPO2Q6UXX9 243 aaPredicted RBP5.03□□□□□ -1.6
HDGFL3-202ENST00000562702 ADGRE4PQ86SQ3 457 aa5.03□□□□□ -1.6
HDGFL3-202ENST00000562702 SCUBE1Q8IWY4 988 aa5.03□□□□□ -1.6
HDGFL3-202ENST00000562702 AGAP2Q99490 1192 aa5.03□□□□□ -1.6
HDGFL3-202ENST00000562702 IGSF5Q9NSI5 407 aa5.03□□□□□ -1.6
HDGFL3-202ENST00000562702 DSEQ9UL01 958 aa5.03□□□□□ -1.6
HDGFL3-202ENST00000562702 IL18BPO95998 194 aa5.02□□□□□ -1.61
HDGFL3-202ENST00000562702 MSX2P35548 267 aaPredicted RBP5.02□□□□□ -1.61
HDGFL3-202ENST00000562702 ZC3H6P61129 1189 aaKnown RBP5.02□□□□□ -1.61
HDGFL3-202ENST00000562702 MAP4K2Q12851 820 aa5.02□□□□□ -1.61
HDGFL3-202ENST00000562702 CRHR2Q13324 411 aa5.02□□□□□ -1.61
HDGFL3-202ENST00000562702 SLC35F1Q5T1Q4 408 aa5.02□□□□□ -1.61
HDGFL3-202ENST00000562702 FNDC7Q5VTL7 733 aa5.02□□□□□ -1.61
HDGFL3-202ENST00000562702 RBM12BQ8IXT5 1001 aaKnown RBP5.02□□□□□ -1.61
HDGFL3-202ENST00000562702 ULK2Q8IYT8 1036 aa5.02□□□□□ -1.61
HDGFL3-202ENST00000562702 FAM169BQ8N8A8 192 aa5.02□□□□□ -1.61
HDGFL3-202ENST00000562702 NAF1Q96HR8 494 aaKnown RBP5.02□□□□□ -1.61
HDGFL3-202ENST00000562702 TTPALQ9BTX7 342 aa5.02□□□□□ -1.61
HDGFL3-202ENST00000562702 PLA2G3Q9NZ20 509 aa5.02□□□□□ -1.61
HDGFL3-202ENST00000562702 SUSD5O60279 629 aa5.01□□□□□ -1.61
HDGFL3-202ENST00000562702 LTFP02788 710 aa5.01□□□□□ -1.61
HDGFL3-202ENST00000562702 HMGCRP04035 888 aa5.01□□□□□ -1.61
HDGFL3-202ENST00000562702 ATF4P18848 351 aaPredicted RBP5.01□□□□□ -1.61
HDGFL3-202ENST00000562702 GRK2P25098 689 aa5.01□□□□□ -1.61
HDGFL3-202ENST00000562702 GRK3P35626 688 aa5.01□□□□□ -1.61
HDGFL3-202ENST00000562702 FOXL1Q12952 345 aa5.01□□□□□ -1.61
HDGFL3-202ENST00000562702 KIZQ2M2Z5 673 aa5.01□□□□□ -1.61
HDGFL3-202ENST00000562702 DENND5AQ6IQ26 1287 aa5.01□□□□□ -1.61
HDGFL3-202ENST00000562702 C6orf15Q6UXA7 325 aaPredicted RBP5.01□□□□□ -1.61
HDGFL3-202ENST00000562702 KCTD1Q719H9 257 aa5.01□□□□□ -1.61
HDGFL3-202ENST00000562702 FAM178BQ8IXR5 827 aa5.01□□□□□ -1.61
HDGFL3-202ENST00000562702 D2HGDHQ8N465 521 aa5.01□□□□□ -1.61
HDGFL3-202ENST00000562702 CDIP1Q9H305 208 aa5.01□□□□□ -1.61
HDGFL3-202ENST00000562702 ARHGAP28Q9P2N2 729 aa5.01□□□□□ -1.61
HDGFL3-202ENST00000562702 CAPN14A8MX76 684 aa5□□□□□ -1.61
HDGFL3-202ENST00000562702 DDAH1O94760 285 aa5□□□□□ -1.61
HDGFL3-202ENST00000562702 COL6A2P12110 1019 aa5□□□□□ -1.61
HDGFL3-202ENST00000562702 BMP5P22003 454 aa5□□□□□ -1.61
HDGFL3-202ENST00000562702 GRM7Q14831 915 aa5□□□□□ -1.61
HDGFL3-202ENST00000562702 NOLC1Q14978 699 aaKnown RBP eCLIP5□□□□□ -1.61
HDGFL3-202ENST00000562702 CSRP2Q16527 193 aa5□□□□□ -1.61
HDGFL3-202ENST00000562702 TNNI3KQ59H18 835 aa5□□□□□ -1.61
HDGFL3-202ENST00000562702 USP30Q70CQ3 517 aa5□□□□□ -1.61
HDGFL3-202ENST00000562702 CXXC5Q7LFL8 322 aaKnown RBP5□□□□□ -1.61
HDGFL3-202ENST00000562702 TMPRSS6Q8IU80 811 aa5□□□□□ -1.61
HDGFL3-202ENST00000562702 WDR48Q8TAF3 677 aa5□□□□□ -1.61
HDGFL3-202ENST00000562702 C1orf159Q96HA4 380 aa5□□□□□ -1.61
HDGFL3-202ENST00000562702 KCNJ15Q99712 375 aa5□□□□□ -1.61
HDGFL3-202ENST00000562702 TINF2Q9BSI4 451 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms