RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 PRMT6Q96LA8 375 aaPredicted RBP15.01□□□□□ -0.01
PRPF40B-209ENST00000548825 LRRC27Q9C0I9 530 aa15.01□□□□□ -0.01
PRPF40B-209ENST00000548825 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.01□□□□□ -0.01
PRPF40B-209ENST00000548825 RAB21Q9UL25 225 aa15.01□□□□□ -0.01
PRPF40B-209ENST00000548825 ATP8B1O43520 1251 aa15□□□□□ -0.01
PRPF40B-209ENST00000548825 TLR2O60603 784 aa15□□□□□ -0.01
PRPF40B-209ENST00000548825 COPB2P35606 906 aa15□□□□□ -0.01
PRPF40B-209ENST00000548825 GABPAQ06546 454 aa15□□□□□ -0.01
PRPF40B-209ENST00000548825 HAUS3Q68CZ6 603 aa15□□□□□ -0.01
PRPF40B-209ENST00000548825 CREG2Q8IUH2 290 aa15□□□□□ -0.01
PRPF40B-209ENST00000548825 BANK1Q8NDB2 785 aa15□□□□□ -0.01
PRPF40B-209ENST00000548825 TCEAL9Q9UHQ7 104 aa15□□□□□ -0.01
PRPF40B-209ENST00000548825 GAKO14976 1311 aa15□□□□□ -0.01
PRPF40B-209ENST00000548825 EML1O00423 815 aa15□□□□□ -0.01
PRPF40B-209ENST00000548825 CARSP49589 748 aaKnown RBP15□□□□□ -0.01
PRPF40B-209ENST00000548825 PTK2Q05397 1052 aa15□□□□□ -0.01
PRPF40B-209ENST00000548825 TUBB2AQ13885 445 aa15□□□□□ -0.01
PRPF40B-209ENST00000548825 PDIA5Q14554 519 aa15□□□□□ -0.01
PRPF40B-209ENST00000548825 PAPD7Q5XG87 772 aaKnown RBP15□□□□□ -0.01
PRPF40B-209ENST00000548825 TUBB2BQ9BVA1 445 aa15□□□□□ -0.01
PRPF40B-209ENST00000548825 GCNT4Q9P109 453 aa15□□□□□ -0.01
PRPF40B-209ENST00000548825 HPCAL4Q9UM19 191 aa15□□□□□ -0.01
PRPF40B-209ENST00000548825 RABGAP1Q9Y3P9 1069 aa15□□□□□ -0.01
PRPF40B-209ENST00000548825 A0A1B0GUL6 1792 aa15□□□□□ -0.01
PRPF40B-209ENST00000548825 BMP3P12645 472 aa15□□□□□ -0.01
PRPF40B-209ENST00000548825 DGKZQ13574 1117 aa15□□□□□ -0.01
PRPF40B-209ENST00000548825 LUC7LQ9NQ29 371 aaKnown RBP15□□□□□ -0.01
PRPF40B-209ENST00000548825 SYDE2Q5VT97 1194 aa14.99□□□□□ -0.01
PRPF40B-209ENST00000548825 UHMK1Q8TAS1 419 aaKnown RBP14.99□□□□□ -0.01
PRPF40B-209ENST00000548825 BAP1Q92560 729 aa14.99□□□□□ -0.01
PRPF40B-209ENST00000548825 DYDC2Q96IM9 177 aa14.99□□□□□ -0.01
PRPF40B-209ENST00000548825 CWC15Q9P013 229 aaKnown RBP14.99□□□□□ -0.01
PRPF40B-209ENST00000548825 SWAP70Q9UH65 585 aa14.99□□□□□ -0.01
PRPF40B-209ENST00000548825 PLCH1Q4KWH8 1693 aa14.99□□□□□ -0.01
PRPF40B-209ENST00000548825 TMEM150BA6NC51 233 aa14.99□□□□□ -0.01
PRPF40B-209ENST00000548825 POLD1P28340 1107 aa14.99□□□□□ -0.01
PRPF40B-209ENST00000548825 ACTN2P35609 894 aa14.99□□□□□ -0.01
PRPF40B-209ENST00000548825 ARSHQ5FYA8 562 aa14.99□□□□□ -0.01
PRPF40B-209ENST00000548825 LRCH2Q5VUJ6 765 aa14.99□□□□□ -0.01
PRPF40B-209ENST00000548825 CCNI2Q6ZMN8 369 aaPredicted RBP14.99□□□□□ -0.01
PRPF40B-209ENST00000548825 FAM76AQ8TAV0 307 aa14.99□□□□□ -0.01
PRPF40B-209ENST00000548825 DPH5Q9H2P9 285 aa14.99□□□□□ -0.01
PRPF40B-209ENST00000548825 GOPCQ9HD26 462 aa14.99□□□□□ -0.01
PRPF40B-209ENST00000548825 FAM198AQ9UFP1 575 aa14.99□□□□□ -0.01
PRPF40B-209ENST00000548825 PHLPP1O60346 1717 aa14.99□□□□□ -0.01
PRPF40B-209ENST00000548825 ROBO3Q96MS0 1386 aa14.99□□□□□ -0.01
PRPF40B-209ENST00000548825 A0A1W2PRG0 241 aa14.99□□□□□ -0.01
PRPF40B-209ENST00000548825 MEIS2O14770 477 aa14.99□□□□□ -0.01
PRPF40B-209ENST00000548825 AKAP3O75969 853 aa14.99□□□□□ -0.01
PRPF40B-209ENST00000548825 IBSPP21815 317 aaPredicted RBP14.99□□□□□ -0.01
PRPF40B-209ENST00000548825 CFAP221Q4G0U5 840 aa14.99□□□□□ -0.01
PRPF40B-209ENST00000548825 PHLDB2Q86SQ0 1253 aa14.99□□□□□ -0.01
PRPF40B-209ENST00000548825 TLR10Q9BXR5 811 aa14.99□□□□□ -0.01
PRPF40B-209ENST00000548825 TMOD2Q9NZR1 351 aa14.99□□□□□ -0.01
PRPF40B-209ENST00000548825 ESYT2A0FGR8 921 aa14.98□□□□□ -0.01
PRPF40B-209ENST00000548825 TISP43B9A030 160 aa14.98□□□□□ -0.01
PRPF40B-209ENST00000548825 H0YIN7 160 aa14.98□□□□□ -0.01
PRPF40B-209ENST00000548825 MSH4O15457 936 aa14.98□□□□□ -0.01
PRPF40B-209ENST00000548825 GAS7O60861 476 aa14.98□□□□□ -0.01
PRPF40B-209ENST00000548825 PPP1R2P41236 205 aa14.98□□□□□ -0.01
PRPF40B-209ENST00000548825 SH3BP5LQ7L8J4 393 aa14.98□□□□□ -0.01
PRPF40B-209ENST00000548825 DAAM2Q86T65 1068 aa14.98□□□□□ -0.01
PRPF40B-209ENST00000548825 CERS3Q8IU89 383 aa14.98□□□□□ -0.01
PRPF40B-209ENST00000548825 PROM2Q8N271 834 aa14.98□□□□□ -0.01
PRPF40B-209ENST00000548825 FAM71BQ8TC56 605 aa14.98□□□□□ -0.01
PRPF40B-209ENST00000548825 CRAMP1Q96RY5 1269 aa14.98□□□□□ -0.01
PRPF40B-209ENST00000548825 TRPC5Q9UL62 973 aaPredicted RBP14.98□□□□□ -0.01
PRPF40B-209ENST00000548825 CASZ1Q86V15 1759 aa14.98□□□□□ -0.01
PRPF40B-209ENST00000548825 BACH1O14867 736 aa14.98□□□□□ -0.01
PRPF40B-209ENST00000548825 HSF2BPO75031 334 aa14.98□□□□□ -0.01
PRPF40B-209ENST00000548825 GLI1P08151 1106 aa14.98□□□□□ -0.01
PRPF40B-209ENST00000548825 FAM153BP0C7A2 387 aa14.98□□□□□ -0.01
PRPF40B-209ENST00000548825 EPB41P11171 864 aaKnown RBP14.98□□□□□ -0.01
PRPF40B-209ENST00000548825 ALDH1B1P30837 517 aa14.98□□□□□ -0.01
PRPF40B-209ENST00000548825 FAM153CQ494X1 144 aa14.98□□□□□ -0.01
PRPF40B-209ENST00000548825 ODF2Q5BJF6 829 aa14.98□□□□□ -0.01
PRPF40B-209ENST00000548825 ZNF746Q6NUN9 644 aaPredicted RBP14.98□□□□□ -0.01
PRPF40B-209ENST00000548825 OR2W6PQ8NHA6 318 aa14.98□□□□□ -0.01
PRPF40B-209ENST00000548825 EXOC4Q96A65 974 aa14.98□□□□□ -0.01
PRPF40B-209ENST00000548825 DDX47Q9H0S4 455 aaKnown RBP14.98□□□□□ -0.01
PRPF40B-209ENST00000548825 FAM153AQ9UHL3 310 aa14.98□□□□□ -0.01
PRPF40B-209ENST00000548825 KDM3AQ9Y4C1 1321 aa14.98□□□□□ -0.01
PRPF40B-209ENST00000548825 SERPING1P05155 500 aa14.97□□□□□ -0.01
PRPF40B-209ENST00000548825 NPR1P16066 1061 aa14.97□□□□□ -0.01
PRPF40B-209ENST00000548825 CCT5P48643 541 aa14.97□□□□□ -0.01
PRPF40B-209ENST00000548825 RPS6KA1Q15418 735 aa14.97□□□□□ -0.01
PRPF40B-209ENST00000548825 ODR4Q5SWX8 454 aa14.97□□□□□ -0.01
PRPF40B-209ENST00000548825 KLHDC7AQ5VTJ3 777 aa14.97□□□□□ -0.01
PRPF40B-209ENST00000548825 PPP4R3AQ6IN85 833 aa14.97□□□□□ -0.01
PRPF40B-209ENST00000548825 FAM163AQ96GL9 167 aaPredicted RBP14.97□□□□□ -0.01
PRPF40B-209ENST00000548825 FAM84AQ96KN4 292 aa14.97□□□□□ -0.01
PRPF40B-209ENST00000548825 EIF2AK1Q9BQI3 630 aaKnown RBP14.97□□□□□ -0.01
PRPF40B-209ENST00000548825 NOL4O94818 638 aa14.97□□□□□ -0.01
PRPF40B-209ENST00000548825 NR3C1P04150 777 aa14.97□□□□□ -0.01
PRPF40B-209ENST00000548825 TCP1P17987 556 aaKnown RBP14.97□□□□□ -0.01
PRPF40B-209ENST00000548825 FECHP22830 423 aa14.97□□□□□ -0.01
PRPF40B-209ENST00000548825 IRX5P78411 483 aaPredicted RBP14.97□□□□□ -0.01
PRPF40B-209ENST00000548825 TMEM119Q4V9L6 283 aa14.97□□□□□ -0.01
PRPF40B-209ENST00000548825 ALKBH5Q6P6C2 394 aaKnown RBP14.97□□□□□ -0.01
PRPF40B-209ENST00000548825 GLYCTKQ8IVS8 523 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms