RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 RBM12Q9NTZ6 932 aaKnown RBP12.64□□□□□ -0.39
DDB1-224ENST00000545894 RNF14Q9UBS8 474 aa12.64□□□□□ -0.39
DDB1-224ENST00000545894 SALL4Q9UJQ4 1053 aa12.64□□□□□ -0.39
DDB1-224ENST00000545894 STX8Q9UNK0 236 aa12.64□□□□□ -0.39
DDB1-224ENST00000545894 DDTLA6NHG4 134 aaPredicted RBP12.64□□□□□ -0.39
DDB1-224ENST00000545894 GFPT1Q06210 699 aaPredicted RBP12.64□□□□□ -0.39
DDB1-224ENST00000545894 GRB10Q13322 594 aa12.64□□□□□ -0.39
DDB1-224ENST00000545894 KLHDC7AQ5VTJ3 777 aa12.64□□□□□ -0.39
DDB1-224ENST00000545894 MAP1SQ66K74 1059 aaPredicted RBP12.64□□□□□ -0.39
DDB1-224ENST00000545894 CACNA2D4Q7Z3S7 1137 aa12.64□□□□□ -0.39
DDB1-224ENST00000545894 IFT20Q8IY31 132 aa12.64□□□□□ -0.39
DDB1-224ENST00000545894 ANKRD13CQ8N6S4 541 aa12.64□□□□□ -0.39
DDB1-224ENST00000545894 TBCKQ8TEA7 893 aa12.64□□□□□ -0.39
DDB1-224ENST00000545894 ARL8AQ96BM9 186 aa12.64□□□□□ -0.39
DDB1-224ENST00000545894 MTMR8Q96EF0 704 aa12.64□□□□□ -0.39
DDB1-224ENST00000545894 BLOC1S4Q9NUP1 217 aa12.64□□□□□ -0.39
DDB1-224ENST00000545894 MYH1P12882 1939 aa12.64□□□□□ -0.39
DDB1-224ENST00000545894 ERLIN2O94905 339 aa12.63□□□□□ -0.39
DDB1-224ENST00000545894 HOXA7P31268 230 aaPredicted RBP12.63□□□□□ -0.39
DDB1-224ENST00000545894 SLC1A4P43007 532 aa12.63□□□□□ -0.39
DDB1-224ENST00000545894 TNNI2P48788 182 aa12.63□□□□□ -0.39
DDB1-224ENST00000545894 GTF2A1P52655 376 aaPredicted RBP12.63□□□□□ -0.39
DDB1-224ENST00000545894 APBA1Q02410 837 aa12.63□□□□□ -0.39
DDB1-224ENST00000545894 TNFAIP1Q13829 316 aa12.63□□□□□ -0.39
DDB1-224ENST00000545894 LRRC55Q6ZSA7 311 aa12.63□□□□□ -0.39
DDB1-224ENST00000545894 POTEDQ86YR6 584 aa12.63□□□□□ -0.39
DDB1-224ENST00000545894 TEPSINQ96N21 525 aa12.63□□□□□ -0.39
DDB1-224ENST00000545894 RBAK-RBAKDNI3L0D1 243 aa12.63□□□□□ -0.39
DDB1-224ENST00000545894 BUB1O43683 1085 aa12.63□□□□□ -0.39
DDB1-224ENST00000545894 CLSTN1O94985 981 aa12.63□□□□□ -0.39
DDB1-224ENST00000545894 TXKP42681 527 aa12.63□□□□□ -0.39
DDB1-224ENST00000545894 NAP1L1P55209 391 aaKnown RBP12.63□□□□□ -0.39
DDB1-224ENST00000545894 DYMQ7RTS9 669 aa12.63□□□□□ -0.39
DDB1-224ENST00000545894 GPIHBP1Q8IV16 184 aa12.63□□□□□ -0.39
DDB1-224ENST00000545894 SULF1Q8IWU6 871 aa12.63□□□□□ -0.39
DDB1-224ENST00000545894 LARP4BQ92615 738 aaKnown RBP12.63□□□□□ -0.39
DDB1-224ENST00000545894 CDK5RAP3Q96JB5 506 aa12.63□□□□□ -0.39
DDB1-224ENST00000545894 ZIM3Q96PE6 472 aa12.63□□□□□ -0.39
DDB1-224ENST00000545894 TSG101Q99816 390 aa12.63□□□□□ -0.39
DDB1-224ENST00000545894 GLIS2Q9BZE0 524 aaPredicted RBP12.63□□□□□ -0.39
DDB1-224ENST00000545894 CPVLQ9H3G5 476 aa12.63□□□□□ -0.39
DDB1-224ENST00000545894 GDF3Q9NR23 364 aa12.63□□□□□ -0.39
DDB1-224ENST00000545894 SLURP2P0DP57 97 aa12.62□□□□□ -0.39
DDB1-224ENST00000545894 PAK2Q13177 524 aa12.62□□□□□ -0.39
DDB1-224ENST00000545894 TDRD12Q587J7 1177 aaKnown RBP12.62□□□□□ -0.39
DDB1-224ENST00000545894 HGSNATQ68CP4 663 aa12.62□□□□□ -0.39
DDB1-224ENST00000545894 FOXR2Q6PJQ5 311 aa12.62□□□□□ -0.39
DDB1-224ENST00000545894 SLC44A5Q8NCS7 719 aa12.62□□□□□ -0.39
DDB1-224ENST00000545894 MS4A14Q96JA4 679 aa12.62□□□□□ -0.39
DDB1-224ENST00000545894 PNMA5Q96PV4 448 aa12.62□□□□□ -0.39
DDB1-224ENST00000545894 NUCKS1Q9H1E3 243 aaKnown RBP12.62□□□□□ -0.39
DDB1-224ENST00000545894 RABEP2Q9H5N1 569 aa12.62□□□□□ -0.39
DDB1-224ENST00000545894 RIC8AQ9NPQ8 531 aa12.62□□□□□ -0.39
DDB1-224ENST00000545894 SEC63Q9UGP8 760 aaKnown RBP12.62□□□□□ -0.39
DDB1-224ENST00000545894 GLI1P08151 1106 aa12.62□□□□□ -0.39
DDB1-224ENST00000545894 RASA1P20936 1047 aa12.62□□□□□ -0.39
DDB1-224ENST00000545894 LIG3P49916 1009 aa12.62□□□□□ -0.39
DDB1-224ENST00000545894 FXR2P51116 673 aaKnown RBP eCLIP12.62□□□□□ -0.393e-10■■■□□ 16.8
DDB1-224ENST00000545894 ATP2B2Q01814 1243 aa12.62□□□□□ -0.39
DDB1-224ENST00000545894 PSMD2Q13200 908 aa12.62□□□□□ -0.39
DDB1-224ENST00000545894 CALCRLQ16602 461 aa12.62□□□□□ -0.39
DDB1-224ENST00000545894 TMEM266Q2M3C6 531 aa12.62□□□□□ -0.39
DDB1-224ENST00000545894 SLC9C1Q4G0N8 1177 aa12.62□□□□□ -0.39
DDB1-224ENST00000545894 CFAP58Q5T655 872 aa12.62□□□□□ -0.39
DDB1-224ENST00000545894 NBPF12Q5TAG4 269 aaPredicted RBP12.62□□□□□ -0.39
DDB1-224ENST00000545894 TTC19Q6DKK2 380 aaPredicted RBP12.62□□□□□ -0.39
DDB1-224ENST00000545894 MMS22LQ6ZRQ5 1243 aa12.62□□□□□ -0.39
DDB1-224ENST00000545894 SUGP1Q8IWZ8 645 aaKnown RBP12.62□□□□□ -0.39
DDB1-224ENST00000545894 REXO1Q8N1G1 1221 aaKnown RBP12.62□□□□□ -0.39
DDB1-224ENST00000545894 MTMR9Q96QG7 549 aa12.62□□□□□ -0.39
DDB1-224ENST00000545894 TANGO6Q9C0B7 1094 aa12.62□□□□□ -0.39
DDB1-224ENST00000545894 LRRC27Q9C0I9 530 aa12.62□□□□□ -0.39
DDB1-224ENST00000545894 LUC7LQ9NQ29 371 aaKnown RBP12.62□□□□□ -0.39
DDB1-224ENST00000545894 ATRNL1Q5VV63 1379 aa12.61□□□□□ -0.39
DDB1-224ENST00000545894 CDK5RAP2Q96SN8 1893 aa12.61□□□□□ -0.39
DDB1-224ENST00000545894 SERPING1P05155 500 aa12.61□□□□□ -0.39
DDB1-224ENST00000545894 KCNMA1Q12791 1236 aa12.61□□□□□ -0.39
DDB1-224ENST00000545894 B4GALNT4Q76KP1 1039 aa12.61□□□□□ -0.39
DDB1-224ENST00000545894 IQCKQ8N0W5 287 aa12.61□□□□□ -0.39
DDB1-224ENST00000545894 RAD54LQ92698 747 aa12.61□□□□□ -0.39
DDB1-224ENST00000545894 SYN2Q92777 582 aaPredicted RBP12.61□□□□□ -0.39
DDB1-224ENST00000545894 CCDC43Q96MW1 224 aaKnown RBP12.61□□□□□ -0.39
DDB1-224ENST00000545894 DHX36Q9H2U1 1008 aaKnown RBP12.61□□□□□ -0.39
DDB1-224ENST00000545894 ZNF287Q9HBT7 754 aa12.61□□□□□ -0.39
DDB1-224ENST00000545894 CEP72Q9P209 647 aa12.61□□□□□ -0.39
DDB1-224ENST00000545894 BIN2Q9UBW5 565 aaPredicted RBP12.61□□□□□ -0.39
DDB1-224ENST00000545894 PPP2R3BQ9Y5P8 575 aa12.61□□□□□ -0.39
DDB1-224ENST00000545894 ESYT2A0FGR8 921 aa12.6□□□□□ -0.39
DDB1-224ENST00000545894 GRID2IPA4D2P6 1211 aa12.6□□□□□ -0.39
DDB1-224ENST00000545894 TRAF5O00463 557 aa12.6□□□□□ -0.39
DDB1-224ENST00000545894 HEXIM1O94992 359 aaKnown RBP12.6□□□□□ -0.39
DDB1-224ENST00000545894 SMARCA1P28370 1054 aa12.6□□□□□ -0.39
DDB1-224ENST00000545894 INPP5BP32019 993 aa12.6□□□□□ -0.39
DDB1-224ENST00000545894 CARSP49589 748 aaKnown RBP12.6□□□□□ -0.39
DDB1-224ENST00000545894 PDCLQ13371 301 aa12.6□□□□□ -0.39
DDB1-224ENST00000545894 SFMBT2Q5VUG0 894 aa12.6□□□□□ -0.39
DDB1-224ENST00000545894 CHADLQ6NUI6 762 aa12.6□□□□□ -0.39
DDB1-224ENST00000545894 MREGQ8N565 214 aa12.6□□□□□ -0.39
DDB1-224ENST00000545894 CSRNP1Q96S65 589 aa12.6□□□□□ -0.39
DDB1-224ENST00000545894 RAB34Q9BZG1 259 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms