RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 STOX1Q6ZVD7 989 aa20.35■□□□□ 0.85
PVT1-220ENST00000524165 RSPH3Q86UC2 560 aa20.35■□□□□ 0.85
PVT1-220ENST00000524165 CCDC105Q8IYK2 499 aa20.35■□□□□ 0.85
PVT1-220ENST00000524165 KIAA2013Q8IYS2 634 aa20.35■□□□□ 0.85
PVT1-220ENST00000524165 ADGRF4Q8IZF3 695 aa20.35■□□□□ 0.85
PVT1-220ENST00000524165 DLL3Q9NYJ7 618 aa20.35■□□□□ 0.85
PVT1-220ENST00000524165 ZFHX4Q86UP3 3567 aa20.35■□□□□ 0.85
PVT1-220ENST00000524165 C2CD4DB7Z1M9 353 aa20.34■□□□□ 0.85
PVT1-220ENST00000524165 FSCN2O14926 492 aa20.34■□□□□ 0.85
PVT1-220ENST00000524165 AOC1P19801 751 aa20.34■□□□□ 0.85
PVT1-220ENST00000524165 ERVFC1P60507 584 aa20.34■□□□□ 0.85
PVT1-220ENST00000524165 PGM5Q15124 567 aa20.34■□□□□ 0.85
PVT1-220ENST00000524165 QRICH1Q2TAL8 776 aa20.34■□□□□ 0.85
PVT1-220ENST00000524165 TSHZ3Q63HK5 1081 aa20.34■□□□□ 0.85
PVT1-220ENST00000524165 CWF19L1Q69YN2 538 aaKnown RBP20.34■□□□□ 0.85
PVT1-220ENST00000524165 RTN4RL1Q86UN2 441 aaPredicted RBP20.34■□□□□ 0.85
PVT1-220ENST00000524165 KCNG4Q8TDN1 519 aa20.34■□□□□ 0.85
PVT1-220ENST00000524165 NECTIN4Q96NY8 510 aa20.34■□□□□ 0.85
PVT1-220ENST00000524165 SMOC2Q9H3U7 446 aa20.34■□□□□ 0.85
PVT1-220ENST00000524165 AAASQ9NRG9 546 aa20.34■□□□□ 0.85
PVT1-220ENST00000524165 DDX19BQ9UMR2 479 aa20.34■□□□□ 0.85
PVT1-220ENST00000524165 MS4A1P11836 297 aa20.33■□□□□ 0.85
PVT1-220ENST00000524165 RUFY4Q6ZNE9 571 aa20.33■□□□□ 0.85
PVT1-220ENST00000524165 GPKOWQ92917 476 aaPredicted RBP eCLIP20.33■□□□□ 0.85
PVT1-220ENST00000524165 GPR20Q99678 358 aa20.33■□□□□ 0.85
PVT1-220ENST00000524165 SUPT16HQ9Y5B9 1047 aaKnown RBP20.33■□□□□ 0.85
PVT1-220ENST00000524165 SQORQ9Y6N5 450 aa20.33■□□□□ 0.85
PVT1-220ENST00000524165 CHD6Q8TD26 2715 aa20.33■□□□□ 0.85
PVT1-220ENST00000524165 OPLAHO14841 1288 aa20.32■□□□□ 0.84
PVT1-220ENST00000524165 FGF18O76093 207 aa20.32■□□□□ 0.84
PVT1-220ENST00000524165 ALX1Q15699 326 aa20.32■□□□□ 0.84
PVT1-220ENST00000524165 METTL7BQ6UX53 244 aa20.32■□□□□ 0.84
PVT1-220ENST00000524165 SAMD3Q8N6K7 520 aa20.32■□□□□ 0.84
PVT1-220ENST00000524165 FLCNQ8NFG4 579 aa20.32■□□□□ 0.84
PVT1-220ENST00000524165 APOL5Q9BWW9 433 aa20.32■□□□□ 0.84
PVT1-220ENST00000524165 POMKQ9H5K3 350 aa20.32■□□□□ 0.84
PVT1-220ENST00000524165 BCAS3Q9H6U6 928 aa20.32■□□□□ 0.84
PVT1-220ENST00000524165 AGO3Q9H9G7 860 aaKnown RBP20.32■□□□□ 0.84
PVT1-220ENST00000524165 BAHCC1Q9P281 2608 aa20.31■□□□□ 0.84
PVT1-220ENST00000524165 FANCMQ8IYD8 2048 aa20.31■□□□□ 0.84
PVT1-220ENST00000524165 SCG2P13521 617 aa20.31■□□□□ 0.84
PVT1-220ENST00000524165 CCND2P30279 289 aa20.31■□□□□ 0.84
PVT1-220ENST00000524165 CD52P31358 61 aa20.31■□□□□ 0.84
PVT1-220ENST00000524165 NEDD9Q14511 834 aa20.31■□□□□ 0.84
PVT1-220ENST00000524165 TPRNQ4KMQ1 711 aa20.31■□□□□ 0.84
PVT1-220ENST00000524165 TRIM50Q86XT4 487 aa20.31■□□□□ 0.84
PVT1-220ENST00000524165 ZDHHC14Q8IZN3 488 aa20.31■□□□□ 0.84
PVT1-220ENST00000524165 IL31RAQ8NI17 732 aa20.31■□□□□ 0.84
PVT1-220ENST00000524165 RTP3Q9BQQ7 232 aa20.31■□□□□ 0.84
PVT1-220ENST00000524165 CDY2AQ9Y6F7 541 aa20.31■□□□□ 0.84
PVT1-220ENST00000524165 SPTBN2O15020 2390 aa20.31■□□□□ 0.84
PVT1-220ENST00000524165 MAP1BP46821 2468 aaKnown RBP20.31■□□□□ 0.84
PVT1-220ENST00000524165 RPLP2P05387 115 aaKnown RBP20.3■□□□□ 0.84
PVT1-220ENST00000524165 ITIH3Q06033 890 aa20.3■□□□□ 0.84
PVT1-220ENST00000524165 VPS53Q5VIR6 699 aa20.3■□□□□ 0.84
PVT1-220ENST00000524165 CES5AQ6NT32 575 aa20.3■□□□□ 0.84
PVT1-220ENST00000524165 DTWD2Q8NBA8 298 aa20.3■□□□□ 0.84
PVT1-220ENST00000524165 ADAM7Q9H2U9 754 aa20.3■□□□□ 0.84
PVT1-220ENST00000524165 TMEM260Q9NX78 707 aa20.3■□□□□ 0.84
PVT1-220ENST00000524165 LZTS1Q9Y250 596 aa20.3■□□□□ 0.84
PVT1-220ENST00000524165 CFAP47Q6ZTR5 3102 aa20.29■□□□□ 0.84
PVT1-220ENST00000524165 PI15O43692 258 aa20.29■□□□□ 0.84
PVT1-220ENST00000524165 ASGR2P07307 311 aa20.29■□□□□ 0.84
PVT1-220ENST00000524165 NPR3P17342 541 aa20.29■□□□□ 0.84
PVT1-220ENST00000524165 GATMP50440 423 aa20.29■□□□□ 0.84
PVT1-220ENST00000524165 GNPTABQ3T906 1256 aa20.29■□□□□ 0.84
PVT1-220ENST00000524165 SPOUT1Q5T280 376 aaKnown RBP20.29■□□□□ 0.84
PVT1-220ENST00000524165 LLGL2Q6P1M3 1020 aa20.29■□□□□ 0.84
PVT1-220ENST00000524165 CYFIP1Q7L576 1253 aa20.29■□□□□ 0.84
PVT1-220ENST00000524165 DNAJB3Q8WWF6 145 aa20.29■□□□□ 0.84
PVT1-220ENST00000524165 CASP10Q92851 521 aa20.29■□□□□ 0.84
PVT1-220ENST00000524165 AMNQ9BXJ7 453 aa20.29■□□□□ 0.84
PVT1-220ENST00000524165 CHMP4BQ9H444 224 aaKnown RBP20.29■□□□□ 0.84
PVT1-220ENST00000524165 LRFN2Q9ULH4 789 aa20.29■□□□□ 0.84
PVT1-220ENST00000524165 MBLAC1A4D2B0 266 aaPredicted RBP20.28■□□□□ 0.84
PVT1-220ENST00000524165 PCP11498 1178 aaKnown RBP20.28■□□□□ 0.84
PVT1-220ENST00000524165 MRPS6P82932 125 aaKnown RBP20.28■□□□□ 0.84
PVT1-220ENST00000524165 ASPRV1Q53RT3 343 aa20.28■□□□□ 0.84
PVT1-220ENST00000524165 UTP14CQ5TAP6 766 aaKnown RBP20.28■□□□□ 0.84
PVT1-220ENST00000524165 DGKHQ86XP1 1220 aa20.28■□□□□ 0.84
PVT1-220ENST00000524165 THNSL1Q8IYQ7 743 aa20.28■□□□□ 0.84
PVT1-220ENST00000524165 PLCD3Q8N3E9 789 aa20.28■□□□□ 0.84
PVT1-220ENST00000524165 JMJD4Q9H9V9 463 aa20.28■□□□□ 0.84
PVT1-220ENST00000524165 TUBE1Q9UJT0 475 aa20.28■□□□□ 0.84
PVT1-220ENST00000524165 TTC41PQ6P2S7 1318 aa20.27■□□□□ 0.84
PVT1-220ENST00000524165 STAM2O75886 525 aa20.27■□□□□ 0.84
PVT1-220ENST00000524165 MTHFRP42898 656 aa20.27■□□□□ 0.84
PVT1-220ENST00000524165 PLPP4Q5VZY2 271 aa20.27■□□□□ 0.84
PVT1-220ENST00000524165 FAM43BQ6ZT52 329 aaPredicted RBP20.27■□□□□ 0.84
PVT1-220ENST00000524165 TDRD5Q8NAT2 981 aaKnown RBP20.27■□□□□ 0.84
PVT1-220ENST00000524165 PNMA1Q8ND90 353 aa20.27■□□□□ 0.84
PVT1-220ENST00000524165 CYP2W1Q8TAV3 490 aa20.27■□□□□ 0.84
PVT1-220ENST00000524165 ZFP91Q96JP5 570 aaPredicted RBP20.27■□□□□ 0.84
PVT1-220ENST00000524165 NGRNQ9NPE2 291 aaKnown RBP20.27■□□□□ 0.84
PVT1-220ENST00000524165 LIMD1Q9UGP4 676 aa20.27■□□□□ 0.84
PVT1-220ENST00000524165 CDH22Q9UJ99 828 aa20.27■□□□□ 0.84
PVT1-220ENST00000524165 SPATA31C2B4DYI2 1134 aa20.26■□□□□ 0.83
PVT1-220ENST00000524165 DHX16O60231 1041 aaKnown RBP20.26■□□□□ 0.83
PVT1-220ENST00000524165 FGAP02671 866 aa20.26■□□□□ 0.83
PVT1-220ENST00000524165 HOXA13P31271 388 aaPredicted RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms