RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 PCDHGB2Q9Y5G2 931 aa4.7□□□□□ -1.66
SKP1-209ENST00000522552 TISP43B9A030 160 aa4.7□□□□□ -1.66
SKP1-209ENST00000522552 B9A039 149 aa4.7□□□□□ -1.66
SKP1-209ENST00000522552 H7C1W4 665 aa4.7□□□□□ -1.66
SKP1-209ENST00000522552 TBX18O95935 607 aa4.7□□□□□ -1.66
SKP1-209ENST00000522552 EIF2AK2P19525 551 aaKnown RBP4.7□□□□□ -1.66
SKP1-209ENST00000522552 PDCP20941 246 aa4.7□□□□□ -1.66
SKP1-209ENST00000522552 AGXTP21549 392 aa4.7□□□□□ -1.66
SKP1-209ENST00000522552 HOXC13P31276 330 aa4.7□□□□□ -1.66
SKP1-209ENST00000522552 ATICP31939 592 aa4.7□□□□□ -1.66
SKP1-209ENST00000522552 KRT9P35527 623 aa4.7□□□□□ -1.66
SKP1-209ENST00000522552 TECP42680 631 aa4.7□□□□□ -1.66
SKP1-209ENST00000522552 CACNB2Q08289 660 aaPredicted RBP4.7□□□□□ -1.66
SKP1-209ENST00000522552 CCNG2Q16589 344 aa4.7□□□□□ -1.66
SKP1-209ENST00000522552 HSF5Q4G112 596 aaPredicted RBP4.7□□□□□ -1.66
SKP1-209ENST00000522552 EFHC2Q5JST6 749 aa4.7□□□□□ -1.66
SKP1-209ENST00000522552 TTLL7Q6ZT98 887 aa4.7□□□□□ -1.66
SKP1-209ENST00000522552 CACNA2D3Q8IZS8 1091 aa4.7□□□□□ -1.66
SKP1-209ENST00000522552 ZNF527Q8NB42 609 aa4.7□□□□□ -1.66
SKP1-209ENST00000522552 PCYOX1LQ8NBM8 494 aa4.7□□□□□ -1.66
SKP1-209ENST00000522552 KREMEN2Q8NCW0 462 aa4.7□□□□□ -1.66
SKP1-209ENST00000522552 PCDH19Q8TAB3 1148 aa4.7□□□□□ -1.66
SKP1-209ENST00000522552 ADAMTS18Q8TE60 1221 aa4.7□□□□□ -1.66
SKP1-209ENST00000522552 TRAPPC12Q8WVT3 735 aa4.7□□□□□ -1.66
SKP1-209ENST00000522552 LRTOMTQ8WZ04 291 aa4.7□□□□□ -1.66
SKP1-209ENST00000522552 FERMT2Q96AC1 680 aa4.7□□□□□ -1.66
SKP1-209ENST00000522552 WDR89Q96FK6 387 aaPredicted RBP4.7□□□□□ -1.66
SKP1-209ENST00000522552 ORAI2Q96SN7 254 aa4.7□□□□□ -1.66
SKP1-209ENST00000522552 DPH2Q9BQC3 489 aaPredicted RBP4.7□□□□□ -1.66
SKP1-209ENST00000522552 USP26Q9BXU7 913 aa4.7□□□□□ -1.66
SKP1-209ENST00000522552 LACRTQ9GZZ8 138 aa4.7□□□□□ -1.66
SKP1-209ENST00000522552 CD248Q9HCU0 757 aa4.7□□□□□ -1.66
SKP1-209ENST00000522552 DNAJC28Q9NX36 388 aa4.7□□□□□ -1.66
SKP1-209ENST00000522552 PPARGC1AQ9UBK2 798 aaKnown RBP4.7□□□□□ -1.66
SKP1-209ENST00000522552 MAGED2Q9UNF1 606 aaPredicted RBP4.7□□□□□ -1.66
SKP1-209ENST00000522552 NOC2LQ9Y3T9 749 aaKnown RBP4.7□□□□□ -1.66
SKP1-209ENST00000522552 CAPN8A6NHC0 703 aa4.69□□□□□ -1.66
SKP1-209ENST00000522552 ADAMTS3O15072 1205 aa4.69□□□□□ -1.66
SKP1-209ENST00000522552 MGEA5O60502 916 aa4.69□□□□□ -1.66
SKP1-209ENST00000522552 ALDH2P05091 517 aa4.69□□□□□ -1.66
SKP1-209ENST00000522552 CYP11A1P05108 521 aa4.69□□□□□ -1.66
SKP1-209ENST00000522552 POLBP06746 335 aa4.69□□□□□ -1.66
SKP1-209ENST00000522552 ATP1A3P13637 1013 aa4.69□□□□□ -1.66
SKP1-209ENST00000522552 XPAP23025 273 aaPredicted RBP4.69□□□□□ -1.66
SKP1-209ENST00000522552 PDIA3P30101 505 aaKnown RBP4.69□□□□□ -1.66
SKP1-209ENST00000522552 AGFG1P52594 562 aaKnown RBP4.69□□□□□ -1.66
SKP1-209ENST00000522552 GPR85P60893 370 aa4.69□□□□□ -1.66
SKP1-209ENST00000522552 PHC1P78364 1004 aa4.69□□□□□ -1.66
SKP1-209ENST00000522552 ALDH6A1Q02252 535 aaKnown RBP4.69□□□□□ -1.66
SKP1-209ENST00000522552 GSTM4Q03013 218 aa4.69□□□□□ -1.66
SKP1-209ENST00000522552 TNP2Q05952 138 aa4.69□□□□□ -1.66
SKP1-209ENST00000522552 RING1Q06587 406 aa4.69□□□□□ -1.66
SKP1-209ENST00000522552 WASHC5Q12768 1159 aa4.69□□□□□ -1.66
SKP1-209ENST00000522552 AUHQ13825 339 aaKnown RBP4.69□□□□□ -1.66
SKP1-209ENST00000522552 GAS6Q14393 721 aa4.69□□□□□ -1.66
SKP1-209ENST00000522552 PPP2R5DQ14738 602 aa4.69□□□□□ -1.66
SKP1-209ENST00000522552 POSTNQ15063 836 aa4.69□□□□□ -1.66
SKP1-209ENST00000522552 TAF5Q15542 800 aa4.69□□□□□ -1.66
SKP1-209ENST00000522552 PGS1Q32NB8 556 aa4.69□□□□□ -1.66
SKP1-209ENST00000522552 ANO6Q4KMQ2 910 aa4.69□□□□□ -1.66
SKP1-209ENST00000522552 PGBD2Q6P3X8 592 aa4.69□□□□□ -1.66
SKP1-209ENST00000522552 RFX8Q6ZV50 586 aa4.69□□□□□ -1.66
SKP1-209ENST00000522552 HEATR4Q86WZ0 1026 aa4.69□□□□□ -1.66
SKP1-209ENST00000522552 COL23A1Q86Y22 540 aaPredicted RBP4.69□□□□□ -1.66
SKP1-209ENST00000522552 MRPL41Q8IXM3 137 aaKnown RBP4.69□□□□□ -1.66
SKP1-209ENST00000522552 PRR18Q8N4B5 295 aa4.69□□□□□ -1.66
SKP1-209ENST00000522552 ZNF713Q8N859 430 aaPredicted RBP4.69□□□□□ -1.66
SKP1-209ENST00000522552 ASB12Q8WXK4 309 aa4.69□□□□□ -1.66
SKP1-209ENST00000522552 CENPIQ92674 756 aaPredicted RBP4.69□□□□□ -1.66
SKP1-209ENST00000522552 PHKBQ93100 1093 aa4.69□□□□□ -1.66
SKP1-209ENST00000522552 TMEM41AQ96HV5 264 aa4.69□□□□□ -1.66
SKP1-209ENST00000522552 ZFYVE21Q9BQ24 234 aa4.69□□□□□ -1.66
SKP1-209ENST00000522552 LMAN2LQ9H0V9 348 aa4.69□□□□□ -1.66
SKP1-209ENST00000522552 BRD9Q9H8M2 597 aa4.69□□□□□ -1.66
SKP1-209ENST00000522552 ZCCHC17Q9NP64 241 aaKnown RBP4.69□□□□□ -1.66
SKP1-209ENST00000522552 STARD7Q9NQZ5 370 aa4.69□□□□□ -1.66
SKP1-209ENST00000522552 ZNF277Q9NRM2 450 aaPredicted RBP4.69□□□□□ -1.66
SKP1-209ENST00000522552 TUBD1Q9UJT1 453 aa4.69□□□□□ -1.66
SKP1-209ENST00000522552 HIF3AQ9Y2N7 669 aa4.69□□□□□ -1.66
SKP1-209ENST00000522552 GPR55Q9Y2T6 319 aaPredicted RBP4.69□□□□□ -1.66
SKP1-209ENST00000522552 LCHNA4D1U4 455 aa4.68□□□□□ -1.66
SKP1-209ENST00000522552 NDUFS2O75306 463 aa4.68□□□□□ -1.66
SKP1-209ENST00000522552 MAPTP10636 758 aaKnown RBP4.68□□□□□ -1.66
SKP1-209ENST00000522552 OSMP13725 252 aa4.68□□□□□ -1.66
SKP1-209ENST00000522552 EPHA1P21709 976 aa4.68□□□□□ -1.66
SKP1-209ENST00000522552 SCP2P22307 547 aa4.68□□□□□ -1.66
SKP1-209ENST00000522552 CNTFP26441 200 aa4.68□□□□□ -1.66
SKP1-209ENST00000522552 HTR1BP28222 390 aa4.68□□□□□ -1.66
SKP1-209ENST00000522552 ARL4CP56559 192 aa4.68□□□□□ -1.66
SKP1-209ENST00000522552 ZNF445P59923 1031 aa4.68□□□□□ -1.66
SKP1-209ENST00000522552 SRSF2Q01130 221 aaKnown RBP4.68□□□□□ -1.66
SKP1-209ENST00000522552 KIF23Q02241 960 aaPredicted RBP4.68□□□□□ -1.66
SKP1-209ENST00000522552 GALNT1Q10472 559 aaPredicted RBP4.68□□□□□ -1.66
SKP1-209ENST00000522552 PRKG1Q13976 671 aa4.68□□□□□ -1.66
SKP1-209ENST00000522552 STARD3Q14849 445 aa4.68□□□□□ -1.66
SKP1-209ENST00000522552 UAP1L1Q3KQV9 507 aa4.68□□□□□ -1.66
SKP1-209ENST00000522552 ZC3H12AQ5D1E8 599 aaKnown RBP4.68□□□□□ -1.66
SKP1-209ENST00000522552 GGT6Q6P531 493 aa4.68□□□□□ -1.66
SKP1-209ENST00000522552 FOXR1Q6PIV2 292 aa4.68□□□□□ -1.66
SKP1-209ENST00000522552 FIGNL1Q6PIW4 674 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms