RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 PCDHGA8Q9Y5G5 932 aa7.79□□□□□ -1.16
TGFBR1-208ENST00000550253 PCDHGA7Q9Y5G6 932 aa7.79□□□□□ -1.16
TGFBR1-208ENST00000550253 PCDHGA6Q9Y5G7 932 aa7.79□□□□□ -1.16
TGFBR1-208ENST00000550253 PCDHGA3Q9Y5H0 932 aa7.79□□□□□ -1.16
TGFBR1-208ENST00000550253 PCDHGA2Q9Y5H1 932 aa7.79□□□□□ -1.16
TGFBR1-208ENST00000550253 BRWD3Q6RI45 1802 aa7.79□□□□□ -1.16
TGFBR1-208ENST00000550253 PPLO60437 1756 aa7.79□□□□□ -1.16
TGFBR1-208ENST00000550253 ATRNO75882 1429 aa7.79□□□□□ -1.16
TGFBR1-208ENST00000550253 GSTA4O15217 222 aa7.78□□□□□ -1.16
TGFBR1-208ENST00000550253 LTFP02788 710 aa7.78□□□□□ -1.16
TGFBR1-208ENST00000550253 LACTBP83111 547 aaPredicted RBP7.78□□□□□ -1.16
TGFBR1-208ENST00000550253 TNK2Q07912 1038 aa7.78□□□□□ -1.16
TGFBR1-208ENST00000550253 ARHGAP44Q17R89 818 aa7.78□□□□□ -1.16
TGFBR1-208ENST00000550253 Q6ZNB5 142 aa7.78□□□□□ -1.16
TGFBR1-208ENST00000550253 C22orf34Q6ZV56 151 aa7.78□□□□□ -1.16
TGFBR1-208ENST00000550253 PNMA8AQ86V59 439 aaPredicted RBP7.78□□□□□ -1.16
TGFBR1-208ENST00000550253 KSR1Q8IVT5 923 aa7.78□□□□□ -1.16
TGFBR1-208ENST00000550253 C2orf69Q8N8R5 385 aa7.78□□□□□ -1.16
TGFBR1-208ENST00000550253 PJA1Q8NG27 643 aa7.78□□□□□ -1.16
TGFBR1-208ENST00000550253 TCTN2Q96GX1 697 aa7.78□□□□□ -1.16
TGFBR1-208ENST00000550253 SCYL1Q96KG9 808 aa7.78□□□□□ -1.16
TGFBR1-208ENST00000550253 AIFM3Q96NN9 605 aa7.78□□□□□ -1.16
TGFBR1-208ENST00000550253 GPR62Q9BZJ7 368 aa7.78□□□□□ -1.16
TGFBR1-208ENST00000550253 CDIP1Q9H305 208 aa7.78□□□□□ -1.16
TGFBR1-208ENST00000550253 PPARGC1AQ9UBK2 798 aaKnown RBP7.78□□□□□ -1.16
TGFBR1-208ENST00000550253 BCL9LQ86UU0 1499 aa7.78□□□□□ -1.16
TGFBR1-208ENST00000550253 PTCH1Q13635 1447 aa7.78□□□□□ -1.16
TGFBR1-208ENST00000550253 MYOM2P54296 1465 aa7.78□□□□□ -1.16
TGFBR1-208ENST00000550253 PXDNQ92626 1479 aa7.78□□□□□ -1.16
TGFBR1-208ENST00000550253 TRIM75PA6NK02 468 aa7.78□□□□□ -1.16
TGFBR1-208ENST00000550253 PRR33A8MZF0 331 aa7.78□□□□□ -1.16
TGFBR1-208ENST00000550253 FAM47E-STBD1D6RA91 191 aa7.78□□□□□ -1.16
TGFBR1-208ENST00000550253 ZNF865P0CJ78 1059 aaPredicted RBP7.78□□□□□ -1.16
TGFBR1-208ENST00000550253 GLB1P16278 677 aa7.78□□□□□ -1.16
TGFBR1-208ENST00000550253 PDE6BP35913 854 aa7.78□□□□□ -1.16
TGFBR1-208ENST00000550253 SNRPNP63162 240 aaKnown RBP7.78□□□□□ -1.16
TGFBR1-208ENST00000550253 ST5P78524 1137 aa7.78□□□□□ -1.16
TGFBR1-208ENST00000550253 MORC3Q14149 939 aa7.78□□□□□ -1.16
TGFBR1-208ENST00000550253 LRRC32Q14392 662 aa7.78□□□□□ -1.16
TGFBR1-208ENST00000550253 GRIK4Q16099 956 aa7.78□□□□□ -1.16
TGFBR1-208ENST00000550253 RTP2Q5QGT7 225 aa7.78□□□□□ -1.16
TGFBR1-208ENST00000550253 MBLAC2Q68D91 279 aa7.78□□□□□ -1.16
TGFBR1-208ENST00000550253 APBB1IPQ7Z5R6 666 aaPredicted RBP7.78□□□□□ -1.16
TGFBR1-208ENST00000550253 CMIPQ8IY22 773 aa7.78□□□□□ -1.16
TGFBR1-208ENST00000550253 CISD2Q8N5K1 135 aaKnown RBP7.78□□□□□ -1.16
TGFBR1-208ENST00000550253 PIWIL2Q8TC59 973 aaKnown RBP7.78□□□□□ -1.16
TGFBR1-208ENST00000550253 PCDHA2Q9Y5H9 948 aa7.78□□□□□ -1.16
TGFBR1-208ENST00000550253 GLI3P10071 1580 aa7.77□□□□□ -1.17
TGFBR1-208ENST00000550253 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.77□□□□□ -1.17
TGFBR1-208ENST00000550253 GNB5O14775 395 aa7.77□□□□□ -1.17
TGFBR1-208ENST00000550253 ZNF205O95201 554 aa7.77□□□□□ -1.17
TGFBR1-208ENST00000550253 PAMP19021 973 aa7.77□□□□□ -1.17
TGFBR1-208ENST00000550253 GRK2P25098 689 aa7.77□□□□□ -1.17
TGFBR1-208ENST00000550253 GRK3P35626 688 aa7.77□□□□□ -1.17
TGFBR1-208ENST00000550253 GRM3Q14832 879 aa7.77□□□□□ -1.17
TGFBR1-208ENST00000550253 TERF2Q15554 542 aa7.77□□□□□ -1.17
TGFBR1-208ENST00000550253 CLEC16AQ2KHT3 1053 aa7.77□□□□□ -1.17
TGFBR1-208ENST00000550253 C10orf62Q5T681 223 aaPredicted RBP7.77□□□□□ -1.17
TGFBR1-208ENST00000550253 IL31Q6EBC2 164 aa7.77□□□□□ -1.17
TGFBR1-208ENST00000550253 HSPBAP1Q96EW2 488 aa7.77□□□□□ -1.17
TGFBR1-208ENST00000550253 HEXIM2Q96MH2 286 aaKnown RBP7.77□□□□□ -1.17
TGFBR1-208ENST00000550253 NUP88Q99567 741 aaPredicted RBP7.77□□□□□ -1.17
TGFBR1-208ENST00000550253 CAPN6Q9Y6Q1 641 aa7.77□□□□□ -1.17
TGFBR1-208ENST00000550253 ERC2O15083 957 aa7.76□□□□□ -1.17
TGFBR1-208ENST00000550253 ASGR2P07307 311 aa7.76□□□□□ -1.17
TGFBR1-208ENST00000550253 ZBTB48P10074 688 aaPredicted RBP7.76□□□□□ -1.17
TGFBR1-208ENST00000550253 MAP4P27816 1152 aaKnown RBP7.76□□□□□ -1.17
TGFBR1-208ENST00000550253 PODNQ7Z5L7 613 aa7.76□□□□□ -1.17
TGFBR1-208ENST00000550253 RASSF3Q86WH2 238 aa7.76□□□□□ -1.17
TGFBR1-208ENST00000550253 NEDD1Q8NHV4 660 aa7.76□□□□□ -1.17
TGFBR1-208ENST00000550253 LENG1Q96BZ8 264 aaPredicted RBP7.76□□□□□ -1.17
TGFBR1-208ENST00000550253 DUSP15Q9H1R2 295 aaPredicted RBP7.76□□□□□ -1.17
TGFBR1-208ENST00000550253 MKS1Q9NXB0 559 aa7.76□□□□□ -1.17
TGFBR1-208ENST00000550253 USP25Q9UHP3 1055 aa7.76□□□□□ -1.17
TGFBR1-208ENST00000550253 FBXL7Q9UJT9 491 aa7.76□□□□□ -1.17
TGFBR1-208ENST00000550253 USP21Q9UK80 565 aa7.76□□□□□ -1.17
TGFBR1-208ENST00000550253 RCAN3Q9UKA8 241 aa7.76□□□□□ -1.17
TGFBR1-208ENST00000550253 PRAG1Q86YV5 1406 aa7.76□□□□□ -1.17
TGFBR1-208ENST00000550253 NPHP3-ACAD11A0A0J9YXS1 232 aa7.75□□□□□ -1.17
TGFBR1-208ENST00000550253 FAM95CA0A1B0GW59 222 aa7.75□□□□□ -1.17
TGFBR1-208ENST00000550253 GSTM1P09488 218 aa7.75□□□□□ -1.17
TGFBR1-208ENST00000550253 FAM87AP0C7U9 286 aa7.75□□□□□ -1.17
TGFBR1-208ENST00000550253 BMP3P12645 472 aa7.75□□□□□ -1.17
TGFBR1-208ENST00000550253 GPR3P46089 330 aa7.75□□□□□ -1.17
TGFBR1-208ENST00000550253 NEK3P51956 506 aa7.75□□□□□ -1.17
TGFBR1-208ENST00000550253 PHC1P78364 1004 aa7.75□□□□□ -1.17
TGFBR1-208ENST00000550253 HTRA3P83110 453 aa7.75□□□□□ -1.17
TGFBR1-208ENST00000550253 GALEQ14376 348 aa7.75□□□□□ -1.17
TGFBR1-208ENST00000550253 UVSSAQ2YD98 709 aa7.75□□□□□ -1.17
TGFBR1-208ENST00000550253 USHBP1Q8N6Y0 703 aa7.75□□□□□ -1.17
TGFBR1-208ENST00000550253 PANK1Q8TE04 598 aa7.75□□□□□ -1.17
TGFBR1-208ENST00000550253 LMBR1Q8WVP7 490 aa7.75□□□□□ -1.17
TGFBR1-208ENST00000550253 MYRFLQ96LU7 910 aa7.75□□□□□ -1.17
TGFBR1-208ENST00000550253 TOPORSQ9NS56 1045 aaPredicted RBP7.75□□□□□ -1.17
TGFBR1-208ENST00000550253 CATSPERZQ9NTU4 200 aa7.75□□□□□ -1.17
TGFBR1-208ENST00000550253 TAGLN3Q9UI15 199 aa7.75□□□□□ -1.17
TGFBR1-208ENST00000550253 SPO11Q9Y5K1 396 aa7.75□□□□□ -1.17
TGFBR1-208ENST00000550253 CDC42BPGQ6DT37 1551 aa7.75□□□□□ -1.17
TGFBR1-208ENST00000550253 RGPD8O14715 1765 aaPredicted RBP7.75□□□□□ -1.17
TGFBR1-208ENST00000550253 IFT172Q9UG01 1749 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms