RNA–Protein interactions for RNA: ENST00000539168.1

CDH5-202, Transcript of cadherin 5, humanhuman

TSL 2 BASIC

Gene CDH5, Length 1,672 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-202ENST00000539168 NAP1L5Q96NT1 182 aaPredicted RBP22.56■■□□□ 1.2
CDH5-202ENST00000539168 RBPJLQ9UBG7 517 aa22.56■■□□□ 1.2
CDH5-202ENST00000539168 SEL1LQ9UBV2 794 aa22.56■■□□□ 1.2
CDH5-202ENST00000539168 ODF2LQ9ULJ1 636 aa22.56■■□□□ 1.2
CDH5-202ENST00000539168 SPATA31C2B4DYI2 1134 aa22.55■■□□□ 1.2
CDH5-202ENST00000539168 CELF2O95319 508 aaKnown RBP22.55■■□□□ 1.2
CDH5-202ENST00000539168 ERCC3P19447 782 aa22.55■■□□□ 1.2
CDH5-202ENST00000539168 ALDH5A1P51649 535 aaPredicted RBP22.55■■□□□ 1.2
CDH5-202ENST00000539168 ANKRD23Q86SG2 305 aa22.55■■□□□ 1.2
CDH5-202ENST00000539168 C4orf19Q8IY42 314 aa22.55■■□□□ 1.2
CDH5-202ENST00000539168 PURBQ96QR8 312 aaKnown RBP22.55■■□□□ 1.2
CDH5-202ENST00000539168 PKD2L1Q9P0L9 805 aa22.55■■□□□ 1.2
CDH5-202ENST00000539168 ZNF500O60304 480 aaPredicted RBP22.55■■□□□ 1.2
CDH5-202ENST00000539168 GCLCP48506 637 aaPredicted RBP22.55■■□□□ 1.2
CDH5-202ENST00000539168 PSMC5P62195 406 aa22.55■■□□□ 1.2
CDH5-202ENST00000539168 KCTD2Q14681 263 aa22.55■■□□□ 1.2
CDH5-202ENST00000539168 FAM133AQ8N9E0 248 aa22.55■■□□□ 1.2
CDH5-202ENST00000539168 REEP2Q9BRK0 252 aa22.55■■□□□ 1.2
CDH5-202ENST00000539168 TIPINQ9BVW5 301 aa22.55■■□□□ 1.2
CDH5-202ENST00000539168 SRRTQ9BXP5 876 aaKnown RBP22.55■■□□□ 1.2
CDH5-202ENST00000539168 NRBP1Q9UHY1 535 aa22.55■■□□□ 1.2
CDH5-202ENST00000539168 ARHGEF35A5YM69 484 aa22.54■■□□□ 1.2
CDH5-202ENST00000539168 KCNA2P16389 499 aa22.54■■□□□ 1.2
CDH5-202ENST00000539168 EDNRBP24530 442 aa22.54■■□□□ 1.2
CDH5-202ENST00000539168 CCDC144BQ3MJ40 725 aa22.54■■□□□ 1.2
CDH5-202ENST00000539168 HSP90AA4PQ58FG1 418 aa22.54■■□□□ 1.2
CDH5-202ENST00000539168 SPECC1LQ69YQ0 1117 aa22.54■■□□□ 1.2
CDH5-202ENST00000539168 ANKRD40Q6AI12 368 aa22.54■■□□□ 1.2
CDH5-202ENST00000539168 PPP4R3CPQ6ZMV5 832 aa22.54■■□□□ 1.2
CDH5-202ENST00000539168 C1orf186Q6ZWK4 172 aa22.54■■□□□ 1.2
CDH5-202ENST00000539168 APTXQ7Z2E3 356 aaKnown RBP22.54■■□□□ 1.2
CDH5-202ENST00000539168 LRRC8AQ8IWT6 810 aa22.54■■□□□ 1.2
CDH5-202ENST00000539168 PIGOQ8TEQ8 1089 aa22.54■■□□□ 1.2
CDH5-202ENST00000539168 OLFML3Q9NRN5 406 aa22.54■■□□□ 1.2
CDH5-202ENST00000539168 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.54■■□□□ 1.2
CDH5-202ENST00000539168 PCDHA2Q9Y5H9 948 aa22.54■■□□□ 1.2
CDH5-202ENST00000539168 PCDHA10Q9Y5I2 948 aa22.54■■□□□ 1.2
CDH5-202ENST00000539168 CCL15-CCL14A0A0B4J2E2 113 aa22.53■■□□□ 1.2
CDH5-202ENST00000539168 TRIM49BA6NDI0 452 aa22.53■■□□□ 1.2
CDH5-202ENST00000539168 ATP9AO75110 1047 aa22.53■■□□□ 1.2
CDH5-202ENST00000539168 GUCY2CP25092 1073 aa22.53■■□□□ 1.2
CDH5-202ENST00000539168 ERVK-9P63128 1117 aa22.53■■□□□ 1.2
CDH5-202ENST00000539168 ERVK-24P63145 666 aa22.53■■□□□ 1.2
CDH5-202ENST00000539168 KRT31Q15323 416 aa22.53■■□□□ 1.2
CDH5-202ENST00000539168 CCL15Q16663 113 aa22.53■■□□□ 1.2
CDH5-202ENST00000539168 BANK1Q8NDB2 785 aa22.53■■□□□ 1.2
CDH5-202ENST00000539168 MS4A4AQ96JQ5 239 aa22.53■■□□□ 1.2
CDH5-202ENST00000539168 DUSP9Q99956 384 aaKnown RBP22.53■■□□□ 1.2
CDH5-202ENST00000539168 RTN4Q9NQC3 1192 aaKnown RBP22.53■■□□□ 1.2
CDH5-202ENST00000539168 ANKEF1Q9NU02 776 aa22.53■■□□□ 1.2
CDH5-202ENST00000539168 FAM13AO94988 1023 aa22.52■■□□□ 1.2
CDH5-202ENST00000539168 SFPQP23246 707 aaKnown RBP eCLIP22.52■■□□□ 1.2
CDH5-202ENST00000539168 COPB1P53618 953 aaKnown RBP22.52■■□□□ 1.2
CDH5-202ENST00000539168 PMS1P54277 932 aaKnown RBP22.52■■□□□ 1.2
CDH5-202ENST00000539168 STXBP4Q6ZWJ1 553 aa22.52■■□□□ 1.2
CDH5-202ENST00000539168 SMCR8Q8TEV9 937 aaPredicted RBP22.52■■□□□ 1.2
CDH5-202ENST00000539168 ATP6V0A1Q93050 837 aa22.52■■□□□ 1.2
CDH5-202ENST00000539168 MMP19Q99542 508 aa22.52■■□□□ 1.2
CDH5-202ENST00000539168 SEMA6BQ9H3T3 888 aa22.52■■□□□ 1.2
CDH5-202ENST00000539168 ZHX3Q9H4I2 956 aa22.52■■□□□ 1.2
CDH5-202ENST00000539168 JPH1Q9HDC5 661 aaPredicted RBP22.52■■□□□ 1.2
CDH5-202ENST00000539168 N4BP3O15049 544 aa22.52■■□□□ 1.2
CDH5-202ENST00000539168 PSAPP07602 524 aa22.52■■□□□ 1.2
CDH5-202ENST00000539168 LCTP09848 1927 aa22.52■■□□□ 1.2
CDH5-202ENST00000539168 TGFB3P10600 412 aa22.52■■□□□ 1.2
CDH5-202ENST00000539168 SPRYD7Q5W111 196 aa22.52■■□□□ 1.2
CDH5-202ENST00000539168 KCNV1Q6PIU1 500 aa22.52■■□□□ 1.2
CDH5-202ENST00000539168 GPRC5AQ8NFJ5 357 aa22.52■■□□□ 1.2
CDH5-202ENST00000539168 HPS3Q969F9 1004 aa22.52■■□□□ 1.2
CDH5-202ENST00000539168 CCDC43Q96MW1 224 aaKnown RBP22.52■■□□□ 1.2
CDH5-202ENST00000539168 RUSC1Q9BVN2 902 aa22.52■■□□□ 1.2
CDH5-202ENST00000539168 TXNRD2Q9NNW7 524 aa22.52■■□□□ 1.2
CDH5-202ENST00000539168 SLC9A2Q9UBY0 812 aa22.52■■□□□ 1.2
CDH5-202ENST00000539168 ITIH6Q6UXX5 1313 aa22.51■■□□□ 1.19
CDH5-202ENST00000539168 NPHP3-ACAD11A0A0J9YXS1 232 aa22.51■■□□□ 1.19
CDH5-202ENST00000539168 PDHXO00330 501 aa22.51■■□□□ 1.19
CDH5-202ENST00000539168 RGS20O76081 388 aa22.51■■□□□ 1.19
CDH5-202ENST00000539168 CLCN1P35523 988 aa22.51■■□□□ 1.19
CDH5-202ENST00000539168 CNTN2Q02246 1040 aa22.51■■□□□ 1.19
CDH5-202ENST00000539168 CHADLQ6NUI6 762 aa22.51■■□□□ 1.19
CDH5-202ENST00000539168 CCDC112Q8NEF3 446 aa22.51■■□□□ 1.19
CDH5-202ENST00000539168 ZNF830Q96NB3 372 aaPredicted RBP22.51■■□□□ 1.19
CDH5-202ENST00000539168 KCNF1Q9H3M0 494 aa22.51■■□□□ 1.19
CDH5-202ENST00000539168 PARVGQ9HBI0 331 aa22.51■■□□□ 1.19
CDH5-202ENST00000539168 INTS13Q9NVM9 706 aa22.51■■□□□ 1.19
CDH5-202ENST00000539168 UBE4BO95155 1302 aa22.5■■□□□ 1.19
CDH5-202ENST00000539168 GNA14O95837 355 aa22.5■■□□□ 1.19
CDH5-202ENST00000539168 ZNF131P52739 623 aa22.5■■□□□ 1.19
CDH5-202ENST00000539168 FKBP3Q00688 224 aaKnown RBP22.5■■□□□ 1.19
CDH5-202ENST00000539168 BMT2Q1RMZ1 405 aa22.5■■□□□ 1.19
CDH5-202ENST00000539168 OTUD6AQ7L8S5 288 aa22.5■■□□□ 1.19
CDH5-202ENST00000539168 CACTINQ8WUQ7 758 aaKnown RBP22.5■■□□□ 1.19
CDH5-202ENST00000539168 CEP63Q96MT8 703 aa22.5■■□□□ 1.19
CDH5-202ENST00000539168 EIF3DO15371 548 aaKnown RBP eCLIP22.49■■□□□ 1.19
CDH5-202ENST00000539168 CCNE2O96020 404 aa22.49■■□□□ 1.19
CDH5-202ENST00000539168 RAD51AP2Q09MP3 1159 aa22.49■■□□□ 1.19
CDH5-202ENST00000539168 EDRF1Q3B7T1 1238 aa22.49■■□□□ 1.19
CDH5-202ENST00000539168 MIS18BP1Q6P0N0 1132 aa22.49■■□□□ 1.19
CDH5-202ENST00000539168 SFR1Q86XK3 245 aa22.49■■□□□ 1.19
CDH5-202ENST00000539168 IRF2BP1Q8IU81 584 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms