RNA–Protein interactions for RNA: ENST00000528088.1

CCDC84-205, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-205ENST00000528088 BRDTQ58F21 947 aaPredicted RBP12.5□□□□□ -0.41
CCDC84-205ENST00000528088 TBCKQ8TEA7 893 aa12.5□□□□□ -0.41
CCDC84-205ENST00000528088 COPS5Q92905 334 aa12.5□□□□□ -0.41
CCDC84-205ENST00000528088 TRIM43Q96BQ3 446 aaPredicted RBP12.5□□□□□ -0.41
CCDC84-205ENST00000528088 CDHR1Q96JP9 859 aa12.5□□□□□ -0.41
CCDC84-205ENST00000528088 PRDM5Q9NQX1 630 aaPredicted RBP12.5□□□□□ -0.41
CCDC84-205ENST00000528088 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.49□□□□□ -0.41
CCDC84-205ENST00000528088 BTBD18B2RXH4 712 aa12.49□□□□□ -0.41
CCDC84-205ENST00000528088 ARIH2O95376 493 aa12.49□□□□□ -0.41
CCDC84-205ENST00000528088 GH1P01241 217 aa12.49□□□□□ -0.41
CCDC84-205ENST00000528088 ACLYP53396 1101 aa12.49□□□□□ -0.41
CCDC84-205ENST00000528088 BEX3Q00994 111 aa12.49□□□□□ -0.41
CCDC84-205ENST00000528088 SP4Q02446 784 aa12.49□□□□□ -0.41
CCDC84-205ENST00000528088 CUL4AQ13619 759 aa12.49□□□□□ -0.41
CCDC84-205ENST00000528088 INF2Q27J81 1249 aa12.49□□□□□ -0.41
CCDC84-205ENST00000528088 GNASQ5JWF2 1037 aa12.49□□□□□ -0.41
CCDC84-205ENST00000528088 LARP1BQ659C4 914 aaKnown RBP12.49□□□□□ -0.41
CCDC84-205ENST00000528088 DHX37Q8IY37 1157 aaKnown RBP12.49□□□□□ -0.41
CCDC84-205ENST00000528088 TDHQ8IZJ6 230 aa12.49□□□□□ -0.41
CCDC84-205ENST00000528088 ZNF687Q8N1G0 1237 aa12.49□□□□□ -0.41
CCDC84-205ENST00000528088 FBXO18Q8NFZ0 1043 aa12.49□□□□□ -0.41
CCDC84-205ENST00000528088 VTI1AQ96AJ9 217 aa12.49□□□□□ -0.41
CCDC84-205ENST00000528088 MXRA8Q9BRK3 442 aa12.49□□□□□ -0.41
CCDC84-205ENST00000528088 PPP1R12CQ9BZL4 782 aa12.49□□□□□ -0.41
CCDC84-205ENST00000528088 UPF3AQ9H1J1 476 aaKnown RBP12.49□□□□□ -0.41
CCDC84-205ENST00000528088 MLXIPQ9HAP2 919 aa12.49□□□□□ -0.41
CCDC84-205ENST00000528088 PDLIM7Q9NR12 457 aa12.49□□□□□ -0.41
CCDC84-205ENST00000528088 TCEAL9Q9UHQ7 104 aa12.49□□□□□ -0.41
CCDC84-205ENST00000528088 RBM47A0AV96 593 aaKnown RBP12.48□□□□□ -0.41
CCDC84-205ENST00000528088 VPS37CA5D8V6 355 aaPredicted RBP12.48□□□□□ -0.41
CCDC84-205ENST00000528088 NOP56O00567 594 aaKnown RBP12.48□□□□□ -0.41
CCDC84-205ENST00000528088 ZEB2O60315 1214 aa12.48□□□□□ -0.41
CCDC84-205ENST00000528088 PQBP1O60828 265 aaKnown RBP12.48□□□□□ -0.41
CCDC84-205ENST00000528088 GGPS1O95749 300 aa12.48□□□□□ -0.41
CCDC84-205ENST00000528088 ATP2B1P20020 1258 aa12.48□□□□□ -0.41
CCDC84-205ENST00000528088 UBA1P22314 1058 aaKnown RBP12.48□□□□□ -0.41
CCDC84-205ENST00000528088 CPT1AP50416 773 aa12.48□□□□□ -0.41
CCDC84-205ENST00000528088 GJA9P57773 515 aa12.48□□□□□ -0.41
CCDC84-205ENST00000528088 NPY5RQ15761 445 aa12.48□□□□□ -0.41
CCDC84-205ENST00000528088 FSCN1Q16658 493 aaKnown RBP12.48□□□□□ -0.41
CCDC84-205ENST00000528088 LETM2Q2VYF4 491 aa12.48□□□□□ -0.41
CCDC84-205ENST00000528088 KMT5BQ4FZB7 885 aa12.48□□□□□ -0.41
CCDC84-205ENST00000528088 CEP55Q53EZ4 464 aa12.48□□□□□ -0.41
CCDC84-205ENST00000528088 PRR16Q569H4 304 aa12.48□□□□□ -0.41
CCDC84-205ENST00000528088 C1orf53Q5VUE5 145 aa12.48□□□□□ -0.41
CCDC84-205ENST00000528088 RETREG3Q86VR2 466 aa12.48□□□□□ -0.41
CCDC84-205ENST00000528088 PLA2G4DQ86XP0 818 aa12.48□□□□□ -0.41
CCDC84-205ENST00000528088 BADQ92934 168 aa12.48□□□□□ -0.41
CCDC84-205ENST00000528088 GPRASP2Q96D09 838 aa12.48□□□□□ -0.41
CCDC84-205ENST00000528088 INPP4AQ96PE3 977 aaPredicted RBP12.48□□□□□ -0.41
CCDC84-205ENST00000528088 UIMC1Q96RL1 719 aa12.48□□□□□ -0.41
CCDC84-205ENST00000528088 TSEN34Q9BSV6 310 aaKnown RBP12.48□□□□□ -0.41
CCDC84-205ENST00000528088 JADE2Q9NQC1 790 aa12.48□□□□□ -0.41
CCDC84-205ENST00000528088 DDX41Q9UJV9 622 aaKnown RBP12.48□□□□□ -0.41
CCDC84-205ENST00000528088 GNEQ9Y223 722 aaKnown RBP12.48□□□□□ -0.41
CCDC84-205ENST00000528088 SLC27A5Q9Y2P5 690 aa12.48□□□□□ -0.41
CCDC84-205ENST00000528088 MARCH6O60337 910 aa12.47□□□□□ -0.41
CCDC84-205ENST00000528088 RGS20O76081 388 aa12.47□□□□□ -0.41
CCDC84-205ENST00000528088 ASGR1P07306 291 aa12.47□□□□□ -0.41
CCDC84-205ENST00000528088 MYL3P08590 195 aa12.47□□□□□ -0.41
CCDC84-205ENST00000528088 TGFB3P10600 412 aa12.47□□□□□ -0.41
CCDC84-205ENST00000528088 ITGB5P18084 799 aa12.47□□□□□ -0.41
CCDC84-205ENST00000528088 PDCP20941 246 aa12.47□□□□□ -0.41
CCDC84-205ENST00000528088 CST5P28325 142 aaPredicted RBP12.47□□□□□ -0.41
CCDC84-205ENST00000528088 CHMP4BP1P59074 171 aa12.47□□□□□ -0.41
CCDC84-205ENST00000528088 SETQ01105 290 aaPredicted RBP12.47□□□□□ -0.41
CCDC84-205ENST00000528088 NEDD9Q14511 834 aa12.47□□□□□ -0.41
CCDC84-205ENST00000528088 CCDC62Q6P9F0 684 aa12.47□□□□□ -0.41
CCDC84-205ENST00000528088 CYFIP1Q7L576 1253 aa12.47□□□□□ -0.41
CCDC84-205ENST00000528088 NEK8Q86SG6 692 aa12.47□□□□□ -0.41
CCDC84-205ENST00000528088 PCSK9Q8NBP7 692 aaKnown RBP12.47□□□□□ -0.41
CCDC84-205ENST00000528088 CYP2W1Q8TAV3 490 aa12.47□□□□□ -0.41
CCDC84-205ENST00000528088 INTS4Q96HW7 963 aaKnown RBP12.47□□□□□ -0.41
CCDC84-205ENST00000528088 SPATA33Q96N06 139 aa12.47□□□□□ -0.41
CCDC84-205ENST00000528088 SDF4Q9BRK5 362 aa12.47□□□□□ -0.41
CCDC84-205ENST00000528088 STARD7Q9NQZ5 370 aa12.47□□□□□ -0.41
CCDC84-205ENST00000528088 PRKAG2Q9UGJ0 569 aa12.47□□□□□ -0.41
CCDC84-205ENST00000528088 UBIAD1Q9Y5Z9 338 aa12.47□□□□□ -0.41
CCDC84-205ENST00000528088 SPATA31C2B4DYI2 1134 aa12.46□□□□□ -0.41
CCDC84-205ENST00000528088 M0R2N6 131 aa12.46□□□□□ -0.41
CCDC84-205ENST00000528088 DDX39AO00148 427 aaKnown RBP12.46□□□□□ -0.41
CCDC84-205ENST00000528088 CCNT1O60563 726 aaKnown RBP12.46□□□□□ -0.41
CCDC84-205ENST00000528088 TDP2O95551 362 aa12.46□□□□□ -0.41
CCDC84-205ENST00000528088 CYP3A4P08684 503 aa12.46□□□□□ -0.41
CCDC84-205ENST00000528088 ICAM3P32942 547 aa12.46□□□□□ -0.41
CCDC84-205ENST00000528088 USP11P51784 963 aa12.46□□□□□ -0.41
CCDC84-205ENST00000528088 EMP3P54852 163 aa12.46□□□□□ -0.41
CCDC84-205ENST00000528088 LAMC2Q13753 1193 aa12.46□□□□□ -0.41
CCDC84-205ENST00000528088 GIMAP8Q8ND71 665 aaPredicted RBP12.46□□□□□ -0.41
CCDC84-205ENST00000528088 AFG1LQ8WV93 481 aa12.46□□□□□ -0.41
CCDC84-205ENST00000528088 MARVELD3Q96A59 401 aa12.46□□□□□ -0.41
CCDC84-205ENST00000528088 UCN2Q96RP3 112 aa12.46□□□□□ -0.41
CCDC84-205ENST00000528088 LBHD1Q9BQE6 289 aaPredicted RBP12.46□□□□□ -0.41
CCDC84-205ENST00000528088 ZNF577Q9BSK1 485 aa12.46□□□□□ -0.41
CCDC84-205ENST00000528088 KCNH7Q9NS40 1196 aa12.46□□□□□ -0.41
CCDC84-205ENST00000528088 NOL7Q9UMY1 257 aaKnown RBP12.46□□□□□ -0.41
CCDC84-205ENST00000528088 Q9Y3F1 56 aa12.46□□□□□ -0.41
CCDC84-205ENST00000528088 FAM205CA6NFA0 338 aa12.46□□□□□ -0.42
CCDC84-205ENST00000528088 FAM86B1E9PN63 330 aa12.46□□□□□ -0.42
CCDC84-205ENST00000528088 MAFGO15525 162 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 165.5 ms