RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 THRAP3Q9Y2W1 955 aaKnown RBP11.1□□□□□ -0.63
SMARCC2-209ENST00000550164 K7ENM7 598 aa11.1□□□□□ -0.63
SMARCC2-209ENST00000550164 UBXN2AP68543 259 aa11.1□□□□□ -0.63
SMARCC2-209ENST00000550164 TRIP13Q15645 432 aaPredicted RBP11.1□□□□□ -0.63
SMARCC2-209ENST00000550164 PKN1Q16512 942 aa11.1□□□□□ -0.63
SMARCC2-209ENST00000550164 FAM98CQ17RN3 349 aaKnown RBP11.1□□□□□ -0.63
SMARCC2-209ENST00000550164 CYP4F22Q6NT55 531 aa11.1□□□□□ -0.63
SMARCC2-209ENST00000550164 PACS2Q86VP3 889 aa11.1□□□□□ -0.63
SMARCC2-209ENST00000550164 FBXO11Q86XK2 927 aa11.1□□□□□ -0.63
SMARCC2-209ENST00000550164 CEP95Q96GE4 821 aa11.1□□□□□ -0.63
SMARCC2-209ENST00000550164 RAD51CO43502 376 aa11.1□□□□□ -0.63
SMARCC2-209ENST00000550164 SARNPP82979 210 aaKnown RBP11.1□□□□□ -0.63
SMARCC2-209ENST00000550164 SEPT2Q15019 361 aa11.1□□□□□ -0.63
SMARCC2-209ENST00000550164 TTI2Q6NXR4 508 aa11.1□□□□□ -0.63
SMARCC2-209ENST00000550164 VPS52Q8N1B4 723 aa11.1□□□□□ -0.63
SMARCC2-209ENST00000550164 NSUN4Q96CB9 384 aaKnown RBP11.1□□□□□ -0.63
SMARCC2-209ENST00000550164 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.1□□□□□ -0.633e-7■■■□□ 18
SMARCC2-209ENST00000550164 PCIF1Q9H4Z3 704 aa11.1□□□□□ -0.63
SMARCC2-209ENST00000550164 FAM237AA0A1B0GTK4 181 aa11.09□□□□□ -0.63
SMARCC2-209ENST00000550164 GRID2IPA4D2P6 1211 aa11.09□□□□□ -0.63
SMARCC2-209ENST00000550164 USP17L15C9J2P7 530 aa11.09□□□□□ -0.63
SMARCC2-209ENST00000550164 USP17L13C9JLJ4 530 aa11.09□□□□□ -0.63
SMARCC2-209ENST00000550164 USP17L11C9JVI0 530 aa11.09□□□□□ -0.63
SMARCC2-209ENST00000550164 USP17L18D6R9N7 530 aa11.09□□□□□ -0.63
SMARCC2-209ENST00000550164 USP17L22D6RA61 530 aa11.09□□□□□ -0.63
SMARCC2-209ENST00000550164 USP17L17D6RBQ6 530 aa11.09□□□□□ -0.63
SMARCC2-209ENST00000550164 USP17L19D6RCP7 530 aa11.09□□□□□ -0.63
SMARCC2-209ENST00000550164 USP17L20D6RJB6 530 aa11.09□□□□□ -0.63
SMARCC2-209ENST00000550164 TTLL1O95922 423 aa11.09□□□□□ -0.63
SMARCC2-209ENST00000550164 SMTNP53814 917 aa11.09□□□□□ -0.63
SMARCC2-209ENST00000550164 HDLBPQ00341 1268 aaKnown RBP11.09□□□□□ -0.63
SMARCC2-209ENST00000550164 USP17L24Q0WX57 530 aa11.09□□□□□ -0.63
SMARCC2-209ENST00000550164 SLC18A3Q16572 532 aa11.09□□□□□ -0.63
SMARCC2-209ENST00000550164 GPATCH4Q5T3I0 446 aaKnown RBP11.09□□□□□ -0.63
SMARCC2-209ENST00000550164 USP17L6PQ6QN14 398 aa11.09□□□□□ -0.63
SMARCC2-209ENST00000550164 SFR1Q86XK3 245 aa11.09□□□□□ -0.63
SMARCC2-209ENST00000550164 THOC1Q96FV9 657 aaKnown RBP11.09□□□□□ -0.63
SMARCC2-209ENST00000550164 CEP63Q96MT8 703 aa11.09□□□□□ -0.63
SMARCC2-209ENST00000550164 ERGIC2Q96RQ1 377 aa11.09□□□□□ -0.63
SMARCC2-209ENST00000550164 C7orf25Q9BPX7 421 aa11.09□□□□□ -0.63
SMARCC2-209ENST00000550164 NBPF3Q9H094 633 aa11.09□□□□□ -0.63
SMARCC2-209ENST00000550164 AGTPBP1Q9UPW5 1226 aa11.09□□□□□ -0.63
SMARCC2-209ENST00000550164 STK24Q9Y6E0 443 aa11.09□□□□□ -0.63
SMARCC2-209ENST00000550164 KDM6AO15550 1401 aaPredicted RBP11.09□□□□□ -0.63
SMARCC2-209ENST00000550164 SSU72P8A0A1W2PR75 194 aa11.09□□□□□ -0.63
SMARCC2-209ENST00000550164 POC1B-GALNT4F8VUJ3 575 aa11.09□□□□□ -0.63
SMARCC2-209ENST00000550164 CCDC38Q502W7 563 aa11.09□□□□□ -0.63
SMARCC2-209ENST00000550164 TAB3Q8N5C8 712 aaPredicted RBP11.09□□□□□ -0.63
SMARCC2-209ENST00000550164 CCDC160A6NGH7 325 aa11.09□□□□□ -0.63
SMARCC2-209ENST00000550164 PHF20L1A8MW92 1017 aa11.09□□□□□ -0.63
SMARCC2-209ENST00000550164 ACTN1P12814 892 aa11.09□□□□□ -0.63
SMARCC2-209ENST00000550164 ATF2P15336 505 aa11.09□□□□□ -0.63
SMARCC2-209ENST00000550164 PPP2R5AQ15172 486 aa11.09□□□□□ -0.63
SMARCC2-209ENST00000550164 SEC23AQ15436 765 aa11.09□□□□□ -0.63
SMARCC2-209ENST00000550164 LIN9Q5TKA1 542 aa11.09□□□□□ -0.63
SMARCC2-209ENST00000550164 TMED8Q6PL24 325 aaPredicted RBP11.09□□□□□ -0.63
SMARCC2-209ENST00000550164 CPXCR1Q8N123 301 aa11.09□□□□□ -0.63
SMARCC2-209ENST00000550164 SERPINB13Q9UIV8 391 aa11.09□□□□□ -0.63
SMARCC2-209ENST00000550164 POTEFA5A3E0 1075 aa11.08□□□□□ -0.64
SMARCC2-209ENST00000550164 POTEIP0CG38 1075 aa11.08□□□□□ -0.64
SMARCC2-209ENST00000550164 ATP2A2P16615 1042 aaKnown RBP11.08□□□□□ -0.64
SMARCC2-209ENST00000550164 POTEGQ6S5H5 508 aa11.08□□□□□ -0.64
SMARCC2-209ENST00000550164 POTEEQ6S8J3 1075 aa11.08□□□□□ -0.64
SMARCC2-209ENST00000550164 SPICE1Q8N0Z3 855 aa11.08□□□□□ -0.64
SMARCC2-209ENST00000550164 MARCH10Q8NA82 808 aaPredicted RBP11.08□□□□□ -0.64
SMARCC2-209ENST00000550164 ZNF653Q96CK0 615 aa11.08□□□□□ -0.64
SMARCC2-209ENST00000550164 UBE2TQ9NPD8 197 aaPredicted RBP11.08□□□□□ -0.64
SMARCC2-209ENST00000550164 LARSQ9P2J5 1176 aaKnown RBP11.08□□□□□ -0.64
SMARCC2-209ENST00000550164 SRP68Q9UHB9 627 aaKnown RBP11.08□□□□□ -0.64
SMARCC2-209ENST00000550164 TTI1O43156 1089 aa11.08□□□□□ -0.64
SMARCC2-209ENST00000550164 SGO2Q562F6 1265 aa11.08□□□□□ -0.64
SMARCC2-209ENST00000550164 RBM26Q5T8P6 1007 aaKnown RBP11.08□□□□□ -0.64
SMARCC2-209ENST00000550164 ANKRD20A3Q5VUR7 823 aa11.08□□□□□ -0.64
SMARCC2-209ENST00000550164 PHLDB2Q86SQ0 1253 aa11.08□□□□□ -0.64
SMARCC2-209ENST00000550164 GLYCTKQ8IVS8 523 aa11.08□□□□□ -0.64
SMARCC2-209ENST00000550164 PARP9Q8IXQ6 854 aa11.08□□□□□ -0.64
SMARCC2-209ENST00000550164 EDEM3Q9BZQ6 932 aa11.08□□□□□ -0.64
SMARCC2-209ENST00000550164 HAUS2Q9NVX0 235 aa11.08□□□□□ -0.64
SMARCC2-209ENST00000550164 ZSCAN5CA6NGD5 496 aaPredicted RBP11.08□□□□□ -0.64
SMARCC2-209ENST00000550164 ECM2O94769 699 aaPredicted RBP11.08□□□□□ -0.64
SMARCC2-209ENST00000550164 ECEL1O95672 775 aa11.08□□□□□ -0.64
SMARCC2-209ENST00000550164 DLATP10515 647 aaKnown RBP11.08□□□□□ -0.64
SMARCC2-209ENST00000550164 ATF7P17544 494 aaPredicted RBP11.08□□□□□ -0.64
SMARCC2-209ENST00000550164 SNAP25P60880 206 aa11.08□□□□□ -0.64
SMARCC2-209ENST00000550164 MYO1EQ12965 1108 aa11.08□□□□□ -0.64
SMARCC2-209ENST00000550164 LRRC14Q15048 493 aa11.08□□□□□ -0.64
SMARCC2-209ENST00000550164 DCUN1D2Q6PH85 259 aa11.08□□□□□ -0.64
SMARCC2-209ENST00000550164 PIGOQ8TEQ8 1089 aa11.08□□□□□ -0.64
SMARCC2-209ENST00000550164 CHMP6Q96FZ7 201 aa11.08□□□□□ -0.64
SMARCC2-209ENST00000550164 AMNQ9BXJ7 453 aa11.08□□□□□ -0.64
SMARCC2-209ENST00000550164 AZI2Q9H6S1 392 aa11.08□□□□□ -0.64
SMARCC2-209ENST00000550164 ARHGAP20Q9P2F6 1191 aa11.08□□□□□ -0.64
SMARCC2-209ENST00000550164 GGT7Q9UJ14 662 aa11.08□□□□□ -0.64
SMARCC2-209ENST00000550164 DNAJC12Q9UKB3 198 aa11.08□□□□□ -0.64
SMARCC2-209ENST00000550164 SIGLEC1Q9BZZ2 1709 aa11.08□□□□□ -0.64
SMARCC2-209ENST00000550164 PNMA6FA0A0J9YX94 578 aa11.07□□□□□ -0.64
SMARCC2-209ENST00000550164 NPHP3-ACAD11A0A0J9YXS1 232 aa11.07□□□□□ -0.64
SMARCC2-209ENST00000550164 ICA1Q05084 483 aa11.07□□□□□ -0.64
SMARCC2-209ENST00000550164 SEMA3FQ13275 785 aa11.07□□□□□ -0.64
SMARCC2-209ENST00000550164 MUM1Q2TAK8 710 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms