RNA–Protein interactions for RNA: ENST00000535348.5

AP3B2-202, Transcript of adaptor related protein complex 3 subunit beta 2, humanhuman

TSL 1 (best) BASIC

Gene AP3B2, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B2-202ENST00000535348 FAM228BP0C875 321 aa12.9□□□□□ -0.34
AP3B2-202ENST00000535348 IBSPP21815 317 aaPredicted RBP12.9□□□□□ -0.34
AP3B2-202ENST00000535348 ITGB3BPQ13352 177 aaPredicted RBP12.9□□□□□ -0.34
AP3B2-202ENST00000535348 COBLL1Q53SF7 1204 aa12.9□□□□□ -0.34
AP3B2-202ENST00000535348 C12orf60Q5U649 245 aa12.9□□□□□ -0.34
AP3B2-202ENST00000535348 C15orf52Q6ZUT6 534 aaKnown RBP12.9□□□□□ -0.34
AP3B2-202ENST00000535348 DDX42Q86XP3 938 aaKnown RBP eCLIP12.9□□□□□ -0.34
AP3B2-202ENST00000535348 CD302Q8IX05 232 aa12.9□□□□□ -0.34
AP3B2-202ENST00000535348 TAF4BQ92750 862 aa12.9□□□□□ -0.34
AP3B2-202ENST00000535348 DDX12PQ92771 950 aa12.9□□□□□ -0.34
AP3B2-202ENST00000535348 PNMA5Q96PV4 448 aa12.9□□□□□ -0.34
AP3B2-202ENST00000535348 PVALEFA0A1B0GWK0 134 aa12.9□□□□□ -0.34
AP3B2-202ENST00000535348 PALM3A6NDB9 673 aaPredicted RBP12.9□□□□□ -0.34
AP3B2-202ENST00000535348 GNA11P29992 359 aa12.9□□□□□ -0.34
AP3B2-202ENST00000535348 TNNC1P63316 161 aa12.9□□□□□ -0.34
AP3B2-202ENST00000535348 CALCRLQ16602 461 aa12.9□□□□□ -0.34
AP3B2-202ENST00000535348 ODF2Q5BJF6 829 aa12.9□□□□□ -0.34
AP3B2-202ENST00000535348 MEI1Q5TIA1 1274 aa12.9□□□□□ -0.34
AP3B2-202ENST00000535348 SLC30A10Q6XR72 485 aa12.9□□□□□ -0.34
AP3B2-202ENST00000535348 MREGQ8N565 214 aa12.9□□□□□ -0.34
AP3B2-202ENST00000535348 NUDT12Q9BQG2 462 aa12.9□□□□□ -0.34
AP3B2-202ENST00000535348 GOLPH3Q9H4A6 298 aa12.9□□□□□ -0.34
AP3B2-202ENST00000535348 DBNDD1Q9H9R9 158 aa12.9□□□□□ -0.34
AP3B2-202ENST00000535348 CEP72Q9P209 647 aa12.9□□□□□ -0.34
AP3B2-202ENST00000535348 ATXN2Q99700 1313 aaKnown RBP12.89□□□□□ -0.35
AP3B2-202ENST00000535348 NOL4O94818 638 aa12.89□□□□□ -0.35
AP3B2-202ENST00000535348 FAM107AO95990 144 aa12.89□□□□□ -0.35
AP3B2-202ENST00000535348 CACNB1Q02641 598 aaPredicted RBP12.89□□□□□ -0.35
AP3B2-202ENST00000535348 FAM133AQ8N9E0 248 aa12.89□□□□□ -0.35
AP3B2-202ENST00000535348 INPP4AQ96PE3 977 aaPredicted RBP12.89□□□□□ -0.35
AP3B2-202ENST00000535348 GRID2IPA4D2P6 1211 aa12.89□□□□□ -0.35
AP3B2-202ENST00000535348 GCOM1H8Y6P7 765 aaPredicted RBP12.89□□□□□ -0.35
AP3B2-202ENST00000535348 MYZAPP0CAP1 466 aa12.89□□□□□ -0.35
AP3B2-202ENST00000535348 GSCP56915 257 aaPredicted RBP12.89□□□□□ -0.35
AP3B2-202ENST00000535348 KLHL30Q0D2K2 578 aa12.89□□□□□ -0.35
AP3B2-202ENST00000535348 DNAAF5Q86Y56 855 aa12.89□□□□□ -0.35
AP3B2-202ENST00000535348 USP38Q8NB14 1042 aa12.89□□□□□ -0.35
AP3B2-202ENST00000535348 SNX29Q8TEQ0 813 aa12.89□□□□□ -0.35
AP3B2-202ENST00000535348 CNKSR1Q969H4 720 aa12.89□□□□□ -0.35
AP3B2-202ENST00000535348 TAF1DQ9H5J8 278 aaPredicted RBP12.89□□□□□ -0.35
AP3B2-202ENST00000535348 CXorf56Q9H5V9 222 aa12.89□□□□□ -0.35
AP3B2-202ENST00000535348 COL4A3BPQ9Y5P4 624 aa12.89□□□□□ -0.35
AP3B2-202ENST00000535348 RBAK-RBAKDNI3L0D1 243 aa12.89□□□□□ -0.35
AP3B2-202ENST00000535348 BACH1O14867 736 aa12.89□□□□□ -0.35
AP3B2-202ENST00000535348 HSD17B3P37058 310 aa12.89□□□□□ -0.35
AP3B2-202ENST00000535348 ERVK-9P63128 1117 aa12.89□□□□□ -0.35
AP3B2-202ENST00000535348 SLC18A3Q16572 532 aa12.89□□□□□ -0.35
AP3B2-202ENST00000535348 DPP8Q6V1X1 898 aaPredicted RBP12.89□□□□□ -0.35
AP3B2-202ENST00000535348 KCNK18Q7Z418 384 aa12.89□□□□□ -0.35
AP3B2-202ENST00000535348 ZNF804AQ7Z570 1209 aa12.89□□□□□ -0.35
AP3B2-202ENST00000535348 NELFCDQ8IXH7 590 aa12.89□□□□□ -0.35
AP3B2-202ENST00000535348 MYOCDQ8IZQ8 938 aa12.89□□□□□ -0.35
AP3B2-202ENST00000535348 AP1M1Q9BXS5 423 aa12.89□□□□□ -0.35
AP3B2-202ENST00000535348 EDEM3Q9BZQ6 932 aa12.89□□□□□ -0.35
AP3B2-202ENST00000535348 TMX4Q9H1E5 349 aaPredicted RBP12.89□□□□□ -0.35
AP3B2-202ENST00000535348 TMBIM4Q9HC24 238 aa12.89□□□□□ -0.35
AP3B2-202ENST00000535348 SEC63Q9UGP8 760 aaKnown RBP12.89□□□□□ -0.35
AP3B2-202ENST00000535348 ABCB11O95342 1321 aa12.88□□□□□ -0.35
AP3B2-202ENST00000535348 CEP104O60308 925 aa12.88□□□□□ -0.35
AP3B2-202ENST00000535348 TMOD1P28289 359 aa12.88□□□□□ -0.35
AP3B2-202ENST00000535348 CTNNA1P35221 906 aaKnown RBP12.88□□□□□ -0.35
AP3B2-202ENST00000535348 RDXP35241 583 aaKnown RBP12.88□□□□□ -0.35
AP3B2-202ENST00000535348 FKBP3Q00688 224 aaKnown RBP12.88□□□□□ -0.35
AP3B2-202ENST00000535348 ACTN3Q08043 901 aaPredicted RBP12.88□□□□□ -0.35
AP3B2-202ENST00000535348 RPS6KA1Q15418 735 aa12.88□□□□□ -0.35
AP3B2-202ENST00000535348 YTHDF3Q7Z739 585 aaKnown RBP12.88□□□□□ -0.35
AP3B2-202ENST00000535348 CCDC13Q8IYE1 715 aa12.88□□□□□ -0.35
AP3B2-202ENST00000535348 ANKS1AQ92625 1134 aa12.88□□□□□ -0.35
AP3B2-202ENST00000535348 CYFIP2Q96F07 1278 aa12.88□□□□□ -0.35
AP3B2-202ENST00000535348 PIGSQ96S52 555 aa12.88□□□□□ -0.35
AP3B2-202ENST00000535348 STK17AQ9UEE5 414 aa12.88□□□□□ -0.35
AP3B2-202ENST00000535348 HSPA9P38646 679 aaKnown RBP12.88□□□□□ -0.35
AP3B2-202ENST00000535348 UBE2SQ16763 222 aa12.88□□□□□ -0.35
AP3B2-202ENST00000535348 TMEM266Q2M3C6 531 aa12.88□□□□□ -0.35
AP3B2-202ENST00000535348 CCDC121Q6ZUS5 278 aa12.88□□□□□ -0.35
AP3B2-202ENST00000535348 KIAA0825Q8IV33 1275 aa12.88□□□□□ -0.35
AP3B2-202ENST00000535348 REXO1Q8N1G1 1221 aaKnown RBP12.88□□□□□ -0.35
AP3B2-202ENST00000535348 RAD54LQ92698 747 aa12.88□□□□□ -0.35
AP3B2-202ENST00000535348 CEP95Q96GE4 821 aa12.88□□□□□ -0.35
AP3B2-202ENST00000535348 CCDC114Q96M63 670 aa12.88□□□□□ -0.35
AP3B2-202ENST00000535348 EYA3Q99504 573 aa12.88□□□□□ -0.35
AP3B2-202ENST00000535348 VCPKMTQ9H867 229 aa12.88□□□□□ -0.35
AP3B2-202ENST00000535348 KLC4Q9NSK0 619 aa12.88□□□□□ -0.35
AP3B2-202ENST00000535348 KIF13BQ9NQT8 1826 aa12.88□□□□□ -0.35
AP3B2-202ENST00000535348 USP17L5A8MUK1 530 aa12.87□□□□□ -0.35
AP3B2-202ENST00000535348 SLC37A4O43826 429 aa12.87□□□□□ -0.35
AP3B2-202ENST00000535348 TDP2O95551 362 aa12.87□□□□□ -0.35
AP3B2-202ENST00000535348 KCNA3P22001 575 aa12.87□□□□□ -0.35
AP3B2-202ENST00000535348 POLD1P28340 1107 aa12.87□□□□□ -0.35
AP3B2-202ENST00000535348 EMC10Q5UCC4 262 aa12.87□□□□□ -0.35
AP3B2-202ENST00000535348 KRT79Q5XKE5 535 aa12.87□□□□□ -0.35
AP3B2-202ENST00000535348 ARFGAP2Q8N6H7 521 aa12.87□□□□□ -0.35
AP3B2-202ENST00000535348 UBLCP1Q8WVY7 318 aaPredicted RBP12.87□□□□□ -0.35
AP3B2-202ENST00000535348 NUCKS1Q9H1E3 243 aaKnown RBP12.87□□□□□ -0.35
AP3B2-202ENST00000535348 CD209Q9NNX6 404 aa12.87□□□□□ -0.35
AP3B2-202ENST00000535348 RIC8AQ9NPQ8 531 aa12.87□□□□□ -0.35
AP3B2-202ENST00000535348 PCDHGC5Q9Y5F6 944 aa12.87□□□□□ -0.35
AP3B2-202ENST00000535348 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.87□□□□□ -0.35
AP3B2-202ENST00000535348 CEP350Q5VT06 3117 aa12.87□□□□□ -0.35
AP3B2-202ENST00000535348 GOLGA6L7A0A1B0GV03 622 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms