RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 CR1LQ2VPA4 569 aa2.38□□□□□ -2.03
HIF1A-212ENST00000557538 ANO4Q32M45 955 aa2.38□□□□□ -2.03
HIF1A-212ENST00000557538 B3GNT8Q7Z7M8 397 aa2.38□□□□□ -2.03
HIF1A-212ENST00000557538 C11orf74Q86VG3 221 aa2.38□□□□□ -2.03
HIF1A-212ENST00000557538 PAWRQ96IZ0 340 aaKnown RBP2.38□□□□□ -2.03
HIF1A-212ENST00000557538 ELF4Q99607 663 aaPredicted RBP2.38□□□□□ -2.03
HIF1A-212ENST00000557538 RGS17Q9UGC6 210 aaPredicted RBP2.38□□□□□ -2.03
HIF1A-212ENST00000557538 COQ6Q9Y2Z9 468 aa2.38□□□□□ -2.03
HIF1A-212ENST00000557538 PCDHA5Q9Y5H7 936 aa2.38□□□□□ -2.03
HIF1A-212ENST00000557538 PMS2P1A4D2B8 440 aa2.37□□□□□ -2.03
HIF1A-212ENST00000557538 PRKD3O94806 890 aa2.37□□□□□ -2.03
HIF1A-212ENST00000557538 ENO2P09104 434 aaPredicted RBP2.37□□□□□ -2.03
HIF1A-212ENST00000557538 U2AF1L5P0DN76 240 aaPredicted RBP2.37□□□□□ -2.03
HIF1A-212ENST00000557538 BCAR1P56945 870 aa2.37□□□□□ -2.03
HIF1A-212ENST00000557538 U2AF1Q01081 240 aaKnown RBP eCLIP2.37□□□□□ -2.033e-6■■■■□ 23.3
HIF1A-212ENST00000557538 ZNF174Q15697 407 aa2.37□□□□□ -2.03
HIF1A-212ENST00000557538 ATP13A4Q4VNC1 1196 aa2.37□□□□□ -2.03
HIF1A-212ENST00000557538 PTRH1Q86Y79 214 aaKnown RBP2.37□□□□□ -2.03
HIF1A-212ENST00000557538 TP53INP2Q8IXH6 220 aa2.37□□□□□ -2.03
HIF1A-212ENST00000557538 KIAA1958Q8N8K9 716 aa2.37□□□□□ -2.03
HIF1A-212ENST00000557538 DTX3Q8N9I9 347 aa2.37□□□□□ -2.03
HIF1A-212ENST00000557538 LEO1Q8WVC0 666 aaPredicted RBP2.37□□□□□ -2.03
HIF1A-212ENST00000557538 CHMP4CQ96CF2 233 aa2.37□□□□□ -2.03
HIF1A-212ENST00000557538 TMEM209Q96SK2 561 aa2.37□□□□□ -2.03
HIF1A-212ENST00000557538 JAM3Q9BX67 310 aa2.37□□□□□ -2.03
HIF1A-212ENST00000557538 BTBD2Q9BX70 525 aa2.37□□□□□ -2.03
HIF1A-212ENST00000557538 OSBPL6Q9BZF3 934 aa2.37□□□□□ -2.03
HIF1A-212ENST00000557538 CATSPERZQ9NTU4 200 aa2.37□□□□□ -2.03
HIF1A-212ENST00000557538 PALD1Q9ULE6 856 aa2.37□□□□□ -2.03
HIF1A-212ENST00000557538 ZNF503-AS2A6NEH8 195 aa2.37□□□□□ -2.03
HIF1A-212ENST00000557538 PTPN1P18031 435 aaKnown RBP2.37□□□□□ -2.03
HIF1A-212ENST00000557538 AKAP5P24588 427 aa2.37□□□□□ -2.03
HIF1A-212ENST00000557538 PAN2Q504Q3 1202 aaKnown RBP2.37□□□□□ -2.03
HIF1A-212ENST00000557538 BTBD8Q5XKL5 378 aa2.37□□□□□ -2.03
HIF1A-212ENST00000557538 ESRP1Q6NXG1 681 aaKnown RBP2.37□□□□□ -2.03
HIF1A-212ENST00000557538 LHFPL2Q6ZUX7 228 aa2.37□□□□□ -2.03
HIF1A-212ENST00000557538 PHYKPLQ8IUZ5 450 aa2.37□□□□□ -2.03
HIF1A-212ENST00000557538 TTLL6Q8N841 843 aa2.37□□□□□ -2.03
HIF1A-212ENST00000557538 IGDCC4Q8TDY8 1250 aa2.37□□□□□ -2.03
HIF1A-212ENST00000557538 RAX2Q96IS3 184 aa2.37□□□□□ -2.03
HIF1A-212ENST00000557538 C8orf48Q96LL4 319 aa2.37□□□□□ -2.03
HIF1A-212ENST00000557538 FMNL2Q96PY5 1086 aa2.37□□□□□ -2.03
HIF1A-212ENST00000557538 SPTLC3Q9NUV7 552 aa2.37□□□□□ -2.03
HIF1A-212ENST00000557538 MBD1Q9UIS9 605 aaPredicted RBP2.37□□□□□ -2.03
HIF1A-212ENST00000557538 TMPRSS11EQ9UL52 423 aa2.37□□□□□ -2.03
HIF1A-212ENST00000557538 DENND2AQ9ULE3 1009 aa2.37□□□□□ -2.03
HIF1A-212ENST00000557538 RWDD3Q9Y3V2 267 aa2.37□□□□□ -2.03
HIF1A-212ENST00000557538 FOXP2O15409 715 aa2.37□□□□□ -2.03
HIF1A-212ENST00000557538 KPNA6O60684 536 aa2.37□□□□□ -2.03
HIF1A-212ENST00000557538 RAB11FIP3O75154 756 aa2.37□□□□□ -2.03
HIF1A-212ENST00000557538 ABLIM3O94929 683 aa2.37□□□□□ -2.03
HIF1A-212ENST00000557538 ASGR2P07307 311 aa2.37□□□□□ -2.03
HIF1A-212ENST00000557538 GLDCP23378 1020 aa2.37□□□□□ -2.03
HIF1A-212ENST00000557538 GPR3P46089 330 aa2.37□□□□□ -2.03
HIF1A-212ENST00000557538 MTNR1BP49286 362 aa2.37□□□□□ -2.03
HIF1A-212ENST00000557538 GUCY2FP51841 1108 aa2.37□□□□□ -2.03
HIF1A-212ENST00000557538 PRR5P85299 388 aa2.37□□□□□ -2.03
HIF1A-212ENST00000557538 IRF9Q00978 393 aa2.37□□□□□ -2.03
HIF1A-212ENST00000557538 ALDH6A1Q02252 535 aaKnown RBP2.37□□□□□ -2.03
HIF1A-212ENST00000557538 MCL1Q07820 350 aa2.37□□□□□ -2.03
HIF1A-212ENST00000557538 PRR31Q5SQ13 230 aa2.37□□□□□ -2.03
HIF1A-212ENST00000557538 FYB2Q5VWT5 728 aa2.37□□□□□ -2.03
HIF1A-212ENST00000557538 BICRALQ6AI39 1079 aa2.37□□□□□ -2.03
HIF1A-212ENST00000557538 ZC3H14Q6PJT7 736 aaKnown RBP2.37□□□□□ -2.03
HIF1A-212ENST00000557538 KCNK18Q7Z418 384 aa2.37□□□□□ -2.03
HIF1A-212ENST00000557538 TEX2Q8IWB9 1127 aa2.37□□□□□ -2.03
HIF1A-212ENST00000557538 ASB15Q8WXK1 588 aa2.37□□□□□ -2.03
HIF1A-212ENST00000557538 GPR160Q9UJ42 338 aa2.37□□□□□ -2.03
HIF1A-212ENST00000557538 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.37□□□□□ -2.03
HIF1A-212ENST00000557538 A0A0A6YYJ9 748 aa2.36□□□□□ -2.03
HIF1A-212ENST00000557538 SH3D21A4FU49 640 aa2.36□□□□□ -2.03
HIF1A-212ENST00000557538 ZNF839A8K0R7 811 aa2.36□□□□□ -2.03
HIF1A-212ENST00000557538 ZNF891A8MT65 544 aaPredicted RBP2.36□□□□□ -2.03
HIF1A-212ENST00000557538 SLC27A2O14975 620 aa2.36□□□□□ -2.03
HIF1A-212ENST00000557538 MAFGO15525 162 aa2.36□□□□□ -2.03
HIF1A-212ENST00000557538 CUTAO60888 179 aa2.36□□□□□ -2.03
HIF1A-212ENST00000557538 HIP1RO75146 1068 aa2.36□□□□□ -2.03
HIF1A-212ENST00000557538 CFBP00751 764 aa2.36□□□□□ -2.03
HIF1A-212ENST00000557538 SRGAP2CP0DJJ0 459 aa2.36□□□□□ -2.03
HIF1A-212ENST00000557538 DNM2P50570 870 aa2.36□□□□□ -2.03
HIF1A-212ENST00000557538 NFATC3Q12968 1075 aa2.36□□□□□ -2.03
HIF1A-212ENST00000557538 FSTL4Q6MZW2 842 aa2.36□□□□□ -2.03
HIF1A-212ENST00000557538 KIAA1841Q6NSI8 718 aa2.36□□□□□ -2.03
HIF1A-212ENST00000557538 TEPPQ6URK8 271 aa2.36□□□□□ -2.03
HIF1A-212ENST00000557538 UBE2Q2Q8WVN8 375 aa2.36□□□□□ -2.03
HIF1A-212ENST00000557538 FBXO10Q9UK96 956 aa2.36□□□□□ -2.03
HIF1A-212ENST00000557538 THRAP3Q9Y2W1 955 aaKnown RBP2.36□□□□□ -2.03
HIF1A-212ENST00000557538 A0A1W2PQ27 194 aa2.36□□□□□ -2.03
HIF1A-212ENST00000557538 A0A1W2PQ64 194 aa2.36□□□□□ -2.03
HIF1A-212ENST00000557538 A0A1W2PQC6 194 aa2.36□□□□□ -2.03
HIF1A-212ENST00000557538 A0A1W2PQD8 194 aa2.36□□□□□ -2.03
HIF1A-212ENST00000557538 RASSF10A6NK89 507 aa2.36□□□□□ -2.03
HIF1A-212ENST00000557538 CNGA1P29973 690 aa2.36□□□□□ -2.03
HIF1A-212ENST00000557538 SART3Q15020 963 aaKnown RBP2.36□□□□□ -2.03
HIF1A-212ENST00000557538 CXorf57Q6NSI4 855 aaKnown RBP2.36□□□□□ -2.03
HIF1A-212ENST00000557538 CXorf67Q86X51 503 aaPredicted RBP2.36□□□□□ -2.03
HIF1A-212ENST00000557538 CLRN3Q8NCR9 226 aa2.36□□□□□ -2.03
HIF1A-212ENST00000557538 ATL2Q8NHH9 583 aa2.36□□□□□ -2.03
HIF1A-212ENST00000557538 AIFM3Q96NN9 605 aa2.36□□□□□ -2.03
HIF1A-212ENST00000557538 TRIM8Q9BZR9 551 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms