RNA–Protein interactions for RNA: ENST00000545608.5

USP28-215, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 733 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-215ENST00000545608 LMCD1Q9NZU5 365 aa9.73□□□□□ -0.85
USP28-215ENST00000545608 COG5Q9UP83 839 aa9.73□□□□□ -0.85
USP28-215ENST00000545608 EMSYQ7Z589 1322 aa9.73□□□□□ -0.85
USP28-215ENST00000545608 PTPRSQ13332 1948 aa9.72□□□□□ -0.85
USP28-215ENST00000545608 EYSQ5T1H1 3165 aa9.72□□□□□ -0.85
USP28-215ENST00000545608 CHD9Q3L8U1 2897 aa9.72□□□□□ -0.85
USP28-215ENST00000545608 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.72□□□□□ -0.85
USP28-215ENST00000545608 GSTTP1A0A1W2PQM5 241 aa9.72□□□□□ -0.85
USP28-215ENST00000545608 AMHP03971 560 aa9.72□□□□□ -0.85
USP28-215ENST00000545608 CALM1P0DP23 149 aa9.72□□□□□ -0.85
USP28-215ENST00000545608 CALM2P0DP24 149 aa9.72□□□□□ -0.85
USP28-215ENST00000545608 CALM3P0DP25 149 aa9.72□□□□□ -0.85
USP28-215ENST00000545608 GNAT1P11488 350 aa9.72□□□□□ -0.85
USP28-215ENST00000545608 TCF7P36402 384 aaPredicted RBP9.72□□□□□ -0.85
USP28-215ENST00000545608 HTRA4P83105 476 aaPredicted RBP9.72□□□□□ -0.85
USP28-215ENST00000545608 ARHGAP4P98171 946 aa9.72□□□□□ -0.85
USP28-215ENST00000545608 FAM26DQ5JW98 314 aa9.72□□□□□ -0.85
USP28-215ENST00000545608 TMTC3Q6ZXV5 915 aa9.72□□□□□ -0.85
USP28-215ENST00000545608 FANCBQ8NB91 859 aa9.72□□□□□ -0.85
USP28-215ENST00000545608 LMBR1Q8WVP7 490 aa9.72□□□□□ -0.85
USP28-215ENST00000545608 SEPT8Q92599 483 aa9.72□□□□□ -0.85
USP28-215ENST00000545608 HLA-CQ95604 372 aa9.72□□□□□ -0.85
USP28-215ENST00000545608 GPRASP2Q96D09 838 aa9.72□□□□□ -0.85
USP28-215ENST00000545608 C17orf80Q9BSJ5 609 aa9.72□□□□□ -0.85
USP28-215ENST00000545608 ZMYND15Q9H091 742 aa9.72□□□□□ -0.85
USP28-215ENST00000545608 ANO2Q9NQ90 1003 aa9.72□□□□□ -0.85
USP28-215ENST00000545608 PKD2L1Q9P0L9 805 aa9.72□□□□□ -0.85
USP28-215ENST00000545608 ZNF215Q9UL58 517 aaPredicted RBP9.72□□□□□ -0.85
USP28-215ENST00000545608 PCDHA6Q9UN73 950 aa9.72□□□□□ -0.85
USP28-215ENST00000545608 INSL6Q9Y581 213 aa9.72□□□□□ -0.85
USP28-215ENST00000545608 PCDHA8Q9Y5H6 950 aa9.72□□□□□ -0.85
USP28-215ENST00000545608 UBIAD1Q9Y5Z9 338 aa9.72□□□□□ -0.85
USP28-215ENST00000545608 SLC12A7Q9Y666 1083 aa9.72□□□□□ -0.85
USP28-215ENST00000545608 PRUNE2Q8WUY3 3088 aa9.71□□□□□ -0.85
USP28-215ENST00000545608 VCANP13611 3396 aa9.71□□□□□ -0.85
USP28-215ENST00000545608 CAND2O75155 1236 aa9.71□□□□□ -0.86
USP28-215ENST00000545608 UPP2O95045 317 aa9.71□□□□□ -0.86
USP28-215ENST00000545608 CHRNA1P02708 482 aa9.71□□□□□ -0.86
USP28-215ENST00000545608 RUFY4Q6ZNE9 571 aa9.71□□□□□ -0.86
USP28-215ENST00000545608 SGMS1Q86VZ5 419 aa9.71□□□□□ -0.86
USP28-215ENST00000545608 MICU3Q86XE3 530 aa9.71□□□□□ -0.86
USP28-215ENST00000545608 GIMAP8Q8ND71 665 aaPredicted RBP9.71□□□□□ -0.86
USP28-215ENST00000545608 SP7Q8TDD2 431 aaPredicted RBP9.71□□□□□ -0.86
USP28-215ENST00000545608 SEPT1Q8WYJ6 367 aa9.71□□□□□ -0.86
USP28-215ENST00000545608 TOP1MTQ969P6 601 aa9.71□□□□□ -0.86
USP28-215ENST00000545608 TCEANC2Q96MN5 208 aa9.71□□□□□ -0.86
USP28-215ENST00000545608 JADE2Q9NQC1 790 aa9.71□□□□□ -0.86
USP28-215ENST00000545608 PCDHGA4Q9Y5G9 962 aa9.71□□□□□ -0.86
USP28-215ENST00000545608 NRCAMQ92823 1304 aa9.71□□□□□ -0.86
USP28-215ENST00000545608 SPDYE3A6NKU9 549 aa9.7□□□□□ -0.86
USP28-215ENST00000545608 COL9A1P20849 921 aa9.7□□□□□ -0.86
USP28-215ENST00000545608 MARK3P27448 753 aa9.7□□□□□ -0.86
USP28-215ENST00000545608 CLCN1P35523 988 aa9.7□□□□□ -0.86
USP28-215ENST00000545608 EXOSC10Q01780 885 aaKnown RBP9.7□□□□□ -0.86
USP28-215ENST00000545608 MGAT3Q09327 533 aa9.7□□□□□ -0.86
USP28-215ENST00000545608 PPFIA1Q13136 1202 aa9.7□□□□□ -0.86
USP28-215ENST00000545608 MTMR1Q13613 665 aa9.7□□□□□ -0.86
USP28-215ENST00000545608 MARCH8Q5T0T0 291 aa9.7□□□□□ -0.86
USP28-215ENST00000545608 WWC2Q6AWC2 1192 aa9.7□□□□□ -0.86
USP28-215ENST00000545608 HEATR3Q7Z4Q2 680 aa9.7□□□□□ -0.86
USP28-215ENST00000545608 RPAINQ86UA6 219 aa9.7□□□□□ -0.86
USP28-215ENST00000545608 CYP2W1Q8TAV3 490 aa9.7□□□□□ -0.86
USP28-215ENST00000545608 CDHR1Q96JP9 859 aa9.7□□□□□ -0.86
USP28-215ENST00000545608 PGBD1Q96JS3 809 aa9.7□□□□□ -0.86
USP28-215ENST00000545608 NEK1Q96PY6 1258 aa9.7□□□□□ -0.86
USP28-215ENST00000545608 PCYT2Q99447 389 aa9.7□□□□□ -0.86
USP28-215ENST00000545608 EHMT1Q9H9B1 1298 aa9.7□□□□□ -0.86
USP28-215ENST00000545608 CDHR5Q9HBB8 845 aa9.7□□□□□ -0.86
USP28-215ENST00000545608 NPDC1Q9NQX5 325 aaPredicted RBP9.7□□□□□ -0.86
USP28-215ENST00000545608 RAPGEFL1Q9UHV5 662 aa9.7□□□□□ -0.86
USP28-215ENST00000545608 BRPF3Q9ULD4 1205 aa9.7□□□□□ -0.86
USP28-215ENST00000545608 PCDHGA10Q9Y5H3 936 aa9.7□□□□□ -0.86
USP28-215ENST00000545608 SPTBN5Q9NRC6 3674 aaKnown RBP9.7□□□□□ -0.86
USP28-215ENST00000545608 TCF20Q9UGU0 1960 aaKnown RBP9.7□□□□□ -0.86
USP28-215ENST00000545608 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.69□□□□□ -0.86
USP28-215ENST00000545608 MAFGO15525 162 aa9.69□□□□□ -0.86
USP28-215ENST00000545608 GHRP10912 638 aa9.69□□□□□ -0.86
USP28-215ENST00000545608 FUT2Q10981 343 aa9.69□□□□□ -0.86
USP28-215ENST00000545608 GRIK4Q16099 956 aa9.69□□□□□ -0.86
USP28-215ENST00000545608 ADCK5Q3MIX3 580 aa9.69□□□□□ -0.86
USP28-215ENST00000545608 EPC2Q52LR7 807 aa9.69□□□□□ -0.86
USP28-215ENST00000545608 BMP2KLQ5H9B9 411 aa9.69□□□□□ -0.86
USP28-215ENST00000545608 TAF2Q6P1X5 1199 aa9.69□□□□□ -0.86
USP28-215ENST00000545608 APOA5Q6Q788 366 aa9.69□□□□□ -0.86
USP28-215ENST00000545608 SYNE3Q6ZMZ3 975 aa9.69□□□□□ -0.86
USP28-215ENST00000545608 DNAJB3Q8WWF6 145 aa9.69□□□□□ -0.86
USP28-215ENST00000545608 CNTNAP5Q8WYK1 1306 aa9.69□□□□□ -0.86
USP28-215ENST00000545608 APBB2Q92870 758 aa9.69□□□□□ -0.86
USP28-215ENST00000545608 GLG1Q92896 1179 aa9.69□□□□□ -0.86
USP28-215ENST00000545608 ZBTB10Q96DT7 871 aa9.69□□□□□ -0.86
USP28-215ENST00000545608 YME1L1Q96TA2 773 aa9.69□□□□□ -0.86
USP28-215ENST00000545608 MXRA8Q9BRK3 442 aa9.69□□□□□ -0.86
USP28-215ENST00000545608 IFIH1Q9BYX4 1025 aaKnown RBP9.69□□□□□ -0.86
USP28-215ENST00000545608 SMARCAD1Q9H4L7 1026 aa9.69□□□□□ -0.86
USP28-215ENST00000545608 FAM217BQ9NTX9 383 aaPredicted RBP9.69□□□□□ -0.86
USP28-215ENST00000545608 ERAP1Q9NZ08 941 aa9.69□□□□□ -0.86
USP28-215ENST00000545608 V9GY48 417 aaPredicted RBP9.69□□□□□ -0.86
USP28-215ENST00000545608 NCOR1O75376 2440 aa9.68□□□□□ -0.86
USP28-215ENST00000545608 CHD7Q9P2D1 2997 aa9.68□□□□□ -0.86
USP28-215ENST00000545608 MBLAC1A4D2B0 266 aaPredicted RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms