RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 SLC35F6Q8N357 371 aa12.73□□□□□ -0.37
USP35-207ENST00000530546 PUF60Q9UHX1 559 aaKnown RBP12.73□□□□□ -0.37
USP35-207ENST00000530546 ATXN2Q99700 1313 aaKnown RBP12.73□□□□□ -0.37
USP35-207ENST00000530546 PHACTR2O75167 634 aa12.73□□□□□ -0.37
USP35-207ENST00000530546 MCM3P25205 808 aa12.73□□□□□ -0.37
USP35-207ENST00000530546 PSMD2Q13200 908 aa12.73□□□□□ -0.37
USP35-207ENST00000530546 KIF4BQ2VIQ3 1234 aa12.73□□□□□ -0.37
USP35-207ENST00000530546 COBLL1Q53SF7 1204 aa12.73□□□□□ -0.37
USP35-207ENST00000530546 HYIQ5T013 277 aa12.73□□□□□ -0.37
USP35-207ENST00000530546 WDR59Q6PJI9 974 aa12.73□□□□□ -0.37
USP35-207ENST00000530546 CCDC155Q8N6L0 562 aa12.73□□□□□ -0.37
USP35-207ENST00000530546 ERMNQ8TAM6 284 aa12.73□□□□□ -0.37
USP35-207ENST00000530546 NDST4Q9H3R1 872 aa12.73□□□□□ -0.37
USP35-207ENST00000530546 SUGCTQ9HAC7 445 aa12.73□□□□□ -0.37
USP35-207ENST00000530546 ZNHIT6Q9NWK9 470 aaKnown RBP12.73□□□□□ -0.37
USP35-207ENST00000530546 RGL1Q9NZL6 768 aa12.73□□□□□ -0.37
USP35-207ENST00000530546 GUCA1BQ9UMX6 200 aa12.73□□□□□ -0.37
USP35-207ENST00000530546 WNT10BO00744 389 aa12.72□□□□□ -0.37
USP35-207ENST00000530546 EHHADHQ08426 723 aa12.72□□□□□ -0.37
USP35-207ENST00000530546 SPIRE1Q08AE8 756 aa12.72□□□□□ -0.37
USP35-207ENST00000530546 Q4G0T1 1027 aa12.72□□□□□ -0.37
USP35-207ENST00000530546 CCDC40Q4G0X9 1142 aa12.72□□□□□ -0.37
USP35-207ENST00000530546 ARSHQ5FYA8 562 aa12.72□□□□□ -0.37
USP35-207ENST00000530546 VCPKMTQ9H867 229 aa12.72□□□□□ -0.37
USP35-207ENST00000530546 CTAGE15A4D2H0 777 aa12.72□□□□□ -0.37
USP35-207ENST00000530546 LRRIQ3A6PVS8 624 aaPredicted RBP12.72□□□□□ -0.37
USP35-207ENST00000530546 FGFR1OPO95684 399 aaKnown RBP12.72□□□□□ -0.37
USP35-207ENST00000530546 CTAGE8P0CG41 777 aa12.72□□□□□ -0.37
USP35-207ENST00000530546 CAP2P40123 477 aa12.72□□□□□ -0.37
USP35-207ENST00000530546 LRRC63Q05C16 580 aa12.72□□□□□ -0.37
USP35-207ENST00000530546 MAP9Q49MG5 647 aa12.72□□□□□ -0.37
USP35-207ENST00000530546 KCNV1Q6PIU1 500 aa12.72□□□□□ -0.37
USP35-207ENST00000530546 MOXD1Q6UVY6 613 aa12.72□□□□□ -0.37
USP35-207ENST00000530546 CTAGE6Q86UF2 777 aa12.72□□□□□ -0.37
USP35-207ENST00000530546 CTAGE4Q8IX94 777 aa12.72□□□□□ -0.37
USP35-207ENST00000530546 DNAJC7Q99615 494 aa12.72□□□□□ -0.37
USP35-207ENST00000530546 DNM3Q9UQ16 869 aa12.72□□□□□ -0.37
USP35-207ENST00000530546 REXO2Q9Y3B8 237 aaKnown RBP12.72□□□□□ -0.37
USP35-207ENST00000530546 FAM169AQ9Y6X4 670 aa12.72□□□□□ -0.37
USP35-207ENST00000530546 SMCHD1A6NHR9 2005 aa12.72□□□□□ -0.37
USP35-207ENST00000530546 GCOM1H8Y6P7 765 aaPredicted RBP12.72□□□□□ -0.37
USP35-207ENST00000530546 EML1O00423 815 aa12.72□□□□□ -0.37
USP35-207ENST00000530546 EPHB6O15197 1021 aa12.72□□□□□ -0.37
USP35-207ENST00000530546 SYF2O95926 243 aaKnown RBP12.72□□□□□ -0.37
USP35-207ENST00000530546 EGFRP00533 1210 aa12.72□□□□□ -0.37
USP35-207ENST00000530546 POLR2MP0CAP2 368 aa12.72□□□□□ -0.37
USP35-207ENST00000530546 SPATA31C1P0DKV0 1188 aa12.72□□□□□ -0.37
USP35-207ENST00000530546 ARHGAP25P42331 645 aa12.72□□□□□ -0.37
USP35-207ENST00000530546 LIG3P49916 1009 aa12.72□□□□□ -0.37
USP35-207ENST00000530546 DGKZQ13574 1117 aa12.72□□□□□ -0.37
USP35-207ENST00000530546 MAN2A1Q16706 1144 aa12.72□□□□□ -0.37
USP35-207ENST00000530546 GRIPAP1Q4V328 841 aa12.72□□□□□ -0.37
USP35-207ENST00000530546 LRRC55Q6ZSA7 311 aa12.72□□□□□ -0.37
USP35-207ENST00000530546 SMCR8Q8TEV9 937 aaPredicted RBP12.72□□□□□ -0.37
USP35-207ENST00000530546 CHURC1Q8WUH1 139 aa12.72□□□□□ -0.37
USP35-207ENST00000530546 NUP58Q9BVL2 599 aa12.72□□□□□ -0.37
USP35-207ENST00000530546 PLEKHA4Q9H4M7 779 aa12.72□□□□□ -0.37
USP35-207ENST00000530546 BCAS3Q9H6U6 928 aa12.72□□□□□ -0.37
USP35-207ENST00000530546 PIM2Q9P1W9 311 aa12.72□□□□□ -0.37
USP35-207ENST00000530546 CTAGE9A4FU28 777 aa12.71□□□□□ -0.37
USP35-207ENST00000530546 TFRCP02786 760 aaKnown RBP12.71□□□□□ -0.37
USP35-207ENST00000530546 SLC12A3P55017 1021 aa12.71□□□□□ -0.37
USP35-207ENST00000530546 CTTNQ14247 550 aaKnown RBP12.71□□□□□ -0.37
USP35-207ENST00000530546 CIAPIN1Q6FI81 312 aa12.71□□□□□ -0.37
USP35-207ENST00000530546 EP400NLQ6ZTU2 488 aa12.71□□□□□ -0.37
USP35-207ENST00000530546 PRPF38AQ8NAV1 312 aaKnown RBP12.71□□□□□ -0.37
USP35-207ENST00000530546 ZNF341Q9BYN7 854 aa12.71□□□□□ -0.37
USP35-207ENST00000530546 TTYH3Q9C0H2 523 aa12.71□□□□□ -0.37
USP35-207ENST00000530546 ARFGEF1Q9Y6D6 1849 aa12.71□□□□□ -0.37
USP35-207ENST00000530546 ZBED6P86452 979 aa12.71□□□□□ -0.38
USP35-207ENST00000530546 RASA3Q14644 834 aa12.71□□□□□ -0.38
USP35-207ENST00000530546 KIAA1328Q86T90 577 aa12.71□□□□□ -0.38
USP35-207ENST00000530546 AGBL3Q8NEM8 1001 aa12.71□□□□□ -0.38
USP35-207ENST00000530546 PIGOQ8TEQ8 1089 aa12.71□□□□□ -0.38
USP35-207ENST00000530546 JDP2Q8WYK2 163 aa12.71□□□□□ -0.38
USP35-207ENST00000530546 FAM20AQ96MK3 541 aa12.71□□□□□ -0.38
USP35-207ENST00000530546 ERGIC2Q96RQ1 377 aa12.71□□□□□ -0.38
USP35-207ENST00000530546 WDR18Q9BV38 432 aa12.71□□□□□ -0.38
USP35-207ENST00000530546 BHMT2Q9H2M3 363 aa12.71□□□□□ -0.38
USP35-207ENST00000530546 MYOZ2Q9NPC6 264 aa12.71□□□□□ -0.38
USP35-207ENST00000530546 EMILIN3Q9NT22 766 aa12.71□□□□□ -0.38
USP35-207ENST00000530546 PKD2L1Q9P0L9 805 aa12.71□□□□□ -0.38
USP35-207ENST00000530546 RSPH10B2B2RC85 870 aa12.7□□□□□ -0.38
USP35-207ENST00000530546 TBX3O15119 743 aa12.7□□□□□ -0.38
USP35-207ENST00000530546 RSPH10BP0C881 870 aa12.7□□□□□ -0.38
USP35-207ENST00000530546 RPA1P27694 616 aa12.7□□□□□ -0.38
USP35-207ENST00000530546 CASP5P51878 434 aa12.7□□□□□ -0.38
USP35-207ENST00000530546 FKBP3Q00688 224 aaKnown RBP12.7□□□□□ -0.38
USP35-207ENST00000530546 CYP27A1Q02318 531 aa12.7□□□□□ -0.38
USP35-207ENST00000530546 GBP6Q6ZN66 633 aa12.7□□□□□ -0.38
USP35-207ENST00000530546 SCFD1Q8WVM8 642 aa12.7□□□□□ -0.38
USP35-207ENST00000530546 EIF2AK1Q9BQI3 630 aaKnown RBP12.7□□□□□ -0.38
USP35-207ENST00000530546 NHEJ1Q9H9Q4 299 aaPredicted RBP12.7□□□□□ -0.38
USP35-207ENST00000530546 VAV3Q9UKW4 847 aa12.7□□□□□ -0.38
USP35-207ENST00000530546 COL2A1P02458 1487 aaPredicted RBP12.7□□□□□ -0.38
USP35-207ENST00000530546 SFI1A8K8P3 1242 aa12.7□□□□□ -0.38
USP35-207ENST00000530546 PLEKP08567 350 aaPredicted RBP12.7□□□□□ -0.38
USP35-207ENST00000530546 RHOXF2BP0C7M4 288 aa12.7□□□□□ -0.38
USP35-207ENST00000530546 INPP5BP32019 993 aa12.7□□□□□ -0.38
USP35-207ENST00000530546 HERVK_113P62684 666 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms