RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 ARTNQ5T4W7 220 aa7.02□□□□□ -1.29
SYNE2-210ENST00000553455 TRIM48Q8IWZ4 208 aa7.02□□□□□ -1.29
SYNE2-210ENST00000553455 AHCYL2Q96HN2 611 aaKnown RBP7.02□□□□□ -1.29
SYNE2-210ENST00000553455 C16orf92Q96LL3 132 aa7.02□□□□□ -1.29
SYNE2-210ENST00000553455 TOPORSQ9NS56 1045 aaPredicted RBP7.02□□□□□ -1.29
SYNE2-210ENST00000553455 PLA2G2DQ9UNK4 145 aa7.02□□□□□ -1.29
SYNE2-210ENST00000553455 OAS3Q9Y6K5 1087 aaKnown RBP7.02□□□□□ -1.29
SYNE2-210ENST00000553455 FZD9O00144 591 aa7.01□□□□□ -1.29
SYNE2-210ENST00000553455 FBXO21O94952 628 aa7.01□□□□□ -1.29
SYNE2-210ENST00000553455 ZBTB7AO95365 584 aa7.01□□□□□ -1.29
SYNE2-210ENST00000553455 CYP17A1P05093 508 aa7.01□□□□□ -1.29
SYNE2-210ENST00000553455 LSP1P33241 339 aa7.01□□□□□ -1.29
SYNE2-210ENST00000553455 THBS2P35442 1172 aa7.01□□□□□ -1.29
SYNE2-210ENST00000553455 IARSP41252 1262 aaKnown RBP7.01□□□□□ -1.29
SYNE2-210ENST00000553455 MAPKAPK2P49137 400 aa7.01□□□□□ -1.29
SYNE2-210ENST00000553455 FNTBP49356 437 aa7.01□□□□□ -1.29
SYNE2-210ENST00000553455 FAPQ12884 760 aa7.01□□□□□ -1.29
SYNE2-210ENST00000553455 SLC9A5Q14940 896 aa7.01□□□□□ -1.29
SYNE2-210ENST00000553455 ABCB5Q2M3G0 1257 aa7.01□□□□□ -1.29
SYNE2-210ENST00000553455 PAN2Q504Q3 1202 aaKnown RBP7.01□□□□□ -1.29
SYNE2-210ENST00000553455 ATG4DQ86TL0 474 aaPredicted RBP7.01□□□□□ -1.29
SYNE2-210ENST00000553455 RASSF3Q86WH2 238 aa7.01□□□□□ -1.29
SYNE2-210ENST00000553455 MIB1Q86YT6 1006 aa7.01□□□□□ -1.29
SYNE2-210ENST00000553455 CMIPQ8IY22 773 aa7.01□□□□□ -1.29
SYNE2-210ENST00000553455 SLC6A17Q9H1V8 727 aa7.01□□□□□ -1.29
SYNE2-210ENST00000553455 BCAS3Q9H6U6 928 aa7.01□□□□□ -1.29
SYNE2-210ENST00000553455 C14orf119Q9NWQ9 140 aa7.01□□□□□ -1.29
SYNE2-210ENST00000553455 PRAMEF25A6NGN4 478 aa7□□□□□ -1.29
SYNE2-210ENST00000553455 FOXP2O15409 715 aa7□□□□□ -1.29
SYNE2-210ENST00000553455 MMEP08473 750 aa7□□□□□ -1.29
SYNE2-210ENST00000553455 TMEM253P0C7T8 217 aa7□□□□□ -1.29
SYNE2-210ENST00000553455 FAHP16930 419 aa7□□□□□ -1.29
SYNE2-210ENST00000553455 HERVK_113P62684 666 aa7□□□□□ -1.29
SYNE2-210ENST00000553455 YBX1P67809 324 aaKnown RBP7□□□□□ -1.29
SYNE2-210ENST00000553455 KLF1Q13351 362 aaPredicted RBP7□□□□□ -1.29
SYNE2-210ENST00000553455 EPHA7Q15375 998 aa7□□□□□ -1.29
SYNE2-210ENST00000553455 NFE2Q16621 373 aaPredicted RBP7□□□□□ -1.29
SYNE2-210ENST00000553455 FAM126BQ8IXS8 530 aa7□□□□□ -1.29
SYNE2-210ENST00000553455 ASB15Q8WXK1 588 aa7□□□□□ -1.29
SYNE2-210ENST00000553455 CHMP4CQ96CF2 233 aa7□□□□□ -1.29
SYNE2-210ENST00000553455 ZDHHC5Q9C0B5 715 aa7□□□□□ -1.29
SYNE2-210ENST00000553455 DBR1Q9UK59 544 aaKnown RBP7□□□□□ -1.29
SYNE2-210ENST00000553455 SCO2A0A1W2PP80 73 aa6.99□□□□□ -1.29
SYNE2-210ENST00000553455 OR14I1A6ND48 311 aa6.99□□□□□ -1.29
SYNE2-210ENST00000553455 CD40P25942 277 aa6.99□□□□□ -1.29
SYNE2-210ENST00000553455 RAB27AP51159 221 aa6.99□□□□□ -1.29
SYNE2-210ENST00000553455 PDCD1Q15116 288 aa6.99□□□□□ -1.29
SYNE2-210ENST00000553455 RTN4RL1Q86UN2 441 aaPredicted RBP6.99□□□□□ -1.29
SYNE2-210ENST00000553455 IRF2BP1Q8IU81 584 aa6.99□□□□□ -1.29
SYNE2-210ENST00000553455 FMNL3Q8IVF7 1028 aa6.99□□□□□ -1.29
SYNE2-210ENST00000553455 ZZZ3Q8IYH5 903 aa6.99□□□□□ -1.29
SYNE2-210ENST00000553455 RTF1Q92541 710 aaKnown RBP6.99□□□□□ -1.29
SYNE2-210ENST00000553455 FOXRED1Q96CU9 486 aaPredicted RBP6.99□□□□□ -1.29
SYNE2-210ENST00000553455 DTLQ9NZJ0 730 aa6.99□□□□□ -1.29
SYNE2-210ENST00000553455 BTBD7Q9P203 1132 aa6.99□□□□□ -1.29
SYNE2-210ENST00000553455 SPEF1Q9Y4P9 236 aa6.99□□□□□ -1.29
SYNE2-210ENST00000553455 SHTN1A0MZ66 631 aa6.98□□□□□ -1.29
SYNE2-210ENST00000553455 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.98□□□□□ -1.29
SYNE2-210ENST00000553455 AKAP10O43572 662 aa6.98□□□□□ -1.29
SYNE2-210ENST00000553455 KDM1AO60341 852 aa6.98□□□□□ -1.29
SYNE2-210ENST00000553455 MT-CO1P00395 513 aa6.98□□□□□ -1.29
SYNE2-210ENST00000553455 LRG1P02750 347 aa6.98□□□□□ -1.29
SYNE2-210ENST00000553455 GLI1P08151 1106 aa6.98□□□□□ -1.29
SYNE2-210ENST00000553455 FBLN1P23142 703 aa6.98□□□□□ -1.29
SYNE2-210ENST00000553455 PDE6BP35913 854 aa6.98□□□□□ -1.29
SYNE2-210ENST00000553455 LRRC41Q15345 812 aa6.98□□□□□ -1.29
SYNE2-210ENST00000553455 ZC3H14Q6PJT7 736 aaKnown RBP6.98□□□□□ -1.29
SYNE2-210ENST00000553455 ZBTB46Q86UZ6 589 aa6.98□□□□□ -1.29
SYNE2-210ENST00000553455 LMBR1Q8WVP7 490 aa6.98□□□□□ -1.29
SYNE2-210ENST00000553455 HOOK2Q96ED9 719 aa6.98□□□□□ -1.29
SYNE2-210ENST00000553455 ZNF496Q96IT1 587 aaPredicted RBP6.98□□□□□ -1.29
SYNE2-210ENST00000553455 SEMA4AQ9H3S1 761 aa6.98□□□□□ -1.29
SYNE2-210ENST00000553455 HSPBP1Q9NZL4 362 aa6.98□□□□□ -1.29
SYNE2-210ENST00000553455 NOC2LQ9Y3T9 749 aaKnown RBP6.98□□□□□ -1.29
SYNE2-210ENST00000553455 PAPLNO95428 1278 aa6.97□□□□□ -1.29
SYNE2-210ENST00000553455 MYBL2P10244 700 aa6.97□□□□□ -1.29
SYNE2-210ENST00000553455 AOAHP28039 575 aa6.97□□□□□ -1.29
SYNE2-210ENST00000553455 PIN1Q13526 163 aaPredicted RBP6.97□□□□□ -1.29
SYNE2-210ENST00000553455 MOGSQ13724 837 aa6.97□□□□□ -1.29
SYNE2-210ENST00000553455 PTPN21Q16825 1174 aa6.97□□□□□ -1.29
SYNE2-210ENST00000553455 FRMD7Q6ZUT3 714 aa6.97□□□□□ -1.29
SYNE2-210ENST00000553455 AMIGO3Q86WK7 504 aa6.97□□□□□ -1.29
SYNE2-210ENST00000553455 ZSWIM9Q86XI8 627 aa6.97□□□□□ -1.29
SYNE2-210ENST00000553455 PROSER1Q86XN7 944 aa6.97□□□□□ -1.29
SYNE2-210ENST00000553455 C1orf162Q8NEQ5 155 aaPredicted RBP6.97□□□□□ -1.29
SYNE2-210ENST00000553455 TSR2Q969E8 191 aaKnown RBP6.97□□□□□ -1.29
SYNE2-210ENST00000553455 FUBP3Q96I24 572 aaKnown RBP eCLIP6.97□□□□□ -1.29
SYNE2-210ENST00000553455 GBP4Q96PP9 640 aa6.97□□□□□ -1.29
SYNE2-210ENST00000553455 RTFDC1Q9BY42 306 aaPredicted RBP6.97□□□□□ -1.29
SYNE2-210ENST00000553455 ZFP64Q9NPA5 681 aa6.97□□□□□ -1.29
SYNE2-210ENST00000553455 WASHC2AQ641Q2 1341 aa6.97□□□□□ -1.29
SYNE2-210ENST00000553455 HRKO00198 91 aa6.96□□□□□ -1.3
SYNE2-210ENST00000553455 TSPAN6O43657 245 aa6.96□□□□□ -1.3
SYNE2-210ENST00000553455 H2AFYO75367 372 aaKnown RBP6.96□□□□□ -1.3
SYNE2-210ENST00000553455 MPIG6BO95866 241 aa6.96□□□□□ -1.3
SYNE2-210ENST00000553455 SCGB1D2O95969 90 aa6.96□□□□□ -1.3
SYNE2-210ENST00000553455 MC4RP32245 332 aa6.96□□□□□ -1.3
SYNE2-210ENST00000553455 STAT5AP42229 794 aa6.96□□□□□ -1.3
SYNE2-210ENST00000553455 GPR3P46089 330 aa6.96□□□□□ -1.3
SYNE2-210ENST00000553455 SCAND1P57086 179 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms