RNA–Protein interactions for RNA: ENST00000553999.5

HIF1A-206, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-206ENST00000553999 ARHGEF15O94989 841 aa23.45■■□□□ 1.34
HIF1A-206ENST00000553999 HERC6Q8IVU3 1022 aa23.45■■□□□ 1.34
HIF1A-206ENST00000553999 CRYGNQ8WXF5 182 aa23.45■■□□□ 1.34
HIF1A-206ENST00000553999 TUBE1Q9UJT0 475 aa23.45■■□□□ 1.34
HIF1A-206ENST00000553999 NRCAMQ92823 1304 aa23.44■■□□□ 1.34
HIF1A-206ENST00000553999 IPO5O00410 1097 aaKnown RBP23.44■■□□□ 1.34
HIF1A-206ENST00000553999 LGR5O75473 907 aa23.44■■□□□ 1.34
HIF1A-206ENST00000553999 CXCL10P02778 98 aa23.44■■□□□ 1.34
HIF1A-206ENST00000553999 CYP3A4P08684 503 aa23.44■■□□□ 1.34
HIF1A-206ENST00000553999 INSRRP14616 1297 aa23.44■■□□□ 1.34
HIF1A-206ENST00000553999 PLCB4Q15147 1175 aa23.44■■□□□ 1.34
HIF1A-206ENST00000553999 SPRED2Q7Z698 418 aa23.44■■□□□ 1.34
HIF1A-206ENST00000553999 DBF4BQ8NFT6 615 aa23.44■■□□□ 1.34
HIF1A-206ENST00000553999 ZBED2Q9BTP6 218 aa23.44■■□□□ 1.34
HIF1A-206ENST00000553999 TCEAL9Q9UHQ7 104 aa23.44■■□□□ 1.34
HIF1A-206ENST00000553999 PCDHA11Q9Y5I1 949 aa23.44■■□□□ 1.34
HIF1A-206ENST00000553999 BAIAP3O94812 1187 aa23.43■■□□□ 1.34
HIF1A-206ENST00000553999 IGFBP4P22692 258 aa23.43■■□□□ 1.34
HIF1A-206ENST00000553999 STAT5BP51692 787 aa23.43■■□□□ 1.34
HIF1A-206ENST00000553999 ANAPC15P60006 121 aa23.43■■□□□ 1.34
HIF1A-206ENST00000553999 ADAM17P78536 824 aa23.43■■□□□ 1.34
HIF1A-206ENST00000553999 TMEM62Q0P6H9 643 aa23.43■■□□□ 1.34
HIF1A-206ENST00000553999 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.43■■□□□ 1.34
HIF1A-206ENST00000553999 NIPA1Q7RTP0 329 aa23.43■■□□□ 1.34
HIF1A-206ENST00000553999 CCDC60Q8IWA6 550 aaPredicted RBP23.43■■□□□ 1.34
HIF1A-206ENST00000553999 TEX2Q8IWB9 1127 aa23.43■■□□□ 1.34
HIF1A-206ENST00000553999 BLIDQ8IZY5 108 aa23.43■■□□□ 1.34
HIF1A-206ENST00000553999 TBCKQ8TEA7 893 aa23.43■■□□□ 1.34
HIF1A-206ENST00000553999 DNAJB3Q8WWF6 145 aa23.43■■□□□ 1.34
HIF1A-206ENST00000553999 SH3GLB2Q9NR46 395 aa23.43■■□□□ 1.34
HIF1A-206ENST00000553999 PCDHA4Q9UN74 947 aa23.43■■□□□ 1.34
HIF1A-206ENST00000553999 PTPRSQ13332 1948 aa23.42■■□□□ 1.34
HIF1A-206ENST00000553999 LCHNA4D1U4 455 aa23.42■■□□□ 1.34
HIF1A-206ENST00000553999 RFXAPO00287 272 aa23.42■■□□□ 1.34
HIF1A-206ENST00000553999 DHX15O43143 795 aaKnown RBP23.42■■□□□ 1.34
HIF1A-206ENST00000553999 CHMP2AO43633 222 aa23.42■■□□□ 1.34
HIF1A-206ENST00000553999 PFKFB2O60825 505 aa23.42■■□□□ 1.34
HIF1A-206ENST00000553999 TDP2O95551 362 aa23.42■■□□□ 1.34
HIF1A-206ENST00000553999 NEK4P51957 841 aa23.42■■□□□ 1.34
HIF1A-206ENST00000553999 IKBKEQ14164 716 aa23.42■■□□□ 1.34
HIF1A-206ENST00000553999 SAMM50Q9Y512 469 aa23.42■■□□□ 1.34
HIF1A-206ENST00000553999 TLL1O43897 1013 aa23.41■■□□□ 1.34
HIF1A-206ENST00000553999 CDKL5O76039 1030 aa23.41■■□□□ 1.34
HIF1A-206ENST00000553999 PARNO95453 639 aaKnown RBP23.41■■□□□ 1.34
HIF1A-206ENST00000553999 CTDNEP1O95476 244 aa23.41■■□□□ 1.34
HIF1A-206ENST00000553999 GHRP10912 638 aa23.41■■□□□ 1.34
HIF1A-206ENST00000553999 SETQ01105 290 aaPredicted RBP23.41■■□□□ 1.34
HIF1A-206ENST00000553999 MARCH8Q5T0T0 291 aa23.41■■□□□ 1.34
HIF1A-206ENST00000553999 MCTP2Q6DN12 878 aa23.41■■□□□ 1.34
HIF1A-206ENST00000553999 SWSAP1Q6NVH7 229 aa23.41■■□□□ 1.34
HIF1A-206ENST00000553999 CKAP2LQ8IYA6 745 aa23.41■■□□□ 1.34
HIF1A-206ENST00000553999 MYOCDQ8IZQ8 938 aa23.41■■□□□ 1.34
HIF1A-206ENST00000553999 MICALL1Q8N3F8 863 aa23.41■■□□□ 1.34
HIF1A-206ENST00000553999 GAS2L1Q99501 681 aaPredicted RBP23.41■■□□□ 1.34
HIF1A-206ENST00000553999 ZNF302Q9NR11 478 aa23.41■■□□□ 1.34
HIF1A-206ENST00000553999 POTEB3A0JP26 581 aa23.4■■□□□ 1.34
HIF1A-206ENST00000553999 EDIL3O43854 480 aa23.4■■□□□ 1.34
HIF1A-206ENST00000553999 CHRNA1P02708 482 aa23.4■■□□□ 1.34
HIF1A-206ENST00000553999 CCDC85BQ15834 202 aaPredicted RBP23.4■■□□□ 1.34
HIF1A-206ENST00000553999 ME3Q16798 604 aa23.4■■□□□ 1.34
HIF1A-206ENST00000553999 MIS18BP1Q6P0N0 1132 aa23.4■■□□□ 1.34
HIF1A-206ENST00000553999 PDXDC2PQ6P474 469 aa23.4■■□□□ 1.34
HIF1A-206ENST00000553999 POTEBQ6S5H4 581 aa23.4■■□□□ 1.34
HIF1A-206ENST00000553999 USP38Q8NB14 1042 aa23.4■■□□□ 1.34
HIF1A-206ENST00000553999 LENG9Q96B70 501 aa23.4■■□□□ 1.34
HIF1A-206ENST00000553999 PPP1R16BQ96T49 567 aa23.4■■□□□ 1.34
HIF1A-206ENST00000553999 ORC3Q9UBD5 711 aaPredicted RBP23.4■■□□□ 1.34
HIF1A-206ENST00000553999 ABHD14A-ACY1A0A1B0GW23 586 aa23.39■■□□□ 1.33
HIF1A-206ENST00000553999 KIF28PB7ZC32 967 aa23.39■■□□□ 1.33
HIF1A-206ENST00000553999 ADGRE1Q14246 886 aa23.39■■□□□ 1.33
HIF1A-206ENST00000553999 ANKRD1Q15327 319 aa23.39■■□□□ 1.33
HIF1A-206ENST00000553999 NPY5RQ15761 445 aa23.39■■□□□ 1.33
HIF1A-206ENST00000553999 INF2Q27J81 1249 aa23.39■■□□□ 1.33
HIF1A-206ENST00000553999 FAM160B1Q5W0V3 765 aa23.39■■□□□ 1.33
HIF1A-206ENST00000553999 ABHD15Q6UXT9 468 aa23.39■■□□□ 1.33
HIF1A-206ENST00000553999 ARNTL2Q8WYA1 636 aa23.39■■□□□ 1.33
HIF1A-206ENST00000553999 MTUS1Q9ULD2 1270 aa23.39■■□□□ 1.33
HIF1A-206ENST00000553999 CDY2AQ9Y6F7 541 aa23.39■■□□□ 1.33
HIF1A-206ENST00000553999 MSH4O15457 936 aa23.38■■□□□ 1.33
HIF1A-206ENST00000553999 JAK2O60674 1132 aa23.38■■□□□ 1.33
HIF1A-206ENST00000553999 UPP2O95045 317 aa23.38■■□□□ 1.33
HIF1A-206ENST00000553999 PLEKHG4Q58EX7 1191 aa23.38■■□□□ 1.33
HIF1A-206ENST00000553999 TAF2Q6P1X5 1199 aa23.38■■□□□ 1.33
HIF1A-206ENST00000553999 OXER1Q8TDS5 423 aa23.38■■□□□ 1.33
HIF1A-206ENST00000553999 SEPT8Q92599 483 aa23.38■■□□□ 1.33
HIF1A-206ENST00000553999 EPOPA6NHQ4 379 aa23.37■■□□□ 1.33
HIF1A-206ENST00000553999 ATG7O95352 703 aa23.37■■□□□ 1.33
HIF1A-206ENST00000553999 IBSPP21815 317 aaPredicted RBP23.37■■□□□ 1.33
HIF1A-206ENST00000553999 CIITAP33076 1130 aa23.37■■□□□ 1.33
HIF1A-206ENST00000553999 PLPPR4Q7Z2D5 763 aa23.37■■□□□ 1.33
HIF1A-206ENST00000553999 RSPH3Q86UC2 560 aa23.37■■□□□ 1.33
HIF1A-206ENST00000553999 PHOSPHO2Q8TCD6 241 aa23.37■■□□□ 1.33
HIF1A-206ENST00000553999 IFIH1Q9BYX4 1025 aaKnown RBP23.37■■□□□ 1.33
HIF1A-206ENST00000553999 TBC1D22BQ9NU19 505 aa23.37■■□□□ 1.33
HIF1A-206ENST00000553999 GABBR1Q9UBS5 961 aa23.37■■□□□ 1.33
HIF1A-206ENST00000553999 GINS2Q9Y248 185 aa23.37■■□□□ 1.33
HIF1A-206ENST00000553999 KAT6AQ92794 2004 aa23.37■■□□□ 1.33
HIF1A-206ENST00000553999 STK36Q9NRP7 1315 aa23.36■■□□□ 1.33
HIF1A-206ENST00000553999 MBLAC1A4D2B0 266 aaPredicted RBP23.36■■□□□ 1.33
HIF1A-206ENST00000553999 FAM205CA6NFA0 338 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms