RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 SLC17A8Q8NDX2 589 aa12.14□□□□□ -0.47
PABPN1-203ENST00000553960 SCFD2Q8WU76 684 aa12.14□□□□□ -0.47
PABPN1-203ENST00000553960 SOCS4Q8WXH5 440 aa12.14□□□□□ -0.47
PABPN1-203ENST00000553960 DDX12PQ92771 950 aa12.14□□□□□ -0.47
PABPN1-203ENST00000553960 ATP6V0A1Q93050 837 aa12.14□□□□□ -0.47
PABPN1-203ENST00000553960 ST6GALNAC4Q9H4F1 302 aa12.14□□□□□ -0.47
PABPN1-203ENST00000553960 C17orf75Q9HAS0 396 aa12.14□□□□□ -0.47
PABPN1-203ENST00000553960 JPH1Q9HDC5 661 aaPredicted RBP12.14□□□□□ -0.47
PABPN1-203ENST00000553960 SLC9A2Q9UBY0 812 aa12.14□□□□□ -0.47
PABPN1-203ENST00000553960 TCEAL9Q9UHQ7 104 aa12.14□□□□□ -0.47
PABPN1-203ENST00000553960 RWDD2AQ9UIY3 292 aa12.14□□□□□ -0.47
PABPN1-203ENST00000553960 DDX41Q9UJV9 622 aaKnown RBP12.14□□□□□ -0.47
PABPN1-203ENST00000553960 PCDHA2Q9Y5H9 948 aa12.14□□□□□ -0.47
PABPN1-203ENST00000553960 MAFBQ9Y5Q3 323 aaPredicted RBP12.14□□□□□ -0.47
PABPN1-203ENST00000553960 IVNS1ABPQ9Y6Y0 642 aa12.14□□□□□ -0.47
PABPN1-203ENST00000553960 CASP8AP2Q9UKL3 1982 aa12.14□□□□□ -0.47
PABPN1-203ENST00000553960 DOCK3Q8IZD9 2030 aa12.13□□□□□ -0.47
PABPN1-203ENST00000553960 LGR5O75473 907 aa12.13□□□□□ -0.47
PABPN1-203ENST00000553960 STBD1O95210 358 aa12.13□□□□□ -0.47
PABPN1-203ENST00000553960 PSAPP07602 524 aa12.13□□□□□ -0.47
PABPN1-203ENST00000553960 MYCLP12524 364 aaPredicted RBP12.13□□□□□ -0.47
PABPN1-203ENST00000553960 ADORA2AP29274 412 aa12.13□□□□□ -0.47
PABPN1-203ENST00000553960 CDC25BP30305 580 aa12.13□□□□□ -0.47
PABPN1-203ENST00000553960 ABCD1P33897 745 aa12.13□□□□□ -0.47
PABPN1-203ENST00000553960 AFMP43652 599 aa12.13□□□□□ -0.47
PABPN1-203ENST00000553960 UBXN2AP68543 259 aa12.13□□□□□ -0.47
PABPN1-203ENST00000553960 NKX3-2P78367 333 aa12.13□□□□□ -0.47
PABPN1-203ENST00000553960 MCM6Q14566 821 aa12.13□□□□□ -0.47
PABPN1-203ENST00000553960 TAF1CQ15572 869 aaPredicted RBP12.13□□□□□ -0.47
PABPN1-203ENST00000553960 BMT2Q1RMZ1 405 aa12.13□□□□□ -0.47
PABPN1-203ENST00000553960 KMT5BQ4FZB7 885 aa12.13□□□□□ -0.47
PABPN1-203ENST00000553960 HS1BP3Q53T59 392 aa12.13□□□□□ -0.47
PABPN1-203ENST00000553960 NCAPH2Q6IBW4 605 aa12.13□□□□□ -0.47
PABPN1-203ENST00000553960 CENPPQ6IPU0 288 aa12.13□□□□□ -0.47
PABPN1-203ENST00000553960 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.13□□□□□ -0.47
PABPN1-203ENST00000553960 CCDC65Q8IXS2 484 aa12.13□□□□□ -0.47
PABPN1-203ENST00000553960 ANKRD13CQ8N6S4 541 aa12.13□□□□□ -0.47
PABPN1-203ENST00000553960 RASSF8Q8NHQ8 419 aa12.13□□□□□ -0.47
PABPN1-203ENST00000553960 LXNQ9BS40 222 aa12.13□□□□□ -0.47
PABPN1-203ENST00000553960 HSD3B7Q9H2F3 369 aa12.13□□□□□ -0.47
PABPN1-203ENST00000553960 EFCC1Q9HA90 598 aa12.13□□□□□ -0.47
PABPN1-203ENST00000553960 PDLIM7Q9NR12 457 aa12.13□□□□□ -0.47
PABPN1-203ENST00000553960 UBE4BO95155 1302 aa12.12□□□□□ -0.47
PABPN1-203ENST00000553960 EMSYQ7Z589 1322 aa12.12□□□□□ -0.47
PABPN1-203ENST00000553960 MCM3APO60318 1980 aa12.12□□□□□ -0.47
PABPN1-203ENST00000553960 COBLO75128 1261 aa12.12□□□□□ -0.47
PABPN1-203ENST00000553960 FARP2O94887 1054 aaPredicted RBP12.12□□□□□ -0.47
PABPN1-203ENST00000553960 APLP1P51693 650 aa12.12□□□□□ -0.47
PABPN1-203ENST00000553960 MAP2K5Q13163 448 aa12.12□□□□□ -0.47
PABPN1-203ENST00000553960 STIM1Q13586 685 aa12.12□□□□□ -0.47
PABPN1-203ENST00000553960 ALCAMQ13740 583 aa12.12□□□□□ -0.47
PABPN1-203ENST00000553960 GIT2Q14161 759 aa12.12□□□□□ -0.47
PABPN1-203ENST00000553960 DHX8Q14562 1220 aaKnown RBP12.12□□□□□ -0.47
PABPN1-203ENST00000553960 NFIL3Q16649 462 aa12.12□□□□□ -0.47
PABPN1-203ENST00000553960 SPATA1Q5VX52 437 aa12.12□□□□□ -0.47
PABPN1-203ENST00000553960 IQSEC1Q6DN90 963 aa12.12□□□□□ -0.47
PABPN1-203ENST00000553960 RINT1Q6NUQ1 792 aa12.12□□□□□ -0.47
PABPN1-203ENST00000553960 OTUD6AQ7L8S5 288 aa12.12□□□□□ -0.47
PABPN1-203ENST00000553960 PLPPR4Q7Z2D5 763 aa12.12□□□□□ -0.47
PABPN1-203ENST00000553960 ZC3H3Q8IXZ2 948 aaKnown RBP12.12□□□□□ -0.47
PABPN1-203ENST00000553960 EXOC8Q8IYI6 725 aa12.12□□□□□ -0.47
PABPN1-203ENST00000553960 NOC3LQ8WTT2 800 aaKnown RBP12.12□□□□□ -0.47
PABPN1-203ENST00000553960 ANP32BQ92688 251 aaKnown RBP12.12□□□□□ -0.47
PABPN1-203ENST00000553960 MRFAP1L1Q96HT8 127 aa12.12□□□□□ -0.47
PABPN1-203ENST00000553960 DYDC2Q96IM9 177 aa12.12□□□□□ -0.47
PABPN1-203ENST00000553960 PURBQ96QR8 312 aaKnown RBP12.12□□□□□ -0.47
PABPN1-203ENST00000553960 MED15Q96RN5 788 aa12.12□□□□□ -0.47
PABPN1-203ENST00000553960 NTPCRQ9BSD7 190 aaKnown RBP12.12□□□□□ -0.47
PABPN1-203ENST00000553960 NIFKQ9BYG3 293 aaKnown RBP12.12□□□□□ -0.47
PABPN1-203ENST00000553960 ABHD16BQ9H3Z7 469 aa12.12□□□□□ -0.47
PABPN1-203ENST00000553960 RGL1Q9NZL6 768 aa12.12□□□□□ -0.47
PABPN1-203ENST00000553960 GJD2Q9UKL4 321 aa12.12□□□□□ -0.47
PABPN1-203ENST00000553960 Q9Y3F1 56 aa12.12□□□□□ -0.47
PABPN1-203ENST00000553960 COL4A3BPQ9Y5P4 624 aa12.12□□□□□ -0.47
PABPN1-203ENST00000553960 MGAMO43451 1857 aa12.12□□□□□ -0.47
PABPN1-203ENST00000553960 BICDL2A1A5D9 508 aa12.11□□□□□ -0.47
PABPN1-203ENST00000553960 POTEFA5A3E0 1075 aa12.11□□□□□ -0.47
PABPN1-203ENST00000553960 PSMA7O14818 248 aa12.11□□□□□ -0.47
PABPN1-203ENST00000553960 EIF3DO15371 548 aaKnown RBP eCLIP12.11□□□□□ -0.47
PABPN1-203ENST00000553960 GNRH1P01148 92 aa12.11□□□□□ -0.47
PABPN1-203ENST00000553960 SUPT20HL2P0C7V6 817 aa12.11□□□□□ -0.47
PABPN1-203ENST00000553960 UBA1P22314 1058 aaKnown RBP12.11□□□□□ -0.47
PABPN1-203ENST00000553960 RARRES1P49788 294 aa12.11□□□□□ -0.47
PABPN1-203ENST00000553960 ACTR2P61160 394 aa12.11□□□□□ -0.47
PABPN1-203ENST00000553960 SNRPFP62306 86 aaKnown RBP12.11□□□□□ -0.47
PABPN1-203ENST00000553960 PSMC6P62333 389 aa12.11□□□□□ -0.47
PABPN1-203ENST00000553960 TPM4P67936 248 aa12.11□□□□□ -0.47
PABPN1-203ENST00000553960 SP2Q02086 613 aa12.11□□□□□ -0.47
PABPN1-203ENST00000553960 LRRC63Q05C16 580 aa12.11□□□□□ -0.47
PABPN1-203ENST00000553960 CCDC173Q0VFZ6 552 aa12.11□□□□□ -0.47
PABPN1-203ENST00000553960 TTLL4Q14679 1199 aa12.11□□□□□ -0.47
PABPN1-203ENST00000553960 XKR3Q5GH77 459 aa12.11□□□□□ -0.47
PABPN1-203ENST00000553960 CELF3Q5SZQ8 465 aaKnown RBP12.11□□□□□ -0.47
PABPN1-203ENST00000553960 CDKAL1Q5VV42 579 aa12.11□□□□□ -0.47
PABPN1-203ENST00000553960 TAPT1Q6NXT6 567 aa12.11□□□□□ -0.47
PABPN1-203ENST00000553960 MIS18BP1Q6P0N0 1132 aa12.11□□□□□ -0.47
PABPN1-203ENST00000553960 POTEGQ6S5H5 508 aa12.11□□□□□ -0.47
PABPN1-203ENST00000553960 PPP4R3CPQ6ZMV5 832 aa12.11□□□□□ -0.47
PABPN1-203ENST00000553960 ARMCX2Q7L311 632 aa12.11□□□□□ -0.47
PABPN1-203ENST00000553960 EPM2AIP1Q7L775 607 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms